Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021387
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6NMF3 Cluster: Uncharacterized protein MBTPS1; n=2; De...    66   7e-10
UniRef50_Q14703 Cluster: Membrane-bound transcription factor sit...    66   7e-10
UniRef50_Q4T2N2 Cluster: Chromosome undetermined SCAF10227, whol...    56   8e-07
UniRef50_Q9VP10 Cluster: CG7169-PA; n=4; Diptera|Rep: CG7169-PA ...    54   4e-06
UniRef50_Q8L7B7 Cluster: Subtilisin-like protein; n=6; Magnoliop...    50   4e-05
UniRef50_Q56JX7 Cluster: Membrane-bound transcription factor sit...    50   4e-05
UniRef50_Q54SL5 Cluster: Putative uncharacterized protein; n=1; ...    45   0.001
UniRef50_A7PEP3 Cluster: Chromosome chr11 scaffold_13, whole gen...    40   0.042
UniRef50_Q2RAA1 Cluster: Expressed protein; n=3; Oryza sativa|Re...    36   0.91 
UniRef50_A5TSL6 Cluster: Putative uncharacterized protein; n=2; ...    36   1.2  
UniRef50_A7BKS7 Cluster: Sodium/calcium exchanger; n=1; Beggiato...    34   3.7  

>UniRef50_A6NMF3 Cluster: Uncharacterized protein MBTPS1; n=2;
           Deuterostomia|Rep: Uncharacterized protein MBTPS1 - Homo
           sapiens (Human)
          Length = 749

 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 25/64 (39%), Positives = 47/64 (73%)
 Frame = +3

Query: 255 VQYEXTDVVKSQHIITFKGYYPRSTRENYVNAALTSAGITDWKIIKRNNPAKEYPSDFDV 434
           V++  T VV+ ++I+ F GY+    R +++++AL S+ + +W+II RNNP+ +YPSDF+V
Sbjct: 45  VEFSST-VVEYEYIVAFNGYFTAKARNSFISSALKSSEVDNWRIIPRNNPSSDYPSDFEV 103

Query: 435 VVLE 446
           + ++
Sbjct: 104 IQIK 107


>UniRef50_Q14703 Cluster: Membrane-bound transcription factor site-1
           protease precursor; n=28; Coelomata|Rep: Membrane-bound
           transcription factor site-1 protease precursor - Homo
           sapiens (Human)
          Length = 1052

 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 25/64 (39%), Positives = 47/64 (73%)
 Frame = +3

Query: 255 VQYEXTDVVKSQHIITFKGYYPRSTRENYVNAALTSAGITDWKIIKRNNPAKEYPSDFDV 434
           V++  T VV+ ++I+ F GY+    R +++++AL S+ + +W+II RNNP+ +YPSDF+V
Sbjct: 45  VEFSST-VVEYEYIVAFNGYFTAKARNSFISSALKSSEVDNWRIIPRNNPSSDYPSDFEV 103

Query: 435 VVLE 446
           + ++
Sbjct: 104 IQIK 107


>UniRef50_Q4T2N2 Cluster: Chromosome undetermined SCAF10227, whole
           genome shotgun sequence; n=4; Deuterostomia|Rep:
           Chromosome undetermined SCAF10227, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 1095

 Score = 56.0 bits (129), Expect = 8e-07
 Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = +3

Query: 276 VVKSQHIITFKGYYPRSTRENYVNAALTSAG--ITDWKIIKRNNPAKEYPSDFDVVVLEN 449
           VV+ ++II F GY+    R  Y+++AL + G  + +W I+ R NPA ++PSDF++V +  
Sbjct: 14  VVEDEYIIGFIGYFSAKARSLYISSALRNTGDDMLEWHIVPRENPASDFPSDFELVHIRQ 73

Query: 450 A 452
           A
Sbjct: 74  A 74


>UniRef50_Q9VP10 Cluster: CG7169-PA; n=4; Diptera|Rep: CG7169-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 1012

 Score = 53.6 bits (123), Expect = 4e-06
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = +3

Query: 270 TDVVKSQHIITFKGYYPRSTRENYVNAALTSAGITDWKIIKRNNPAKEYPSDFDVV 437
           T VV ++ I+ F   Y    RE+Y+ A L  + +T+W+I+ R N A +YPSDFD++
Sbjct: 21  TAVVPNEFIVHFHSKYFAPVRESYIAAKLLGSNVTNWRIVPRLNLAWQYPSDFDIL 76


>UniRef50_Q8L7B7 Cluster: Subtilisin-like protein; n=6;
           Magnoliophyta|Rep: Subtilisin-like protein - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 1038

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 25/67 (37%), Positives = 39/67 (58%)
 Frame = +3

Query: 264 EXTDVVKSQHIITFKGYYPRSTRENYVNAALTSAGITDWKIIKRNNPAKEYPSDFDVVVL 443
           E  +  K+ +II FK Y P      Y+ + + S G   W  I+R NPA +YP+DF V+ +
Sbjct: 49  ESENETKTNYIIRFKQYKPAKDHRIYLESKVRSGG---WGWIERINPATKYPTDFGVLWI 105

