Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021677
(676 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 113 5e-24
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 109 8e-23
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 108 1e-22
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 103 5e-21
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 103 5e-21
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 98 2e-19
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 95 1e-18
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 94 3e-18
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 94 3e-18
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 91 2e-17
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 90 5e-17
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 89 7e-17
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 89 1e-16
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 85 1e-15
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 85 1e-15
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 77 4e-13
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 69 8e-11
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 68 2e-10
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 65 2e-09
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 58 2e-07
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 50 7e-05
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 46 8e-04
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 43 0.006
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.018
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 42 0.018
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 40 0.042
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 38 0.29
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 36 0.68
UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2; ... 36 0.90
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.90
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 36 1.2
UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;... 36 1.2
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.2
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 35 1.6
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.1
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 35 2.1
UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole ge... 34 2.7
UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_Q1DCK1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;... 33 4.8
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 33 4.8
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 6.3
UniRef50_UPI0000DB70F4 Cluster: PREDICTED: similar to scribbler ... 33 6.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 33 6.3
UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep... 33 8.4
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sa... 33 8.4
UniRef50_O46169 Cluster: Orthodenticle-1 protein; n=1; Tribolium... 33 8.4
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 33 8.4
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 113 bits (271), Expect = 5e-24
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 8e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/56 (64%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQ-RRRIQRK 674
LPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGK + RRRIQR+
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 109 bits (261), Expect = 8e-23
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 67 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 83.8 bits (198), Expect = 3e-15
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +3
Query: 57 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 236
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 237 AGHQTS 254
AGHQTS
Sbjct: 61 AGHQTS 66
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/58 (67%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +3
Query: 504 SRLPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK-VNAQRRRIQRK 674
S PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+ RRRI R+
Sbjct: 151 SEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARR 208
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +1
Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516
L ++AA+GVPALVQ++GH+I+ + FP
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 108 bits (260), Expect = 1e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 181 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +3
Query: 90 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTS
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTS 180
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 103 bits (246), Expect = 5e-21
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 40 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 103 bits (246), Expect = 5e-21
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 63 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = +3
Query: 72 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 251
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 252 S 254
S
Sbjct: 62 S 62
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = +2
Query: 233 GGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
G +ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 243 HQTS 254
++TS
Sbjct: 60 YETS 63
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRA--GKVNAQRRRI 665
+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GK+ ++ +I
Sbjct: 150 VPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKI 203
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 95.5 bits (227), Expect = 1e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ + SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 HSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +3
Query: 72 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRR 662
+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+ + RR
Sbjct: 149 VPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRR 199
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 93.9 bits (223), Expect = 3e-18
Identities = 45/58 (77%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +3
Query: 504 SRLPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQ-RRRIQRK 674
S +PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGK + RRR+ RK
Sbjct: 13 SEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRK 70
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/64 (65%), Positives = 46/64 (71%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
+A + Q G + +ESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGMQ-HSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 389 RRWH 400
RRWH
Sbjct: 110 RRWH 113
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +3
Query: 507 RLPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRRIQR 671
++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG ++ QR + R
Sbjct: 150 QIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAG-ISKQRGKKYR 203
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 91.5 bits (217), Expect = 2e-17
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
+A + + G+ + + SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGYQTS-ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 389 RRWH 400
RRWH
Sbjct: 108 RRWH 111
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = +3
Query: 75 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK-SQRLRAGK 641
