Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021386
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_27983| Best HMM Match : PAN (HMM E-Value=0.0022) 35 0.072
SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88) 31 0.67
SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.6
SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.6
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 30 1.6
SB_48343| Best HMM Match : CBF (HMM E-Value=1.3) 30 2.1
SB_26218| Best HMM Match : Disintegrin (HMM E-Value=0.85) 30 2.1
SB_17671| Best HMM Match : 7tm_1 (HMM E-Value=0.00083) 30 2.1
SB_11423| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_52473| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0026) 29 2.7
SB_35497| Best HMM Match : PT (HMM E-Value=0.64) 29 2.7
SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12) 29 3.6
SB_1902| Best HMM Match : Paramecium_SA (HMM E-Value=1.4) 29 3.6
SB_30189| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_23501| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13) 29 4.8
SB_36720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_22| Best HMM Match : Disintegrin (HMM E-Value=0.39) 28 6.3
SB_57164| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_5121| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 35.9 bits (79), Expect = 0.031
Identities = 11/41 (26%), Positives = 33/41 (80%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
+Y +S+ P++F+ S+P++++ +P++++ S+P++++ S+ S
Sbjct: 592 MYELSK-PSIFELSKPSIYELLEPSIYELSKPSIYELSKPS 631
Score = 35.1 bits (77), Expect = 0.055
Identities = 12/41 (29%), Positives = 32/41 (78%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
+Y +S+ P++++ S+P++ + S+P++F+ S+P +++ S+ S
Sbjct: 496 IYELSK-PSIYELSKPSIHELSKPSIFELSKPFIYEVSKPS 535
Score = 34.3 bits (75), Expect = 0.096
Identities = 10/39 (25%), Positives = 32/39 (82%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQ 237
+Y++ + P++++ S+P++++ S+P++ + S+P++F+ S+
Sbjct: 488 IYDVGK-PSIYELSKPSIYELSKPSIHELSKPSIFELSK 525
Score = 33.9 bits (74), Expect = 0.13
Identities = 11/41 (26%), Positives = 32/41 (78%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
+Y +S+ P++++ S+P +++ S+P++F+ S+P++++ + S
Sbjct: 576 IYELSK-PSIYELSKPFMYELSKPSIFELSKPSIYELLEPS 615
Score = 33.9 bits (74), Expect = 0.13
Identities = 11/41 (26%), Positives = 32/41 (78%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
+Y +S+ P +++ S+P++F+ S+P++++ +P++++ S+ S
Sbjct: 584 IYELSK-PFMYELSKPSIFELSKPSIYELLEPSIYELSKPS 623
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/41 (29%), Positives = 29/41 (70%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
L N R P+V++ S+P++++ S+P ++ +P++++ S+ S
Sbjct: 463 LENGFRQPSVYEVSKPSIYEISKPYIYDVGKPSIYELSKPS 503
Score = 33.5 bits (73), Expect = 0.17
Identities = 10/34 (29%), Positives = 28/34 (82%)
Frame = +1
Query: 142 PAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
P++++ S+P++++ S+P +++ S+P++F+ S+ S
Sbjct: 574 PSIYELSKPSIYELSKPFMYELSKPSIFELSKPS 607
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/41 (26%), Positives = 31/41 (75%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
+Y +S+ P++ + S+P++F+ S+P +++ S+P++++ + S
Sbjct: 504 IYELSK-PSIHELSKPSIFELSKPFIYEVSKPSIYELLEPS 543
Score = 32.7 bits (71), Expect = 0.29
Identities = 10/41 (24%), Positives = 31/41 (75%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
+Y +S+ P++++ S+P ++ +P++++ S+P++++ S+ S
Sbjct: 472 VYEVSK-PSIYEISKPYIYDVGKPSIYELSKPSIYELSKPS 511
Score = 32.7 bits (71), Expect = 0.29
Identities = 10/41 (24%), Positives = 32/41 (78%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
++ +S+ P++F+ S+P +++ S+P++++ +P++++ S+ S
Sbjct: 512 IHELSK-PSIFELSKPFIYEVSKPSIYELLEPSIYELSKPS 551
Score = 32.7 bits (71), Expect = 0.29
Identities = 10/41 (24%), Positives = 32/41 (78%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
+Y +S+ P++++ +P++++ S+P++++ S+P +++ S+ S
Sbjct: 560 IYELSK-PSIYELLEPSIYELSKPSIYELSKPFMYELSKPS 599
