Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021684
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF162673-1|AAF80461.1| 568|Caenorhabditis elegans CNT-like nucl... 45 6e-05
AF016413-5|AAB65255.1| 568|Caenorhabditis elegans Hypothetical ... 45 6e-05
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 44 1e-04
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL031634-2|CAA21035.1| 351|Caenorhabditis elegans Hypothetical ... 30 1.5
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 29 2.5
U21317-2|AAA62531.3| 729|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical pr... 28 5.9
>AF162673-1|AAF80461.1| 568|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 568
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = -2
Query: 135 SFQGILGYIFYPIAWVMGVP--SSEALQVGSIMATKLVSNEFVA 10
SFQ + GY F+P+A++MG+ S++ L V +M +K NEFVA
Sbjct: 427 SFQMLFGYAFFPLAYIMGITNNSNQTLLVAQLMGSKTAVNEFVA 470
>AF016413-5|AAB65255.1| 568|Caenorhabditis elegans Hypothetical
protein F27E11.1 protein.
Length = 568
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = -2
Query: 135 SFQGILGYIFYPIAWVMGVP--SSEALQVGSIMATKLVSNEFVA 10
SFQ + GY F+P+A++MG+ S++ L V +M +K NEFVA
Sbjct: 427 SFQMLFGYAFFPLAYIMGITNNSNQTLLVAQLMGSKTAVNEFVA 470
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = -2
Query: 135 SFQGILGYIFYPIAWVMGV--PSSEALQVGSIMATKLVSNEFVA 10
+FQ + GY F+P+A++MGV S + L V +M TK NEFVA
Sbjct: 433 TFQMLFGYAFFPLAYMMGVNDNSDQTLLVAQLMGTKTAVNEFVA 476
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = -2
Query: 135 SFQGILGYIFYPIAWVMGV--PSSEALQVGSIMATKLVSNEFVA 10
+FQ + GY F+P+A++MGV S + L V +M TK NEFVA
Sbjct: 413 TFQMLFGYAFFPLAYMMGVNDNSDQTLLVAQLMGTKTAVNEFVA 456
>AL031634-2|CAA21035.1| 351|Caenorhabditis elegans Hypothetical
protein Y32B12C.2 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = -2
Query: 153 WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMM 4
+F +SIS G++ IF+ I V+G S AL V + M + EFV MM
Sbjct: 39 YFNFSISVVGVIANIFHLI--VLGRKSMRALTVNTFMMGIAIC-EFVRMM 85
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/96 (18%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +1
Query: 1 IHHRNELVGNQFGRHDTAHLQCFTGRNTHHPCNRIEDVAQDALEGDAVAKPASNGGKQCV 180
+ H + V ++ T + H + ++ + Q+ + P SNGGK+ +
Sbjct: 322 VQHDHRPVNGNLNHRPKELVESRTITSVHAKSHNVQ-IVQNKISSVPSHLPTSNGGKENL 380
Query: 181 QRG---DQGDKANQHRGNDNGNFETCQKYSPSISKK 279
++ +Q + N + N+ + SP + KK
Sbjct: 381 RQSTPDEQNNNNNNNNDNEKSKLSSSSLSSPGMGKK 416
>U21317-2|AAA62531.3| 729|Caenorhabditis elegans Hypothetical
protein B0495.5 protein.
Length = 729
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 429 IHDHAGTEIRRCCAGTE-HVQHLYRAVADQS 340
IHDH G R G+E H+ H + + DQS
Sbjct: 260 IHDHIGNGFHRYSVGSEWHIPHFEKMLYDQS 290
>Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical
protein C05G5.1 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -2
Query: 162 VTGWFGYSISFQGILGYIFYPIAWVMGV----PSSEALQVGSIMATKLVSNEFVAMM 4
V W SI G G+ YPI MGV P +EA G I+ V F +M
Sbjct: 327 VQWWVILSIFIFGAAGFSIYPIGLEMGVEATFPVAEATSTGLIIMIGQVQGVFYVIM 383
>Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical
protein R02D5.7 protein.
Length = 149
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/45 (26%), Positives = 18/45 (40%)
Frame = +1
Query: 148 KPASNGGKQCVQRGDQGDKANQHRGNDNGNFETCQKYSPSISKKL 282
KP K + K ++ G D +E CQ +P KK+
Sbjct: 97 KPKEKSKKSAKSKKSSKSKKDKKDGEDENGYENCQDMTPDQLKKI 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,761,727
Number of Sequences: 27780
Number of extensions: 389502
Number of successful extensions: 1238
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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