+P+VV D +++INKTK AV L + +++ ++ K + R R G+
Sbjct: 149 VPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGR 193
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 89.8 bits (213), Expect = 5e-17
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ +ESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 63 HSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 243 HQTS 254
HQ S
Sbjct: 61 HQHS 64
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 433 LGGSVAATGVPALVQARGHIIEKIPGFP 516
+ ++AATG P+LV ARGH I +P P
Sbjct: 125 VAAAIAATGCPSLVMARGHRINNVPELP 152
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKVNAQRRR 662
LPLV+++++Q INKT AV F + K + +K + S +R GK + RR
Sbjct: 151 LPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRR 203
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 89.4 bits (212), Expect = 7e-17
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
+A + G+ + + SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGYQTS-ARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 389 RRWH 400
R WH
Sbjct: 108 RHWH 111
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +3
Query: 69 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 249 TS 254
TS
Sbjct: 61 TS 62
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 88.6 bits (210), Expect = 1e-16
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 61 SWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 85.4 bits (202), Expect = 1e-15
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
+ +ESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 59 HSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRR-IQRK 674
LP++V+D + + KTK AV LR L ++ +V KS+ +R GK + RR QRK
Sbjct: 147 LPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRK 202
Score = 41.1 bits (92), Expect = 0.024
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = +3
Query: 84 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q S
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHS 60
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 85.0 bits (201), Expect = 1e-15
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ +ESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 62 HSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 49.6 bits (113), Expect = 7e-05
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRRIQRK 674
LPLVV+D V++I KTK+AV L LKA D+ +S+R+R G A+ RR ++
Sbjct: 150 LPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQR 204
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +3
Query: 81 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ S
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHS 63
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 77.0 bits (181), Expect = 4e-13
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 66 SWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +3
Query: 72 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 251
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 252 S 254
S
Sbjct: 63 S 63
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +3
Query: 507 RLPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRRIQRK 674
++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+ + R+I+ +
Sbjct: 149 QIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKER 205
Score = 33.9 bits (74), Expect = 3.6
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 445 VAATGVPALVQARGHIIEKIPGFPWL*PTKS 537
+AA+ VPALV ARGH I +P P + +KS
Sbjct: 128 IAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 69.3 bits (162), Expect = 8e-11
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
++SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 65 AKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 63 SWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 41.9 bits (94), Expect = 0.014
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +3
Query: 69 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 249 TS 254
S
Sbjct: 59 VS 60
Score = 37.5 bits (83), Expect = 0.29
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRRIQRK 674
+P+VV D VQEI +T+ AV L+++ + D+ +V R+ K +R + K
Sbjct: 147 VPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTK 201
Score = 32.7 bits (71), Expect = 8.4
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 400 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPGFP 516
PSRQ A + ++AAT V LVQARGH++ ++ P
Sbjct: 113 PSRQRKFA---IASAIAATAVVPLVQARGHVLGEVKEVP 148
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK 641
LPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGK
Sbjct: 13 LPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGK 56
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/49 (57%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +3
Query: 531 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRR-IQRK 674
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGK + RR IQR+
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRR 146
Score = 40.3 bits (90), Expect = 0.042
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 168 DLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
D+VN VH ++ KN QPY VS+ AG+QTS
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTS 53
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 185 SRFYVQELEAALLREQGGWSPNQSESWGTGRAVARIPRVRGGG 313
S + + + + E G+ + +ESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAGYQTS-AESWGTGRARGPMPRVRGGG 73
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 49.6 bits (113), Expect = 7e-05
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 397
+ SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 60 AHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +3
Query: 78 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQ 57
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 46.0 bits (104), Expect = 8e-04
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +3
Query: 483 RTHY*KDS-RLPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRR 659
R H K+ +LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+ + R
Sbjct: 131 RGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGR 190
Query: 660 RIQR 671
R ++
Sbjct: 191 RYKQ 194
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/51 (33%), Positives = 33/51 (64%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRR 662
LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGK + RR
Sbjct: 144 LPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRR 194
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 78 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TS
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTS 57
Score = 36.3 bits (80), Expect = 0.68
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 397
+ESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 58 AESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.018
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 310 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 414
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 41.5 bits (93), Expect = 0.018
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 483 RTHY*KDS-RLPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRR 659
R H KDS R P+VV D + + T + FL+++ + D+ +V + R+RAGK + R
Sbjct: 136 RGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGR 195
Query: 660 R 662
+
Sbjct: 196 K 196
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 40.3 bits (90), Expect = 0.042
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +3
