Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021676X
         (418 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X66982-1|CAA47391.1|  577|Drosophila melanogaster factor 5 protein.    35   0.050
AY051733-1|AAK93157.1|  577|Drosophila melanogaster LD26157p pro...    35   0.050
AE014297-456|AAF54125.1|  577|Drosophila melanogaster CG10281-PA...    35   0.050

>X66982-1|CAA47391.1|  577|Drosophila melanogaster factor 5 protein.
          Length = 577

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 360 GVTEEXVRRYLARKPMTTT 416
           G+TEE VRRYL RKP+T T
Sbjct: 514 GITEEAVRRYLKRKPLTAT 532


>AY051733-1|AAK93157.1|  577|Drosophila melanogaster LD26157p
           protein.
          Length = 577

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 360 GVTEEXVRRYLARKPMTTT 416
           G+TEE VRRYL RKP+T T
Sbjct: 514 GITEEAVRRYLKRKPLTAT 532


>AE014297-456|AAF54125.1|  577|Drosophila melanogaster CG10281-PA
           protein.
          Length = 577

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 360 GVTEEXVRRYLARKPMTTT 416
           G+TEE VRRYL RKP+T T
Sbjct: 514 GITEEAVRRYLKRKPLTAT 532


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,070,065
Number of Sequences: 53049
Number of extensions: 70791
Number of successful extensions: 240
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)