Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021673
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AL161954-1|CAB82305.1|  110|Homo sapiens hypothetical protein pr...    31   4.7  
AB033092-1|BAA86580.1|  601|Homo sapiens KIAA1266 protein protein.     31   4.7  
AF058073-1|AAC15442.1|  108|Homo sapiens immunoglobulin lambda l...    30   8.3  
AF058071-1|AAC15440.1|  108|Homo sapiens immunoglobulin lambda l...    30   8.3  

>AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43705 fis, clone TESOP2001818. ).
          Length = 321

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 312 PIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAER 419
           P+P  G+ T   ++PS+L+ ++  G P W ED+  R
Sbjct: 228 PLPPKGTETFFCVLPSALRAALSCG-PSWGEDSGPR 262


>AL161954-1|CAB82305.1|  110|Homo sapiens hypothetical protein
           protein.
          Length = 110

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 576 HLHVHPS--PEFSRSAESIRTPPQIGALRVPNHISL 475
           +L +HP+  P   RS  S++TP     L  PNH SL
Sbjct: 52  YLEIHPAKKPNVIRSTPSLQTPTTKRMLTTPNHTSL 87


>AB033092-1|BAA86580.1|  601|Homo sapiens KIAA1266 protein protein.
          Length = 601

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 576 HLHVHPS--PEFSRSAESIRTPPQIGALRVPNHISL 475
           +L +HP+  P   RS  S++TP     L  PNH SL
Sbjct: 543 YLEIHPAKKPNVIRSTPSLQTPTTKRMLTTPNHTSL 578


>AF058073-1|AAC15442.1|  108|Homo sapiens immunoglobulin lambda
           light chain VJ region protein.
          Length = 108

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +2

Query: 257 IIFKNNEK*RPLSERESGSYSGT 325
           +IFK++E+   + ER SGSYSGT
Sbjct: 46  VIFKDDERPSGIPERFSGSYSGT 68


>AF058071-1|AAC15440.1|  108|Homo sapiens immunoglobulin lambda
           light chain VJ region protein.
          Length = 108

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +2

Query: 257 IIFKNNEK*RPLSERESGSYSGT 325
           +IFK++E+   + ER SGSYSGT
Sbjct: 46  VIFKDDERPSGIPERFSGSYSGT 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,516,428
Number of Sequences: 237096
Number of extensions: 2398790
Number of successful extensions: 7739
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7730
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)