Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021678
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   7.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -1

Query: 228  PNEVPHTQTSPHT*IDQGKGDCPLSIVC*AQDGHQI 121
            PNEV   +   H      K DC +  +C  +  H +
Sbjct: 910  PNEVTCDEEEGHISYHPDKADCRMYYMCEGERKHHM 945


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 119 YYKNVLIQILKCIGY 75
           YYK+V ++ LK +GY
Sbjct: 223 YYKDVDLKALKKLGY 237


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 303 KLLPKYPS*KNPIYMYYNKNTTALFPNEVPHTQTSP 196
           ++LP++PS     ++ Y     A   N  P T +SP
Sbjct: 272 QVLPQWPSPIGASHLPYFAAAVAAASNLSPKTNSSP 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,927
Number of Sequences: 336
Number of extensions: 3763
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)