Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021390
         (659 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    64   4e-09
UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella ve...    53   7e-06
UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa...    44   0.002
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0...    44   0.002
UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline recep...    40   0.070
UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;...    38   0.28 
UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDN...    37   0.37 
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo...    37   0.37 
UniRef50_Q8CM04 Cluster: Putative uncharacterized protein; n=8; ...    36   1.1  
UniRef50_Q3W219 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  
UniRef50_A7SWM8 Cluster: Predicted protein; n=1; Nematostella ve...    33   6.1  

>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome D of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 144

 Score = 63.7 bits (148), Expect = 4e-09
 Identities = 30/45 (66%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = -1

Query: 320 QTRHAPVXRANPYSEVTDPICRFPYS-LFYRLEALHLGDLLRIWV 189
           Q  H P+ RANPY EVTD  CR P S LFY+LEA+HLGDLLR+ V
Sbjct: 58  QGPHCPILRANPYPEVTDLFCRLPLSTLFYQLEAVHLGDLLRLSV 102


>UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 123

 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = -1

Query: 305 PVXRANPYSEVTDPICRFPY-SLFYRLEALHLGDLLRIWV 189
           P  RANP+ EVTD  CR P  +LFY+ EA HLGDLLR+ V
Sbjct: 63  PTLRANPFPEVTDLFCRLPLPTLFYQPEAAHLGDLLRLLV 102


>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
           Aa1-330 - Rattus norvegicus (Rat)
          Length = 151

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 20/39 (51%), Positives = 23/39 (58%)
 Frame = -2

Query: 226 RLFTLETCCGYGYEPXRHLXVHPSPEFSRSAESIRTPRK 110
           RLFTLETCCGYGY P R L  HP P   +    +   R+
Sbjct: 25  RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRR 61


>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
           LRRG00134 - Rattus norvegicus (Rat)
          Length = 221

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 20/39 (51%), Positives = 23/39 (58%)
 Frame = -2

Query: 226 RLFTLETCCGYGYEPXRHLXVHPSPEFSRSAESIRTPRK 110
           RLFTLETCCGYGY P R L  HP P   +    +   R+
Sbjct: 95  RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRR 131


>UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline
           receptor; n=1; Acheta domesticus|Rep: Alpha-L1 nicotinic
           acetyl choline receptor - Acheta domesticus (House
           cricket)
          Length = 39

 Score = 39.5 bits (88), Expect = 0.070
 Identities = 18/24 (75%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = -1

Query: 278 EVTDPICRFPYSLF-YRLEALHLG 210
           EVTDPICR P   F YRL+ALHLG
Sbjct: 16  EVTDPICRLPLPTFVYRLDALHLG 39


>UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;
           n=3; Eukaryota|Rep: Putative senescence-associated
           protein - Plasmodium yoelii yoelii
          Length = 205

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -1

Query: 659 LNTREGPSQCFVLIRQSDSXCPCQ 588
           +NT  G SQC+VLI+QSDS CP Q
Sbjct: 181 VNTISGFSQCYVLIKQSDSPCPFQ 204


>UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDNA,
           RIKEN full-length enriched library, clone:F730204M12
           product:hypothetical protein, full insert sequence; n=3;
           Amniota|Rep: B6-derived CD11 +ve dendritic cells cDNA,
           RIKEN full-length enriched library, clone:F730204M12
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 136

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +3

Query: 141 LENSGEGCTXRCRXGSYPYPQQVSKVKSL 227
           L+  G GC  + R G YPYPQQVSKV SL
Sbjct: 104 LKIRGRGC--KSRAGPYPYPQQVSKVNSL 130


>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
           Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
           tabacum (Common tobacco)
          Length = 530

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 21/39 (53%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 297 QSQSLFRSYGSNXXXXXXXXL-STRGSSPWRPAADMGTN 184
           QSQS  RSYGS         + STRG SPWRP A +G N
Sbjct: 225 QSQSFSRSYGSILPTSLAYIVPSTRGCSPWRPDAFVGGN 263


>UniRef50_Q8CM04 Cluster: Putative uncharacterized protein; n=8;
           Bacteria|Rep: Putative uncharacterized protein -
           Corynebacterium efficiens
          Length = 261

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 307 PRSSEPILIPKLRIQFADSLTHYSID-*RLFTLETCCGYGYEPXRHL 170
           P   +  L+PKLR  FA+ L H S +   +  L TC G GY P  H+
Sbjct: 95  PSPVQAPLLPKLRGHFAEFLNHSSPERLSILYLTTCVGLGYGPNMHI 141


>UniRef50_Q3W219 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 257

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 17/32 (53%), Positives = 18/32 (56%)
 Frame = -2

Query: 565 GGRTESADRARNEPTRPYGRKIRGRPENAGPD 470
           GGR     R  N P R YGR+  GR ENAG D
Sbjct: 219 GGRVRGRSRRGNGPGR-YGRRRHGRAENAGRD 249


>UniRef50_A7SWM8 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 236

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -2

Query: 334 IRFPSKPDTPRSSEPILIPKLRIQFADSLTHYSI 233
           +++P+ P  P SS PI+  +  + FA+  TH+ +
Sbjct: 145 LKYPTSPSAPSSSSPIIFRRTPLGFAEDSTHHPL 178


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,905,475
Number of Sequences: 1657284
Number of extensions: 13018946
Number of successful extensions: 35995
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35982
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)