Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021679
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 96 5e-21
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 44 3e-05
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 42 8e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 42 1e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 40 3e-04
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 37 0.003
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 36 0.004
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 33 0.028
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 33 0.028
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 32 0.086
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.11
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 31 0.11
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 30 0.35
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 0.81
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 1.1
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 27 2.5
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 3.3
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 3.3
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 26 4.3
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 4.3
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 5.7
SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protei... 25 9.9
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.9
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 95.9 bits (228), Expect = 5e-21
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +2
Query: 254 ACGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 433
ACG TH+A+ PLDL+KCR QV+ Y + GFK + +EG+RGL G PT IGYS+QG
Sbjct: 33 ACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQG 92
Query: 434 LCKFGFYEVFKVAYAGMLDDETAY 505
K+GFYE+FK Y+ ++ + A+
Sbjct: 93 CGKYGFYELFKHKYSTLVGAQKAH 116
Score = 75.8 bits (178), Expect = 5e-15
Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Frame = +1
Query: 514 TFVYLAASASAEFIADIALSPMEAAKVRIQTM-PGFASTLREAWPKMVKNEGYG 672
T +YLAASASAE +ADI L PMEA KVR+QT P FA+T REAW K+V NEG+G
Sbjct: 120 TSIYLAASASAELLADIMLCPMEAIKVRVQTSNPRFANTTREAWSKIVTNEGFG 173
Score = 26.6 bits (56), Expect = 3.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 183 AVPTESCEFGSPKYFALCGVGGVL 254
A P ++ + +P+Y+ LC +GG+L
Sbjct: 9 APPKKTLQLYTPQYYGLCTLGGLL 32
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 43.6 bits (98), Expect = 3e-05
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Frame = +2
Query: 251 SACGLTHTAVVPLDLVKCRLQV-------DAEK--YKNVVNGFKVSVREEGVRGLAKGWA 403
+ACG T P +++K R Q+ D K YK+V F + R EG+RGL +G
Sbjct: 33 AACGAV-TLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLG 91
Query: 404 PTFIGYSMQGLCKFGFYE-VFKVAYAGMLDD 493
++ C+ GFYE + + LDD
Sbjct: 92 TAYVYQICLNGCRLGFYEPIRRTLNTWFLDD 122
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKG 397
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 41.9 bits (94), Expect = 8e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 463
P+ +VK R+ Y N GF ++ EG+RG G+AP+ +G S QG +F YE
Sbjct: 118 PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVS-QGALQFMAYEKL 176
Query: 464 KV 469
K+
Sbjct: 177 KL 178
Score = 31.5 bits (68), Expect = 0.11
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 457
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F YE
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYE 263
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 41.5 bits (93), Expect = 1e-04
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Frame = +2
Query: 263 LTHTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 427
+T A P+ LVK RLQ+D A +Y++ ++ ++R EG RGL KG + + +G
Sbjct: 175 ITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVG- 233
Query: 428 QGLCKFGFYEVFKVAYA 478
+ ++ YE FK A A
Sbjct: 234 ESTLQWVLYEKFKHAVA 250
Score = 26.2 bits (55), Expect = 4.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 326 KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 460
KY ++ FK+ E+G+ GL G + FG YEV
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEV 355
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 39.9 bits (89), Expect = 3e-04
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 260 GLTHTAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 436
G T TA+ P D++K R+Q++ YKN ++ K+ EG RG G+ + S+
Sbjct: 221 GATATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSISST 280
Query: 437 CKFGFYE 457
+ YE
Sbjct: 281 ITWSVYE 287
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 36.7 bits (81), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Frame = +2
Query: 278 VVPLDLVKCRLQVDAE--------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 433
V LD + RL DA+ ++ +V+ ++ + R +G+RGL +G+ P+ +G +
Sbjct: 150 VYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYR 209
Query: 434 LCKFGFYEVFK-VAYAGMLD 490
FG Y+ K V G L+
Sbjct: 210 GLYFGMYDTLKPVVLVGPLE 229
Score = 29.9 bits (64), Expect = 0.35
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Frame = +2
Query: 254 ACGLTHTAVVPLDLVKCRLQVDAE---------KYKNVVNGFKVSVREEGVRGLAKGWAP 406
+ ++ TA P++ VK +Q E +YK + FK + EEGV L +G
Sbjct: 37 SAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTA 96
Query: 407 TFIGYSMQGLCKFGFYEVFK 466
+ Y F F + FK
Sbjct: 97 NVLRYFPTQALNFAFKDKFK 116
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 36.3 bits (80), Expect = 0.004
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Frame = +2
Query: 254 ACGLTHTAVV-PLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKG 397
A GL + VV PLD+VK R Q Y KN V+ G S+R EG+ GL +G
Sbjct: 14 AAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRG 73
Query: 398 WAPTFIGYSMQGLCKFGFYEVFKVAY 475
P +GY F YE KV +
Sbjct: 74 VGPMMLGYLPSWSIYFVVYEKCKVLF 99
Score = 29.9 bits (64), Expect = 0.35
