Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021678
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   7.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   7.4  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    23   9.8  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    23   9.8  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    23   9.8  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    23   9.8  

>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = -2

Query: 407 IPTMLLHGI*KNPSLNQCVVC*IRNNHAPRFTYD*SYYRSTPVKKIQYICIITKIRLLSF 228
           IP  L  G+     ++QCVV  I   H+   +    ++    +  I Y  I  K+R  + 
Sbjct: 179 IPQALQFGVTNQGGIDQCVVKRIIIQHSFELSTFLFFFAPMTMITILYALIGLKLRTSTL 238

Query: 227 LMKFRTLK 204
           + +  TL+
Sbjct: 239 MQRDGTLQ 246


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
 Frame = -2

Query: 668 LQNSSHPESLLNSLGTXXXXXXXXXXXFTHIPLKHYRLG*LNSALS---VAISKTKVTIV 498
           LQ S        S+ T             ++   HYRLG L+ A+S    AI + K+   
Sbjct: 426 LQGSLQAYGTATSILTEKVNADIPPEILNNVAALHYRLGNLDEAMSKLEQAIERAKIEAQ 485

Query: 497 HN 492
           H+
Sbjct: 486 HD 487


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 682 LTTICFRTLHIRNP 641
           L  ICFRTL + NP
Sbjct: 103 LYDICFRTLKVPNP 116


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 682 LTTICFRTLHIRNP 641
           L  ICFRTL + NP
Sbjct: 103 LYDICFRTLKVPNP 116


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 682 LTTICFRTLHIRNP 641
           L  ICFRTL + NP
Sbjct: 103 LYDICFRTLKVPNP 116


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 682 LTTICFRTLHIRNP 641
           L  ICFRTL + NP
Sbjct: 103 LYDICFRTLKVPNP 116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,581
Number of Sequences: 2352
Number of extensions: 14566
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)