Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021684
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    26   0.27 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 12/56 (21%), Positives = 22/56 (39%)
 Frame = -1

Query: 376 CSAPLSCCR*SILTVLMPVKKTSRCPTCTKVRASSKCWVNTSGRFQSCHYRCRDAD 209
           C   +  C+ + L  ++P+KK     TC  +  S +C  +       C     + D
Sbjct: 134 CDVEMVSCKDAALRKVVPLKKLCNNGTCEDIGNSHRCHCSDGYSGSYCQTEINECD 189



 Score = 25.4 bits (53), Expect = 0.47
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 88  HPCNRIEDVAQDALEGDAVAKPASNGGKQC 177
           +PC  ++ + QD L   A   P  + GK C
Sbjct: 423 NPCKHLDAICQDKLGDYACYCPPKHTGKNC 452


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -1

Query: 211 DWLYRPDRRAERTVCHRYWLVW 146
           DWLY        T C RYW  W
Sbjct: 100 DWLY--GIFGHETSCTRYWTCW 119


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 413  PAWSCMHQRWTSTRWTLPWQPWCT 484
            P W+     W S+  T PW  W T
Sbjct: 1033 PDWTTKPSTWWSSTTTSPW--WTT 1054


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 418 CWNRNTSLLRW 386
           CWN   S+++W
Sbjct: 371 CWNSTPSIVQW 381


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = -1

Query: 454 PCRCPSLVHT*PCWNRNTSLLRWY*TCSAPLSCC 353
           PC    +  + P   R T LL WY T S     C
Sbjct: 43  PCARKCVKDSVPMTCRYTFLLEWYHTLSKACYDC 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,580
Number of Sequences: 336
Number of extensions: 3984
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)