Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021685
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   3.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   3.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   3.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.0  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 38  EQVWRHAPPRVREDYERLQQNCQTQQESV 124
           E  W++    +REDY RL + C+   E +
Sbjct: 263 ESAWKN----LREDYNRLCRLCKRVDEEI 287


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 38  EQVWRHAPPRVREDYERLQQNCQTQQESV 124
           E  W++    +REDY RL + C+   E +
Sbjct: 263 ESAWKN----LREDYNRLCRLCKRVDEEI 287


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 38  EQVWRHAPPRVREDYERLQQNCQTQQESV 124
           E  W++    +REDY RL + C+   E +
Sbjct: 263 ESAWKN----LREDYNRLCRLCKRVDEEI 287


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 236 LVLDVGDGAVLPPV 195
           LVL VG  A LPPV
Sbjct: 683 LVLQVGTHADLPPV 696


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +1

Query: 532 DEQKLMEAVATVGPVSVAIDASHTSFQLYSSG 627
           D QKL   +A  G     +DAS       SSG
Sbjct: 246 DPQKLAIGIAFYGHAFTLVDASQHDLGSPSSG 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,418
Number of Sequences: 336
Number of extensions: 2958
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)