Query: 522 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAG--KVNAQRRRIQR 671
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K ++ R+++
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRK 52
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRR 662
LP+VV ++IN+ K+A L W D+ + + ++RAGK + RR
Sbjct: 167 LPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRR 217
Score = 37.1 bits (82), Expect = 0.39
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 230 QGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+G + ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
Score = 33.1 bits (72), Expect = 6.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPGFP 516
++AAT + V ARGH++EK+P P
Sbjct: 144 AIAATAYRSWVAARGHVVEKVPSLP 168
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 36.3 bits (80), Expect = 0.68
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +3
Query: 501 DSRLPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRRIQRK 674
+ LP VV+++++ + +TK R + ++D+ + + +R RAG+ + RR +K
Sbjct: 134 EGELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKK 191
>UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 449
Score = 35.9 bits (79), Expect = 0.90
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 400 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIP-GFP 516
P+ P + +GG A GVPAL+ G +I +P GFP
Sbjct: 114 PAMSAPDVGTAIGGLAALPGVPALISGLGSLIPSVPAGFP 153
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 35.9 bits (79), Expect = 0.90
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 120 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 206
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 391
R QGG P ++ + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 539
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 367 VRPHEALAALAPSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPG 510
+RP + ALAP+ +PP S G A G P L+ A G +++ +PG
Sbjct: 151 LRPSSRIRALAPAPRPPLLPSAQG---APHGQPTLICAPGSLLQPLPG 195
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 284 ARIPRVRGGGTHRSGQGAFGNMCRGG 361
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 382
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 356 HDTCYRRHPDRTYEYHHHGHAEFGRQH 276
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 269 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 382
TG ARI R++GGG R G+ RGGR P K
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_126, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 2025
Score = 34.3 bits (75), Expect = 2.7
Identities = 29/88 (32%), Positives = 41/88 (46%)
Frame = +2
Query: 71 SPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPN 250
S VGV ++ G+ A P V+ A P G + + A+LR+ G SP+
Sbjct: 1937 STVVDVGVSKQ---GSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAGVLSPS 1993
Query: 251 QSESWGTGRAVARIPRVRGGGTHRSGQG 334
G GRA+ R VR GG R+G+G
Sbjct: 1994 VGR--GRGRAITRGRGVR-GGRGRAGRG 2018
>UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1491
Score = 34.3 bits (75), Expect = 2.7
Identities = 29/88 (32%), Positives = 41/88 (46%)
Frame = +2
Query: 71 SPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPN 250
S VGV ++ G+ A P V+ A P G + + A+LR+ G SP+
Sbjct: 1403 STVVDVGVSKQ---GSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAGVLSPS 1459
Query: 251 QSESWGTGRAVARIPRVRGGGTHRSGQG 334
G GRA+ R VR GG R+G+G
Sbjct: 1460 VGR--GRGRAITRGRGVR-GGRGRAGRG 1484
>UniRef50_Q1DCK1 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 1494
Score = 33.9 bits (74), Expect = 3.6
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 137 PVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPNQSESWGTGRAVARIPRVRG 307
PV V+ +GP SR+ V+ E ++ GGWSP Q + G A P V G
Sbjct: 946 PVLVEAGTAAGP---VSRYNVETQERWMVALSGGWSPGQEKGRGIYMVDAWSPEVNG 999
>UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 468
Score = 33.5 bits (73), Expect = 4.8
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = -3
Query: 458 PVAATLPPRPLSXXXXXXXXXXXXXASWGRTYVHHDTCYRRHPDRTYEYHHHG-HAEFGR 282
P+A +PP PL + R HH + HP + HHH ++ GR
Sbjct: 356 PIAFAVPPPPLHTSTTTKHNSWHSGVATSR---HHQ---QYHPPHHQQQHHHNKNSSQGR 409
Query: 281 QHVQYPM-IQTGLVTSLLAHAVGLPRVLGHRN 189
H P G TS + G PR + H N
Sbjct: 410 HHNNIPFRSHQGRNTSYNSSNYGKPRFIPHMN 441
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 33.5 bits (73), Expect = 4.8
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +1
Query: 271 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 435
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 436 GGSVAATGVPA 468
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.1 bits (72), Expect = 6.3
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 341 RRHPDRTYEYHHHGHAEFGRQHVQ-YP 264
R PD + +HHHGH G HV+ YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_UPI0000DB70F4 Cluster: PREDICTED: similar to scribbler
CG5580-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to scribbler CG5580-PA, isoform A -
Apis mellifera
Length = 1927
Score = 33.1 bits (72), Expect = 6.3
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 359 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQTGLVTSLLAHAVGLPRVLG 198
HH + HP + +HHH H +Q +Q GL +S L P G
Sbjct: 178 HHPHHHHPHPHHHHHHHHHHHHHHHQQQLQNSSTTNGLNSSNLIAVTTSPNGCG 231
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.1 bits (72), Expect = 6.3
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 364
RE GG + +SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGGA----QSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep:
AsmA precursor - Delftia acidovorans SPH-1
Length = 791
Score = 32.7 bits (71), Expect = 8.4
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +1
Query: 271 WTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSVA 450
WT RP S P W + + V W VR A L QPP+ + G V
Sbjct: 275 WTFKRPESTGPRWRFQVAQLSLRGGLVGWSDGVRQMAVRARLDSLVQPPSPDFPYGMRVG 334
Query: 451 ATG--VPALVQARGHI 492
TG A V+A+G I
Sbjct: 335 LTGRIAKATVEAQGLI 350
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 8.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 371 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 279
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0004B13.22
protein - Oryza sativa subsp. japonica (Rice)
Length = 248
Score = 32.7 bits (71), Expect = 8.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 393 VGTVASTSDSGERPWRQRCCYRRPSARS 476
+GT AS G+RPW R C+ R RS
Sbjct: 106 IGTAASIFSGGQRPWACRSCHLRGGCRS 133
>UniRef50_O46169 Cluster: Orthodenticle-1 protein; n=1; Tribolium
castaneum|Rep: Orthodenticle-1 protein - Tribolium
castaneum (Red flour beetle)
Length = 371
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 400 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPGFP 516
P P+ SGLGG ++ +PAL GH +E +P FP
Sbjct: 76 PYAPHPSLSSGLGGGLSGMPMPALGFGLGHPLESVP-FP 113
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 32.7 bits (71), Expect = 8.4
Identities = 12/52 (23%), Positives = 30/52 (57%)
Frame = +3
Query: 507 RLPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKVNAQRRR 662
++P V+ D+++ + TK+ + L DI++ K +++++GK + R+
Sbjct: 139 QIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRK 190
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,154,074
Number of Sequences: 1657284
Number of extensions: 14103017
Number of successful extensions: 49234
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 45346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48804
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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