Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021389
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    26   0.27 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.35 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.3  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
 Frame = +2

Query: 278 GMFVRLVHF*FQNETIKRTNAPVRSVV-YVILYVPCAILKFY------SLKRIIIF-HMV 433
           G+F  ++ F      + +T   V +V  +V  Y P A + FY      S++ III  H V
Sbjct: 82  GLFC-ILKFALDGLMLDKTGICVSNVFDFVHFYYPVATMSFYVLNFFGSIQFIIISKHWV 140

Query: 434 FLFKHYMF*RERFMRNLGGPI 496
            + K + F  E  MRN G  I
Sbjct: 141 TIMKEWSF-MEMSMRNYGSSI 160


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 432 CFYLNIICFNVNGLCEISVDRFCIIIFSLKIKF 530
           C Y  I+ + ++ + ++ + +FC  +  LK KF
Sbjct: 163 CLYRWIVLYTLSKMSQVMLIQFCAFVVVLKQKF 195


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 605 YLYNKQLSLFTNK*YH*IYKNPYPRK 528
           YLY +Q S  T       Y+ PYPR+
Sbjct: 23  YLYWQQTSNLTTSKLLYTYRQPYPRQ 48


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 314 NETIKRTNAPVRSVVYVILYVPCAILKFY 400
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 314 NETIKRTNAPVRSVVYVILYVPCAILKFY 400
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,566
Number of Sequences: 336
Number of extensions: 2731
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)