Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021386
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.2  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +1

Query: 163 QPTVFKQSQPTVFKQSQPTVFKQSQSSPSGASQEQRVSEDNVQIIGNANE 312
           +P    + QPT   +S+PT   Q+   P+ +S  Q+         GN ++
Sbjct: 394 EPVPTPEPQPTQTTESEPT---QASEQPTESSTTQKPQTTKTPESGNESD 440


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/33 (27%), Positives = 12/33 (36%)
 Frame = -2

Query: 511 DQDLNLAAEPSAQLSPTQCYSGTAEKHDPHFQW 413
           D+D+N A      +     Y    E   PH  W
Sbjct: 3   DKDMNSACMRGGSVRTLNNYQQVMEPRSPHTAW 35


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 430 DPHFQWCHLLDLTTDRHC 377
           DP   +C  L++T   HC
Sbjct: 60  DPSADYCLFLEMTLAHHC 77


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 346 TYHVHGQVNISNDDPLLSQ 402
           ++H H  V+ +N +PLLS+
Sbjct: 56  SFHDHVSVSNTNTEPLLSE 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,332
Number of Sequences: 336
Number of extensions: 2152
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)