Score = 32.7 bits (71), Expect = 0.29
Identities = 8/29 (27%), Positives = 25/29 (86%)
Frame = +1
Query: 142 PAVFKQSQPTVFKQSQPTVFKQSQPTVFK 228
P++++ S+P++++ S+P++++ S+P ++K
Sbjct: 614 PSIYELSKPSIYELSKPSIYELSKPPIYK 642
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/41 (26%), Positives = 30/41 (73%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
+Y IS+ P ++ +P++++ S+P++++ S+P++ + S+ S
Sbjct: 480 IYEISK-PYIYDVGKPSIYELSKPSIYELSKPSIHELSKPS 519
Score = 31.9 bits (69), Expect = 0.51
Identities = 8/39 (20%), Positives = 32/39 (82%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQ 237
++ +S+ P++++ +P++++ S+P++++ S+P++++ S+
Sbjct: 600 IFELSK-PSIYELLEPSIYELSKPSIYELSKPSIYELSK 637
Score = 31.5 bits (68), Expect = 0.67
Identities = 9/36 (25%), Positives = 28/36 (77%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFK 228
+Y +S+ P++++ S+P++++ S+P ++K +P +++
Sbjct: 616 IYELSK-PSIYELSKPSIYELSKPPIYKLIKPFIYE 650
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/38 (28%), Positives = 29/38 (76%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQS 234
+Y +S+ P+VF+ +P++ + S+P++F+ S+P +++ +
Sbjct: 672 IYELSK-PSVFELIKPSINELSKPSIFELSKPFIYEDA 708
Score = 31.1 bits (67), Expect = 0.89
Identities = 7/32 (21%), Positives = 27/32 (84%)
Frame = +1
Query: 142 PAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQ 237
P++++ S+P++++ +P++++ S+P++++ S+
Sbjct: 558 PSIYELSKPSIYELLEPSIYELSKPSIYELSK 589
Score = 31.1 bits (67), Expect = 0.89
Identities = 10/32 (31%), Positives = 26/32 (81%)
Frame = +1
Query: 142 PAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQ 237
P++++ S+P+VF+ +P++ + S+P++F+ S+
Sbjct: 670 PSIYELSKPSVFELIKPSINELSKPSIFELSK 701
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/36 (25%), Positives = 28/36 (77%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFK 228
+Y + + P +++ S+P++++ +P++++ S+P+VF+
Sbjct: 648 IYEVIK-PFIYEVSKPSIYELLEPSIYELSKPSVFE 682
Score = 29.9 bits (64), Expect = 2.1
Identities = 7/34 (20%), Positives = 27/34 (79%)
Frame = +1
Query: 142 PAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSS 243
P++++ S+P++++ +P++++ S+P++++ + S
Sbjct: 542 PSIYELSKPSIYELIKPSIYELSKPSIYELLEPS 575
Score = 29.5 bits (63), Expect = 2.7
Identities = 7/36 (19%), Positives = 29/36 (80%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFK 228
++ +S+ P +++ S+P++++ +P++++ S+P++++
Sbjct: 520 IFELSK-PFIYEVSKPSIYELLEPSIYELSKPSIYE 554
>SB_27983| Best HMM Match : PAN (HMM E-Value=0.0022)
Length = 616
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 468 LRRNAILVLLRSTIHTFNGVIFLT*QRIVIANVNLTVHVIR--DTLTMVRARQRLVGVSD 295
+R + +V +R +H V +VI NL V IR T+ ++RA LV + D
Sbjct: 295 IRADVHVVTIRGNLHV---VTIRANLHVVIIRANLHVVTIRANSTVPIIRANLHLVTIRD 351
Query: 294 NLHVV 280
NLHVV
Sbjct: 352 NLHVV 356
>SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88)
Length = 841
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLKTAGLRE 132
DC V DC V DC K V DC K LR+
Sbjct: 225 DCCKEVKYDCCKDVTNDCCKEVKYDCCKDLTLRK 258
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLKTAGLRE 132
DC V DC V DC K V DC K LR+
Sbjct: 380 DCCKKVKYDCCKDVTNDCCKEVKYDCCKDLTLRK 413
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLK 150
DC V DC V DC K V DC K
Sbjct: 276 DCCKEVKYDCCKEVKYDCCKEVKYDCCK 303
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLK 150
DC V DC + DC K V DC K
Sbjct: 161 DCCKEVKYDCCKDLTYDCCKEVQNDCCK 188
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLK 150
DC + DC V DC K V DC K
Sbjct: 169 DCCKDLTYDCCKEVQNDCCKEVKYDCCK 196
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLK 150
DC V DC + DC K V DC K
Sbjct: 209 DCCKEVKYDCCKDLKNDCCKEVKYDCCK 236
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLK 150
DC + DC V DC K V DC K
Sbjct: 268 DCCKDLTNDCCKEVKYDCCKEVKYDCCK 295
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLK 150
DC V DC + DC K V DC K
Sbjct: 316 DCCKEVKYDCCKDLTYDCCKEVQNDCCK 343
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLK 150
DC + DC V DC K V DC K
