Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021387
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032641-3|CAA21648.1|  200|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical p...    27   9.4  

>AL032641-3|CAA21648.1|  200|Caenorhabditis elegans Hypothetical
           protein Y5F2A.3 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 333 ENYVNAALTSAGITDWKIIKRNNPAKEY 416
           +NY+NA++TS    + K I   +P KEY
Sbjct: 135 KNYINASITSCPPCERKWIVAQHPMKEY 162


>Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical
           protein K01G5.7 protein.
          Length = 449

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = -2

Query: 676 SGAGQPVIVCGRVPHGHEFSKRVQSLFAIIPPPRI-QTAPDPHH 548
           +G+G   ++  ++    EF  R+ S F+++P P++  T  +P++
Sbjct: 143 TGSGMGTLLISKIRE--EFPDRIMSSFSVVPSPKVSDTVVEPYN 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,180,424
Number of Sequences: 27780
Number of extensions: 350820
Number of successful extensions: 960
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)