Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021391
         (464 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   4.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   4.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      20   9.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   9.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   9.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 305  FLHRCSCG*HPATEHL 258
            F +RC CG HP  + L
Sbjct: 2668 FKNRCGCGKHPLLKTL 2683


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 2   AAYLDLERVECVTQNQPPEELRRSLD 79
           A +    R   V Q + PEELRR +D
Sbjct: 77  AVFEGTNRKNRVLQWREPEELRRLMD 102


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
 Frame = +2

Query: 41  QNQPPEELRRSLDALSTKSSKQLNSVAKQ---FGSIGRSMSSKIKKNSGPWPN*LARAAA 211
           Q +PP++     DA    + K  +S  +Q   + S  +   SK   +   + + +A AAA
Sbjct: 59  QARPPQD--SPYDASVAAACKLYSSEGQQNSNYSSNSKPDCSKGNADQNGYASVVA-AAA 115

Query: 212 VKVILKRAWCGGSRLRGALLQGASRKSTC 298
           VK + + A  GG       L G  R + C
Sbjct: 116 VKDVWQSATSGGGANLTNSLTGPVRPAAC 144


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 146 TCRCCQTVWRQNLIVSSF*STVRP 75
           +C CCQ    +   VS F    +P
Sbjct: 86  SCMCCQESGEREASVSLFCPKAKP 109


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -1

Query: 365 CGSFPRCTPSCFVEIVFDHFFLHRCSCG*HPATEHLAV 252
           CG+    TP   +E +   F L +  C      EHL +
Sbjct: 538 CGTMWHETPEEMMEFLKSVFRLDQDQCSHRIVREHLGL 575


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -1

Query: 365 CGSFPRCTPSCFVEIVFDHFFLHRCSCG*HPATEHLAV 252
           CG+    TP   +E +   F L +  C      EHL +
Sbjct: 538 CGTMWHETPEEMMEFLKSVFRLDQDQCSHRIVREHLGL 575


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,765
Number of Sequences: 336
Number of extensions: 1818
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)