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 329 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYT 508
Y N + F+ + EG+ +G P+ G G+ +F YE FK ++ +
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGI-QFPLYEYFKSFLDDFFGKKSNFH 288
Query: 509 TVPSCTWRRLRRRNSSPTLPCRPWR-RLRSVSKP 607
V + T ++ S+ T P R RL+S+ P
Sbjct: 289 IVLAATLSKIAA--STVTYPHEVLRTRLQSLDAP 320
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.5 bits (73), Expect = 0.028
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 463
PLD +K R Q + + + F+ +V+ EG++GL +G I ++ F Y+
Sbjct: 37 PLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSL 94
Query: 464 KVAYA 478
K+ +A
Sbjct: 95 KLTFA 99
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 33.5 bits (73), Expect = 0.028
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 227 RSLRSWWCSACGLT--HTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 400
R L S AC +T + P D++K R+Q+ + KYK+ ++ R EG+ +
Sbjct: 112 RPLASALAGACAITISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISY 171
Query: 401 APTFIGYSM 427
PT I S+
Sbjct: 172 -PTCIAMSI 179
Score = 31.1 bits (67), Expect = 0.15
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Frame = +2
Query: 263 LTHTAVVPLDLVKCRLQ----VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 430
L H+ + P+D +K R+Q V N+VN EGV L +G + +G
Sbjct: 32 LEHSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPS 91
Query: 431 GLCKFGFYEVFKVAYAGMLDDETAYTTVPSC 523
F E FK D A +C
Sbjct: 92 HAIYFSVLEFFKSKINASPDRPLASALAGAC 122
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 31.9 bits (69), Expect = 0.086
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +2
Query: 251 SACGLTHTAV-----VPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 400
S CG+T V PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 87 SICGMTAEVVSSFVWTPLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
Score = 28.7 bits (61), Expect = 0.81
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Frame = +2
Query: 248 CSACG--LTHTAVVPLDLVKCRLQV-------------DAEKYKNVVNGFKVSVREEGVR 382
CSA G + T PLD+VK R QV AEK ++ K+ + GV+
Sbjct: 179 CSALGTVVATTISTPLDIVKTRYQVATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGVK 238
Query: 383 GLAKGWAPTFIGYSMQGLCKFGFYEVFK 466
G +G G+ +E FK
Sbjct: 239 GFTRGLFTRMCYIMPSGMISMSVFESFK 266
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.5 bits (68), Expect = 0.11
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 275 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 442
A P D+VK ++Q D YKN K + G+RG +G+ P + +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 443 FGFYE 457
F YE
Sbjct: 289 FYVYE 293
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 31.5 bits (68), Expect = 0.11
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +2
Query: 263 LTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 442
+T + PLD++K ++ + E Y+ VV +E G+ G KG S+
Sbjct: 180 ITAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFGFEKGLGLRVFASSLGLSIY 236
Query: 443 FGFYEVFK 466
G YE K
Sbjct: 237 LGTYEHVK 244
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.9 bits (64), Expect = 0.35
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 457
PLD+VK R+Q+ K Y + K V+ EG L +G P + + + KF +
Sbjct: 28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASND 87
Query: 458 VF 463
+
Sbjct: 88 TY 89
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = +2
Query: 284 PLDLVKCRLQV------DAEKYKNVVNGFKVSVREEGVRGLAKGWAP 406
P D++K R+Q KY REEG L KG+ P
Sbjct: 219 PFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVP 265
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.81
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 281 VPLDLVKCRLQVDAEKYK 334
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 435 RPCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 337
RP E P+ G HPL RP PSS + P++T
Sbjct: 154 RPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 2.5
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 248 CSACGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFIGYS 424
C +T V PLD+VK RLQ ++ ++ + + + L KG AP +G
Sbjct: 32 CVGSVITTLTVTPLDVVKTRLQSES------ISQYSSTQPISSAKILGKGRPAPKPLGGP 85
Query: 425 MQGLCKFGFYEVFKVAYAGMLDDET 499
+ GL + +E + + G++ T
Sbjct: 86 VSGLYQIARHEGVRSLWRGLVPSLT 110
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 365 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 457
+ EG+ GL +G+ P S Q F FYE
Sbjct: 293 KSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 344 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 451
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 517 FVYLAASASAEFIADIALSPMEAAKVRIQTMPGF 618
F L A A D++L P++ K R+Q GF
Sbjct: 83 FEALGAGICAGLAVDLSLFPIDTLKTRLQAKGGF 116
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 284 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKG 397
P+D V LQ YK+ + F R G++GL +G
Sbjct: 212 PVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRG 249
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 272 TAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 415
T P D+++ R QV+ YKN+ + + EG+ G +G++ +
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNML 294
>SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protein
Sec23a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = +3
Query: 129 STVAPVAIEQTGGLAASAA-----VPTESCEF 209
S V+PVA++Q SAA +P + CEF
Sbjct: 203 SNVSPVALQQARSFQGSAAPSRFLLPIQQCEF 234
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 441 LQRPCIEYPMKVGAHPLARPRTPSSRTDTL 352
+ RP PM+ H L P+ PS++ L
Sbjct: 1024 IPRPLPNLPMEYNDHTLPSPKEPSNQASNL 1053
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,678,876
Number of Sequences: 5004
Number of extensions: 52604
Number of successful extensions: 185
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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