Query: 444 ENAGRKA 464
           E +G++A
Sbjct: 106 EESGKEA 112


>UniRef50_Q56JX7 Cluster: Membrane-bound transcription factor site-1
           protease isoform 1 preproprotein-like; n=3;
           Laurasiatheria|Rep: Membrane-bound transcription factor
           site-1 protease isoform 1 preproprotein-like - Bos
           taurus (Bovine)
          Length = 203

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
 Frame = +3

Query: 255 VQYEXTDVVKSQHIITFKGYYPRSTRENYVNAALTSAGITDWKIIKRNNP-------AKE 413
           V++  T VV+ ++I+ F GY+    R +++++AL S+ I +W+II RNNP        K 
Sbjct: 45  VEFSST-VVEYEYIVAFNGYFTAKARNSFISSALKSSAIDNWRIIPRNNPPSNLWKHQKL 103

Query: 414 YPSDFDVVVLEN 449
              D D VVL N
Sbjct: 104 LSIDLDKVVLPN 115


>UniRef50_Q54SL5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1331

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
 Frame = +3

Query: 288 QHIITFKGYYPRSTRENYVNAALT------------SAGITDWKIIKRNNPAKEYPSDFD 431
           ++II FK Y  +   ++Y+N  L                + DWKII RNNPA +YPSDF 
Sbjct: 113 EYIIMFKKYIDQKEHQSYLNEILNRNEKKIKQSIKNQNQLIDWKIIPRNNPASKYPSDFA 172

Query: 432 VVVLENAGRKAWKP-CKITQQ 491
           +V + +  + +  P  KI  Q
Sbjct: 173 LVEITSNKQSSLDPILKILSQ 193


>UniRef50_A7PEP3 Cluster: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr11 scaffold_13, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 210

 Score = 40.3 bits (90), Expect = 0.042
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = +3

Query: 273 DVVKSQHIITFKGYYPRSTRENYVNAALTSAGITDWKIIKRNNPAKEYPSDFDVVVLENA 452
           +  +  +I+ F  Y        Y+   +   G+  W+ I+R NPA ++P+DF VV ++++
Sbjct: 55  EAARRNYIVRFVEYKDAEDHRAYLQGKI---GLDGWEWIERRNPAAKFPTDFGVVAIDDS 111

Query: 453 GRKA 464
            R A
Sbjct: 112 VRTA 115


>UniRef50_Q2RAA1 Cluster: Expressed protein; n=3; Oryza sativa|Rep:
           Expressed protein - Oryza sativa subsp. japonica (Rice)
          Length = 358

 Score = 35.9 bits (79), Expect = 0.91
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = -2

Query: 610 VQSLFAIIPPPRIQTAPDPHHPL*HTLWTV*LDVGCDPSNCWVI-LQGFQAFLPAFSRTT 434
           V SL  ++P   I T  D  HPL +++WT  L +      CW+I L      L AF+  T
Sbjct: 94  VLSLCLLLPWQPIPTEGDGDHPLINSIWTFSL-LALSYMFCWIISLSEAITKLVAFTSIT 152

Query: 433 TSKSLGYSLAGLLRLIIFQSVI 368
               + +++A LL  ++  +VI
Sbjct: 153 YGILMAFAVAHLLGRVVGMAVI 174


>UniRef50_A5TSL6 Cluster: Putative uncharacterized protein; n=2;
           Fusobacterium nucleatum|Rep: Putative uncharacterized
           protein - Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953
          Length = 1716

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
 Frame = +3

Query: 357 TSAGITDWKIIKRNNPAKEYPSDF-DVVVLENA 452
           TSAGIT ++I K NN  KEYP +  D++ L+NA
Sbjct: 515 TSAGITAYEIAKDNNLVKEYPREIEDLLRLKNA 547


>UniRef50_A7BKS7 Cluster: Sodium/calcium exchanger; n=1; Beggiatoa
           sp. SS|Rep: Sodium/calcium exchanger - Beggiatoa sp. SS
          Length = 718

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 25/70 (35%), Positives = 34/70 (48%)
 Frame = +3

Query: 468 KPCKITQQFDGSQPTSSHTVHKVC*RGWCGSGAVCILGGGIIAKRDCTLFENS*PWGTRP 647
           +P   TQ  D +QP    T +++      G+G+  + G GI    DCT    S P GT P
Sbjct: 125 QPGDPTQPGDPTQPPQPPTSYQLSVT-LAGTGSGSVKGSGIDCGTDCT---ESYPPGT-P 179

Query: 648 QTITGCPAPD 677
             +T  PAPD
Sbjct: 180 MMLTAAPAPD 189


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,680,907
Number of Sequences: 1657284
Number of extensions: 14392243
Number of successful extensions: 36549
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 35283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36541
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)