Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021391
         (464 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   1.7  
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    24   2.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   3.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   3.0  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    22   9.2  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 202 SCQSVWPWTRILLYLTAHRPA 140
           +C SV+P + +LL   AH PA
Sbjct: 227 ACSSVYPASSLLLPQDAHHPA 247


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 110 NSVAKQFGSIGRSMSSKIKKNSGP 181
           +++ KQF SI   + +K  K++GP
Sbjct: 92  HAIPKQFNSIALKVLAKCNKSTGP 115


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 199 KSSGSQSNPEESLVRRQSTAR 261
           K  G  + PEE  VRR+S  R
Sbjct: 272 KKEGDAAKPEEDTVRRRSRLR 292


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 199 KSSGSQSNPEESLVRRQSTAR 261
           K  G  + PEE  VRR+S  R
Sbjct: 273 KKEGDAAKPEEDTVRRRSRLR 293


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 51  PPKS*DDRWTHCR 89
           P +S DD WT C+
Sbjct: 285 PARSADDLWTRCK 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,407
Number of Sequences: 2352
Number of extensions: 8897
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)