Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021682
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein. 59 1e-08
BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein. 59 1e-08
AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein. 59 1e-08
AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein. 59 1e-08
BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated p... 58 2e-08
Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137... 57 7e-08
BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein pr... 57 7e-08
>BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein.
Length = 905
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +3
Query: 57 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 236
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 237 EVAQTL 254
EV L
Sbjct: 169 EVLHNL 174
Score = 37.5 bits (83), Expect = 0.049
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = +1
Query: 562 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVPECGYFD 687
Q+ +++ + + +++G K V+GTTY +K+++S + GYF+
Sbjct: 274 QMEQSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFE 315
>BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein.
Length = 960
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +3
Query: 57 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 236
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 237 EVAQTL 254
EV L
Sbjct: 169 EVLHNL 174
Score = 37.5 bits (83), Expect = 0.049
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = +1
Query: 562 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVPECGYFD 687
Q+ +++ + + +++G K V+GTTY +K+++S + GYF+
Sbjct: 274 QMEQSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFE 315
>AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein.
Length = 278
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +3
Query: 57 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 236
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 237 EVAQTL 254
EV L
Sbjct: 169 EVLHNL 174
>AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein.
Length = 1077
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +3
Query: 57 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 236
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 237 EVAQTL 254
EV L
Sbjct: 169 EVLHNL 174
Score = 37.5 bits (83), Expect = 0.049
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = +1
Query: 562 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVPECGYFD 687
Q+ +++ + + +++G K V+GTTY +K+++S + GYF+
Sbjct: 274 QMEQSSLYFWDLLEGSEKAVVGTTYKHLKDLLSKLLNSGYFE 315
>BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated
protein 1 protein.
Length = 709
Score = 58.4 bits (135), Expect = 2e-08
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +3
Query: 42 AANAKSEKPASSED--KDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQK 215
AA S+ PA+ + ++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ
Sbjct: 34 AAAPASQHPATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQL 93
Query: 216 VAVAKYDEVAQTL 254
AV+KY EV L
Sbjct: 94 DAVSKYQEVTNNL 106
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 562 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVPECGYFDKT 693
Q A+ HL+ +++GK K V GTTY +KEIV V + YFD T
Sbjct: 206 QYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDST 249
Score = 44.8 bits (101), Expect = 3e-04
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +2
Query: 257 FARDLSKQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLILDCLMQMGSADARTD 436
FA++L + A++ +R AE ++K VL + L ++G + RTD
Sbjct: 108 FAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTD 167
Query: 437 FINGTNGAAKLTEDDLKILDDLY 505
G NG L+E++L +LD+ Y
Sbjct: 168 LKQGLNGVPILSEEELSLLDEFY 190
>Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137
protein.
Length = 649
Score = 56.8 bits (131), Expect = 7e-08
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +3
Query: 96 IRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTL 254
++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ AV+KY EV L
Sbjct: 1 MKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNL 53
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 562 QITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVPECGYFDKT 693
Q A+ HL+ +++GK K V GTTY +KEIV V + YFD T
Sbjct: 153 QYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDST 196
Score = 44.8 bits (101), Expect = 3e-04
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +2
Query: 257 FARDLSKQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLILDCLMQMGSADARTD 436
FA++L + A++ +R AE ++K VL + L ++G + RTD
Sbjct: 55 FAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTD 114
Query: 437 FINGTNGAAKLTEDDLKILDDLY 505
G NG L+E++L +LD+ Y
Sbjct: 115 LKQGLNGVPILSEEELSLLDEFY 137
>BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein
protein.
Length = 173
Score = 56.8 bits (131), Expect = 7e-08
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +3
Query: 57 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 236
S + S+ + I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 74 SSAASPSQAYEAYIENGLICLKHKIRNIEKKKLKLEDYKDHLKSGEHLNPDQLEAVEKYE 133
Query: 237 EVAQTL 254
EV L
Sbjct: 134 EVLHNL 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,831,660
Number of Sequences: 237096
Number of extensions: 1718729
Number of successful extensions: 2906
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2904
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -