Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021675
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060367-1|AAL25406.1|  299|Drosophila melanogaster LD22381p pro...    48   2e-05
AF221109-1|AAF59840.1|  299|Drosophila melanogaster CHARYBDE pro...    48   2e-05
AE014296-1956|AAF50060.2|  299|Drosophila melanogaster CG7533-PC...    48   2e-05
AF221110-1|AAF59841.1|  280|Drosophila melanogaster SCYLLA protein.    42   6e-04
BT015975-1|AAV36860.1|  280|Drosophila melanogaster RE71335p pro...    39   0.006
AY075382-1|AAL68220.1|  241|Drosophila melanogaster LD22812p pro...    39   0.006
AE014296-1937|AAS65038.1|  241|Drosophila melanogaster CG7590-PB...    39   0.006
AE014296-1936|AAF50074.1|  280|Drosophila melanogaster CG7590-PA...    39   0.006
AE014297-3638|AAF56344.1|  841|Drosophila melanogaster CG10951-P...    31   2.0  

>AY060367-1|AAL25406.1|  299|Drosophila melanogaster LD22381p
           protein.
          Length = 299

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/48 (43%), Positives = 29/48 (60%)
 Frame = +3

Query: 561 RRLAAFKIDPNXXXXXXXXXXXXXDPTNWTSLLPQFLKNLTRGGTIII 704
           +R+A FK+DP+             D + W+SL+PQF+KNLTR  TI I
Sbjct: 237 KRIAYFKVDPDTVSIFELYLTLRQDKSGWSSLVPQFIKNLTRSNTINI 284


>AF221109-1|AAF59840.1|  299|Drosophila melanogaster CHARYBDE
           protein.
          Length = 299

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/48 (43%), Positives = 29/48 (60%)
 Frame = +3

Query: 561 RRLAAFKIDPNXXXXXXXXXXXXXDPTNWTSLLPQFLKNLTRGGTIII 704
           +R+A FK+DP+             D + W+SL+PQF+KNLTR  TI I
Sbjct: 237 KRIAYFKVDPDTVSIFELYLTLRQDKSGWSSLVPQFIKNLTRSNTINI 284


>AE014296-1956|AAF50060.2|  299|Drosophila melanogaster CG7533-PC
           protein.
          Length = 299

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/48 (43%), Positives = 29/48 (60%)
 Frame = +3

Query: 561 RRLAAFKIDPNXXXXXXXXXXXXXDPTNWTSLLPQFLKNLTRGGTIII 704
           +R+A FK+DP+             D + W+SL+PQF+KNLTR  TI I
Sbjct: 237 KRIAYFKVDPDTVSIFELYLTLRQDKSGWSSLVPQFIKNLTRSNTINI 284


>AF221110-1|AAF59841.1|  280|Drosophila melanogaster SCYLLA protein.
          Length = 280

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 20/46 (43%), Positives = 26/46 (56%)
 Frame = +3

Query: 561 RRLAAFKIDPNXXXXXXXXXXXXXDPTNWTSLLPQFLKNLTRGGTI 698
           RR+A+ K+DP+             D   WTSLLPQF+K+L R  TI
Sbjct: 194 RRIASIKVDPDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITI 239


>BT015975-1|AAV36860.1|  280|Drosophila melanogaster RE71335p
           protein.
          Length = 280

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +3

Query: 561 RRLAAFKIDPNXXXXXXXXXXXXXDPTNWTSLLPQFLKNLTRGGTI 698
           RR+A+ K+D +             D   WTSLLPQF+K+L R  TI
Sbjct: 194 RRIASIKVDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITI 239


>AY075382-1|AAL68220.1|  241|Drosophila melanogaster LD22812p
           protein.
          Length = 241

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +3

Query: 561 RRLAAFKIDPNXXXXXXXXXXXXXDPTNWTSLLPQFLKNLTRGGTI 698
           RR+A+ K+D +             D   WTSLLPQF+K+L R  TI
Sbjct: 155 RRIASIKVDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITI 200


>AE014296-1937|AAS65038.1|  241|Drosophila melanogaster CG7590-PB,
           isoform B protein.
          Length = 241

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +3

Query: 561 RRLAAFKIDPNXXXXXXXXXXXXXDPTNWTSLLPQFLKNLTRGGTI 698
           RR+A+ K+D +             D   WTSLLPQF+K+L R  TI
Sbjct: 155 RRIASIKVDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITI 200


>AE014296-1936|AAF50074.1|  280|Drosophila melanogaster CG7590-PA,
           isoform A protein.
          Length = 280

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +3

Query: 561 RRLAAFKIDPNXXXXXXXXXXXXXDPTNWTSLLPQFLKNLTRGGTI 698
           RR+A+ K+D +             D   WTSLLPQF+K+L R  TI
Sbjct: 194 RRIASIKVDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITI 239


>AE014297-3638|AAF56344.1|  841|Drosophila melanogaster CG10951-PA
           protein.
          Length = 841

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 307 NVGFNSEKAWSGPTWREAPAPVPTEAALAQRLERELRAAK-GASELATAEVLVPAELLAR 483
           N G++ E    GP   +  APVP  A     +E EL  A+    +L  A+   P E+L +
Sbjct: 368 NKGYSYEDDVGGPGSDQLTAPVPAAAYSNVSMELELPTAQTETKQLMIADTAAPHEILEK 427

Query: 484 AS 489
            S
Sbjct: 428 RS 429


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,785,249
Number of Sequences: 53049
Number of extensions: 502112
Number of successful extensions: 1642
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)