Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021674
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.60 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.60 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   0.60 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   2.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   2.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   3.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.2  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 646 TRPSGRWCELPSAGLC 693
           ++ S + CE+PSAGLC
Sbjct: 97  SKKSCQGCEMPSAGLC 112


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 646 TRPSGRWCELPSAGLC 693
           ++ S + CE+PSAGLC
Sbjct: 45  SKKSCQGCEMPSAGLC 60


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 646 TRPSGRWCELPSAGLC 693
           ++ S + CE+PSAGLC
Sbjct: 228 SKKSCQGCEMPSAGLC 243


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 283 FCSTRGFCPRELALGHLRYSLTDVP 209
           FCS +G    +  +GHLR+     P
Sbjct: 24  FCSFQGVPYAQPPIGHLRFKAPQAP 48


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 283 FCSTRGFCPRELALGHLRYSLTDVP 209
           FCS +G    +  +GHLR+     P
Sbjct: 26  FCSFQGVPYAQPPIGHLRFKAPQAP 50


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 283 FCSTRGFCPRELALGHLRYSLTDVP 209
           FCS +G    +  +GHLR+     P
Sbjct: 24  FCSFQGVPYAQPPIGHLRFKAPQAP 48


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 283 FCSTRGFCPRELALGHLRYSLTDVP 209
           FCS +G    +  +GHLR+     P
Sbjct: 26  FCSFQGVPYAQPPIGHLRFKAPQAP 50


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 7   SSLKNHYFHCFITYSVGRK 63
           SS    +FHC+     GRK
Sbjct: 416 SSFFQQFFHCYCPIKFGRK 434


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 82  YYRPRTASAQPSK 44
           YYRPRT+  +P +
Sbjct: 232 YYRPRTSRTEPPR 244


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 233 ALFFDRCTAPVKLPAWQC 180
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 233 ALFFDRCTAPVKLPAWQC 180
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,240
Number of Sequences: 336
Number of extensions: 3625
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)