Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021686
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 73 2e-13
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 72 4e-13
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 68 5e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 55 4e-08
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 47 1e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 44 9e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 1e-04
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 42 5e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 42 5e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 41 7e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 41 7e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 41 9e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 41 9e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 41 9e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 40 0.001
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 40 0.001
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 40 0.001
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 40 0.002
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 40 0.002
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 38 0.005
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 38 0.005
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 38 0.008
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 38 0.008
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.008
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 36 0.025
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 36 0.025
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 35 0.044
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 33 0.18
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 33 0.23
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.71
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 29 2.9
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 2.9
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 2.9
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.0
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 5.0
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 6.6
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/49 (61%), Positives = 42/49 (85%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
++++G+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELA 390
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 431
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 432 GVKTMGYKEPTPIQAQGWPIAMSGKN 509
+K Y +PT IQAQ P MSG++
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRD 343
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 71.7 bits (168), Expect = 4e-13
Identities = 28/49 (57%), Positives = 43/49 (87%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELA 351
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 434
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 435 VKTMGYKEPTPIQAQGWPIAMSGKN*LA*LK----RVPAKRWP 551
++ Y++PTPIQA P A+SG++ L K + A WP
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/49 (59%), Positives = 40/49 (81%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
++++ +A+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELA
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELA 215
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/84 (34%), Positives = 51/84 (60%)
Frame = +3
Query: 258 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 437
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 438 KTMGYKEPTPIQAQGWPIAMSGKN 509
+++PT IQ+ WPIAMSG++
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRD 168
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +3
Query: 336 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRD 340
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/53 (49%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELA 649
++++GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELA
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELA 391
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 607
+ NG ++ S ++ +GV+QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 608 ---GPIALVLAPTRELA 649
P LVL+PTRELA
Sbjct: 160 QKPSPFVLVLSPTRELA 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Frame = +3
Query: 252 FVSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 410
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 411 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKN 509
+ G ++ G+++P+PIQ+Q WP+ +SG++
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQD 123
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 607
K G+ A + + ++++G+A TGSGKT+ ++LP ++ Q P R +
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 608 GPIALVLAPTRELA 649
GP L++ P+RELA
Sbjct: 266 GPFGLIIVPSRELA 279
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 649
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 235
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 345 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 649
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 219
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 345 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 649
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 216
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 345 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELA 649
+++G A+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELA 472
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +2
Query: 437 KDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 616
KDN + +A S ++VG A+TGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 617 ALVLAPTRELA 649
AL+++PTRELA
Sbjct: 151 ALIISPTRELA 161
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIAL 622
G ++ + S ++ + K ++G A+TGSGKT A+++P + + + G GP A+
Sbjct: 108 GWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAV 167
Query: 623 VLAPTREL 646
++APT+EL
Sbjct: 168 IIAPTKEL 175
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 354 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
V +G +V PI F + + +++++ +KT GY PTP+Q P G++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRD 205
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 11/60 (18%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELA 649
++L+ AQTGSGKT A+++P + I P R+ P ALVL+PTREL+
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +2
Query: 434 CKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 613
C+ G + + L + K+++G+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 614 IALVLAPTRELA 649
LVL PTRELA
Sbjct: 114 FCLVLTPTRELA 125
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/49 (40%), Positives = 37/49 (75%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
K+++ A+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELS 153
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELA 649
K+++ AQTGSGKT A++LP + + + + G +G P ++L PTRELA
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 461 DAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPA 565
D Y++ + +D +V K +V VAQ TLA I+ A
Sbjct: 551 DTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSA 585
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELA 649
K+++ AQTGSGKT A++LP + + + + G +G P ++L PTRELA
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 461 DAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPA 565
D Y++ + +D +V K +V VAQ TLA I+ A
Sbjct: 551 DTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSA 585
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTREL 646
++++G A+TGSGKTLA+ +P + + + + GP AL++APTREL
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTREL 80
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTREL 646
++++G A+TGSGKTLA+ +P + + + + GP AL++APTREL
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTREL 247
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 414 PDYVQQGVKTMGYKEPTPIQAQGWPIAM 497
P+ V + ++ MG+ EPT IQ+ P A+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAV 190
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
+++G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELA 170
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
+++G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELA 170
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELA 649
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELA 649
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELA 649
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTREL 646
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTREL 641
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTREL 646
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTREL 641
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTREL 646
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTREL 641
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
K++V +++TGSGKT A+++P + + R G AL+++PTRELA
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELA 106
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 378 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
K++V +++TGSGKT A+++P + + R G AL+++PTRELA
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELA 106
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 378 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 625
G ++ A + K+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 626 LAPTRELA 649
+APTRELA
Sbjct: 103 MAPTRELA 110
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 625
G ++ A + K+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 626 LAPTRELA 649
+APTRELA
Sbjct: 103 MAPTRELA 110
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTREL 646
++V A TGSGKTLA+++P ++ + ++ P L++APTREL
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTREL 826
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTREL 646
++V A TGSGKTLA+++P ++ + ++ P L++APTREL
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTREL 826
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
K++ A TG+GKT A++LP + + +P + LVL PTRELA
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELA 232
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
FE+ N + + GY +PTPIQ P+A++GK+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKD 187
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 506 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 646
++V + TGSGKTLA++LP + I N G AL+L+P+REL
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSREL 92
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = +2
Query: 440 DNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 619
+ G ++ + + + ++++ A+ G+GKT AY +P I I QP ++ A
Sbjct: 60 EKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---A 114
Query: 620 LVLAPTRELA 649
+V+ PTRELA
Sbjct: 115 MVIVPTRELA 124
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.1 bits (77), Expect = 0.044
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +2
Query: 431 RCKDNGLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPA---IVHINNQPPIRR 601
R +N +++ + + ++ A TGSGKTLA+ LP I+ + +
Sbjct: 140 RLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSS 199
Query: 602 GDGP--IALVLAPTRELA 649
+ +A+VL PTRELA
Sbjct: 200 SNSSKLLAVVLEPTRELA 217
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +2
Query: 446 GLQRTDAYSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 625
G ++ A + ++++ AQ+G+GKT + + + ++ Q +R AL+
Sbjct: 45 GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALI 99
Query: 626 LAPTRELA 649
L+PTRELA
Sbjct: 100 LSPTRELA 107
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
++++ AQ+G+GKT + + + ++ Q +R AL+L+PTRELA
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELA 107
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 503 KELVGVAQTGSGKTLAYILPAIVHINNQP 589
+++ A TGSGKT+ Y+LP + + ++P
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 98 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 214
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 509 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
L+ AQ+G+GKT A++L + I+ P + LAPT ELA
Sbjct: 251 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELA 292
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 509 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
L+ AQ+G+GKT A++L + I+ P + LAPT ELA
Sbjct: 276 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELA 317
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 509 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 649
L+ AQ+G+GKT A++L + I+ P + LAPT ELA
Sbjct: 660 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELA 701
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 527 TGSGKTLAYILPAIVH 574
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 521 AQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTREL 646
A TG GKT A+++PAI + + +P I P L+LA T L
Sbjct: 136 APTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSL 181
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -1
Query: 509 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 330
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 329 D 327
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -1
Query: 509 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 330
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 329 D 327
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 150 RIIAEFVASSKFGTTVSTAIIPV 82
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 150 RIIAEFVASSKFGTTVSTAIIPV 82
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -1
Query: 500 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 321
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 320 W*SFENCRMWIIKVF 276
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 226 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 125
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 291 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 449
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 291 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 449
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,884,803
Number of Sequences: 27780
Number of extensions: 284896
Number of successful extensions: 962
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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