Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021680
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 94 1e-19
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 8e-17
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 67 2e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 57 1e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 57 2e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 51 9e-07
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 50 2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 6e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 48 8e-06
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 44 1e-04
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 44 2e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 42 7e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 38 0.007
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 37 0.015
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 36 0.046
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 33 0.19
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 33 0.25
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.3
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 29 5.3
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011) 29 5.3
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 9.3
SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006) 28 9.3
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 28 9.3
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = +3
Query: 546 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 725
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 726 REQARDLE 749
Q R+LE
Sbjct: 173 GPQIRELE 180
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +2
Query: 308 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 475
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 84.6 bits (200), Expect = 8e-17
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 698
+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 562 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHV 621
Query: 699 TCVFGGAPKREQARDLE 749
VFGG K EQ++ L+
Sbjct: 622 VAVFGGGNKYEQSKALQ 638
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PFNKNFY+ HP + K+S E+++ R + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+ Y +PT IQ Q PIA+SG++++
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDII 558
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 686
+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 146 ETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL 205
Query: 687 YVRNTCVFGGAPK 725
+R V GGA +
Sbjct: 206 GIRTVSVIGGADR 218
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/60 (33%), Positives = 37/60 (61%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 61.7 bits (143), Expect = 6e-10
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
QPF K+FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
Y++PTPIQAQ P+ MSG++++A
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIA 147
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/72 (36%), Positives = 36/72 (50%)
Frame = +3
Query: 534 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 713
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 714 GAPKREQARDLE 749
G EQ +L+
Sbjct: 181 GTGISEQIAELK 192
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 461 PIQAQGWPIAMSGKNLL 511
PIQ Q P+ +SG++++
Sbjct: 221 PIQMQVLPVLLSGRDVM 237
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 653
+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 117 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 445
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 446 YKEPTPIQAQGWPIAMSGKNLL 511
++ PTPIQ Q MSG++++
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDII 113
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/77 (41%), Positives = 42/77 (54%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 698
QTGSGKT AY+LP + + Q P+AL +APTRELA+QI A F + ++
Sbjct: 524 QTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKV 583
Query: 699 TCVFGGAPKREQARDLE 749
+GG QA LE
Sbjct: 584 CVCYGGVSVPYQASQLE 600
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 356 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
VSG I F E F + + + GY+ PTP+Q PI M+G++L+A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 686
QTGSGKT A++LP + + N P A+ +APTRELA QI A F H +
Sbjct: 756 QTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGT 815
Query: 687 YVRNTCVFGGAPKREQARDLE 749
+R +GG Q R L+
Sbjct: 816 MLRPVVCYGGVSVSHQLRQLQ 836
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 753
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +3
Query: 513 RTQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSY 689
+ Q+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +
Sbjct: 128 QAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMH 187
Query: 690 VRNTCVFGGAPKREQARDLE 749
V+ GG RE LE
Sbjct: 188 VKCHACIGGTNVREDRMKLE 207
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 498 ERIYWRTQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADF 674
E + + +TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+ +
Sbjct: 111 EDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL 170
Query: 675 GHTSYVRNTCVFGGAPKREQ 734
S + C++GG P Q
Sbjct: 171 --KSNLEVYCIYGGMPYEPQ 188
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 50.4 bits (115), Expect = 2e-06
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHT 683
QTGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHH 481
Query: 684 SYVRNTCVFGGAPKREQARDLE 749
+ R+ + GG ++ DLE
Sbjct: 482 ARFRSVGLIGGRKQKWMRDDLE 503
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +2
Query: 320 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 487
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 488 AMSG 499
G
Sbjct: 197 MAHG 200
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 546 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 653
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 48.0 bits (109), Expect = 8e-06
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 698
+TGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G+ +
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSA 153
Query: 699 TCVFGGAP-KREQAR 740
+ GG K EQ R
Sbjct: 154 GLIIGGKDLKNEQKR 168
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ F + G+ G+ PT IQ QG P+A+SG+++L
