Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021390
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.55 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.9  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   3.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   3.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   6.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.0  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   9.0  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 196 YGYEPXRHLXVHPSPEFSRSAESIRTPRK 110
           + Y P  H   +P+P +   A+  R  RK
Sbjct: 76  WNYSPDNHFEQYPNPTYYNLADPARDSRK 104


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 571 LNGGRTESADRARNEPTRPYG 509
           L G       +++N PT+PYG
Sbjct: 538 LRGNELLPMQQSQNPPTKPYG 558


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 42  LPERQSMESYRREIWFGTRRA 104
           L +R  +   R ++WF  RRA
Sbjct: 253 LAQRTKLTEARIQVWFSNRRA 273


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 138 PQRVSGHRANAVLFAFRTISPFYRIPW 58
           P R+  +   A    F ++S F++IP+
Sbjct: 23  PHRIHSYFMVAFYVVFSSVSTFFKIPF 49


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 138 PQRVSGHRANAVLFAFRTISPFYRIPW 58
           P R+  +   A    F ++S F++IP+
Sbjct: 23  PHRIHSYFMVAFYVVFSSVSTFFKIPF 49


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 418 LYIFNMTLAKIVLRFGLDPDPRSP 489
           L +  + LA +V  F  DP  R+P
Sbjct: 444 LLVSKVALASVVKDFVFDPTERTP 467


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 138 DLENSGEGCTXRCRXGSYPYPQQVS 212
           D  N G+G + +C      YP  +S
Sbjct: 613 DSINEGDGVSVQCTVSKGDYPLNIS 637


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 344 HRXHPLPVQTRHAPVXRANPYS 279
           +R HPL + + H  +   NP S
Sbjct: 332 NRCHPLSLSSDHQAMLHHNPMS 353


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 481 RSPAFRGSSCRKVVSVRFVRDRH 549
           + P F  SSC + + V  + D H
Sbjct: 200 KRPKFENSSCDEDIDVTNIDDDH 222


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 571 LNGGRTESADRARNEP 524
           ++GGR ++  R +N+P
Sbjct: 16  ISGGRGQNTQRVQNQP 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,762
Number of Sequences: 336
Number of extensions: 3009
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)