Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021674
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    30   3.5  
BT011483-1|AAR99141.1|  913|Drosophila melanogaster RE03641p pro...    29   8.1  
AY268106-1|AAP03646.1|  913|Drosophila melanogaster painless pro...    29   8.1  
AE013599-3983|AAF47293.1|  913|Drosophila melanogaster CG15860-P...    29   8.1  

>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 658 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 566
           +  EC  Q+S  ++ LV+S+IT+AT +H  G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731


>BT011483-1|AAR99141.1|  913|Drosophila melanogaster RE03641p
           protein.
          Length = 913

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 GVLRPAHEDRNLAWSKRAKAGLIQMFSTHRDCESTAYRSFSIKSF*Q-EVPE-KLPQ 399
           G   P H     +  K  K  LIQ+F  H + +  +YR+  ++   Q + PE KLP+
Sbjct: 154 GEFTPLHHVLRKSKVKAGKKELIQLFLDHPELDIDSYRNGEVRRLLQAQFPELKLPE 210


>AY268106-1|AAP03646.1|  913|Drosophila melanogaster painless
           protein.
          Length = 913

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 GVLRPAHEDRNLAWSKRAKAGLIQMFSTHRDCESTAYRSFSIKSF*Q-EVPE-KLPQ 399
           G   P H     +  K  K  LIQ+F  H + +  +YR+  ++   Q + PE KLP+
Sbjct: 154 GEFTPLHHVLRKSKVKAGKKELIQLFLDHPELDIDSYRNGEVRRLLQAQFPELKLPE 210


>AE013599-3983|AAF47293.1|  913|Drosophila melanogaster CG15860-PA
           protein.
          Length = 913

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 GVLRPAHEDRNLAWSKRAKAGLIQMFSTHRDCESTAYRSFSIKSF*Q-EVPE-KLPQ 399
           G   P H     +  K  K  LIQ+F  H + +  +YR+  ++   Q + PE KLP+
Sbjct: 154 GEFTPLHHVLRKSKVKAGKKELIQLFLDHPELDIDSYRNGEVRRLLQAQFPELKLPE 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,404,886
Number of Sequences: 53049
Number of extensions: 736236
Number of successful extensions: 2150
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2150
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)