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVL 91
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +3
Query: 513 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 692
+ Q+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G V
Sbjct: 40 QAQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSV 94
Query: 693 RNTCVFGGAPKREQARDLE 749
+ GG E R L+
Sbjct: 95 QCHACIGGTNIGEDIRKLD 113
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/77 (31%), Positives = 43/77 (55%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 698
+TGSGKTLA+++P +V + + + +G ++++PTREL+ Q VA D
Sbjct: 617 KTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTY 675
Query: 699 TCVFGGAPKREQARDLE 749
+ GG ++ +A L+
Sbjct: 676 GIIMGGVNRKAEAERLQ 692
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 176
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 698
+TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G + +++
Sbjct: 326 RTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLKS 382
Query: 699 TCVFGG 716
+ + GG
Sbjct: 383 SVILGG 388
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/76 (36%), Positives = 38/76 (50%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 698
+TGSGKT A+ LP + + + P G A+VL PTRELA QI G ++
Sbjct: 52 KTGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKE 106
Query: 699 TCVFGGAPKREQARDL 746
+ GG +QA L
Sbjct: 107 AVIVGGLDMMKQALSL 122
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 698
+TGSGKT A+ LP + + + P AL+L PTRELA QI + G V+
Sbjct: 9 ETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKC 63
Query: 699 TCVFGGAPKREQA 737
+ GG QA
Sbjct: 64 AVIVGGIDMMSQA 76
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 41.1 bits (92), Expect = 0.001
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 16/88 (18%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 656
+TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q++
Sbjct: 176 ETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
Query: 657 QVAADFGHTSYVRNTCVFGG--APKREQ 734
+ V+ + GG APK+++
Sbjct: 236 DHLVKAAKYTSVKVAAIVGGMAAPKQQR 263
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +3
Query: 606 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 749
P ALVL+PTRELA QIQ+V G V+ GG E R L+
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLD 51
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 513 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
R + G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
FE+ + G+ G+ +P+PIQ + P+A++G+++LA
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 513 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
R + G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
FE+ + G+ G+ +P+PIQ + P+A++G+++LA
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +3
Query: 513 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 689
++Q+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H +
Sbjct: 148 QSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPH 202
Query: 690 VR-NTCVFGGA-PKREQARD 743
++ N V G P+ ++ D
Sbjct: 203 IKINYAVRGNQFPRGQKCTD 222
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +2
Query: 344 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--NL 508
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N+
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNM 145
Query: 509 LAYS 520
+A S
Sbjct: 146 IAQS 149
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3
Query: 513 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSY 689
+++TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+ G S
Sbjct: 203 KSETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSI 254
Query: 690 V 692
V
Sbjct: 255 V 255
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
I FE+ + + + V GYK+PTP+Q PI ++L+A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 519 QTGSGKTLAYILPAIVHINNQPP 587
QTGSGKT A+++P + I + P
Sbjct: 920 QTGSGKTAAFLIPILSRIYMEGP 942
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 525 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 692
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 693 RNTCVFGGAPKREQ 734
R +FGG + ++
Sbjct: 294 RVQMIFGGGAEEDR 307
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 522 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 650
TG+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCA 52
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 368 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 481
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 278 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 418
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 513 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 689
+ ++G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G H
Sbjct: 56 QAKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIGCHYDG 110
Query: 690 VRNTCVFGGAPKREQARDLE 749
+ GG E + L+
Sbjct: 111 LACKVFIGGISLEEDKKALK 130
>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
Length = 1199
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 222 QNMRRPDWDSVHSNLSTKTFMIHILQFSKD 311
+N RR WDS HSN+S + H+ F D
Sbjct: 768 RNKRR--WDSFHSNVSADSGSAHMFDFDTD 795
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 228 CSDLQRILFSHQILQILQIYCHRC-QIETN 142
CS +L +IL+ +YC +C Q ETN
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETN 43
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 159 CQIETNYRRICCLLQIWN-HRFHGYYSS 79
C + +YRR CC L +W H + Y+SS
Sbjct: 218 CCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
>SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)
Length = 1552
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 420 CNKV*RQWVTKNRRLFKLKAGR*LCLERIYWRTQTGSGK 536
CN+ R V K+RRL AGR L I T +GS K
Sbjct: 59 CNESGRMSVDKDRRLISTSAGRVTKLPPIGAPTSSGSNK 97
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +3
Query: 516 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 695
TQT +L +P +HIN+ P R PI + + PT+ + I ++ D ++ +
Sbjct: 430 TQTTKPASLRVNVPLSLHINDSSPTRL-SFPITMDVHPTKTTSVTI-PISEDMQTSTIAK 487
Query: 696 NTCVFGGAPKREQAR 740
T F + +E ++
Sbjct: 488 QTSSFPRSNDKEASK 502
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,498,017
Number of Sequences: 59808
Number of extensions: 475530
Number of successful extensions: 1243
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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