Sbjct: 324 DCCKDLTYDCCKEVQNDCCKEVKYDCCK 351
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 233 DCLNTVGCDCLNTVGCDCLKTVGCDCLK 150
DC V DC + DC K V DC K
Sbjct: 364 DCCKEVKYDCCKDLTNDCCKKVKYDCCK 391
>SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1050
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -1
Query: 239 LCDCLNTVGCD---CLNTVGCDCLKTVGCDC 156
LCDC N CD L+ L+TVGC+C
Sbjct: 332 LCDCKNNGTCDFDTVLSVNNASKLRTVGCNC 362
>SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 868
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -1
Query: 239 LCDCLNTVGCD---CLNTVGCDCLKTVGCDC 156
LCDC N CD L+ L+TVGC+C
Sbjct: 158 LCDCKNNGTCDFDTVLSVNNASKLRTVGCNC 188
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 226 KQSQSSPSGASQEQRVSEDNVQIIGNANEPLTRTYHSQGVTYHVHGQVNISNDDPLLS 399
+ S++ PS + + R S++ V+ + + T + H G T H H V + DD L+
Sbjct: 241 RPSRTRPSSSQRSYRESQEQVRSPSSMSLSSTES-HDSGSTIHSHMSVPVQKDDVALN 297
>SB_48343| Best HMM Match : CBF (HMM E-Value=1.3)
Length = 669
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 247 SGASQEQRVSEDNVQIIGNANEPLTRTYHSQ--GVTYHVHGQVNISNDDPLLSQEDDTIE 420
+G S++ RV D +A +P+ + S G H H N+ +DD +DD +
Sbjct: 128 AGISRKSRVYLDTWS--SDAEDPVDNLFTSTIAGEERHHHRHSNVDDDDDECDDDDDDED 185
Query: 421 SVDRASQQYQNSIASETAAQRA 486
D + + S + T ++A
Sbjct: 186 DDDDDDEDFYKSDLARTGLRKA 207
>SB_26218| Best HMM Match : Disintegrin (HMM E-Value=0.85)
Length = 604
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1
Query: 290 CTLSSLTRCS*LAPDGELCDCLNTVGCDCLNTVGCDCLKTVGCDCLKTA 144
C L+ + C G CD + CD + CD K+ CD K++
Sbjct: 243 CDLTKSSTCD--LTKGSTCDLTKSSTCDLTKSSTCDLTKSSTCDLTKSS 289
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 290 CTLSSLTRCS*LAPDGELCDCLNTVGCDCLNTVGCDCLKTVGCDCLKTA 144
C L+ + C L + CD + CD + CD K+ CD K++
Sbjct: 154 CDLTKSSTCD-LTRNYSTCDLTKSSTCDLTKSSTCDLTKSSTCDLTKSS 201
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 245 GELCDCLNTVGCDCLNTVGCDCLKTVGCDCLKTA 144
G CD + CD + CD K+ CD K++
Sbjct: 7 GSTCDLTKSSTCDLTKSSTCDLTKSSTCDLTKSS 40
>SB_17671| Best HMM Match : 7tm_1 (HMM E-Value=0.00083)
Length = 585
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 271 VSEDNVQIIGNANEPLTRTYHSQGVTYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQ 450
+S DN II + N + + + + YH + ++IS+D+ ++ D+T S + +
Sbjct: 462 ISSDNTIIIYHDNTTTSISSDNTIIIYHDNTTISISSDNTIIIYHDNTTISSNIIIIYHD 521
Query: 451 NSIAS 465
N+I S
Sbjct: 522 NTIIS 526
>SB_11423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Frame = +1
Query: 121 LYNISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSSPSGASQEQRVSEDNVQIIG 300
L ++ P + + PT + QP + SG + + ++ +
Sbjct: 100 LQELASKPKPIESTGPTALYPKTDCQYPDQQPVALPEDPEPNSGIGPLTKEQIEQIKAVE 159
Query: 301 NANEPLTRTYHSQGVTYHVHGQ---VNISNDDPLLSQEDDT--IESVDRASQQYQNSIAS 465
NA E TR + +HG S+ S E+ T + S D ++ + ++I +
Sbjct: 160 NAYEDCTRLDEALKRMEALHGSTITAPTSDTTTTTSAENSTAAVTSTDSSTAAFYSAIGT 219
Query: 466 ETAAQRAL 489
AA ++
Sbjct: 220 LNAANESI 227
>SB_52473| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0026)
Length = 936
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 130 ISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVF 225
+++SP +F PT+F PT+ PT+F
Sbjct: 772 VTQSPTLFVTQSPTLFVTQSPTLCVTQSPTLF 803
>SB_35497| Best HMM Match : PT (HMM E-Value=0.64)
Length = 187
Score = 29.5 bits (63), Expect = 2.7
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Frame = +1
Query: 130 ISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSSPSGASQ--EQRVSEDNVQIIGN 303
++R PA SQP SQ SQ SQS SQ Q VS+ Q +
Sbjct: 16 VTRQPASQPASQPASQPASQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQ 75
Query: 304 ANEPLTRTYHSQGVTYHVHGQVNISNDDPLLSQEDDTI-ESVDRASQQYQNSIASETAAQ 480
+ SQ V+ V V+ S + ++ +SV ++ Q + S++ +Q
Sbjct: 76 SVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQ 135
Query: 481 RALQ 492
Q
Sbjct: 136 SVSQ 139
>SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12)
Length = 519
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 205 QSQPTVFKQSQSSPSGASQEQRVSEDNVQIIGNANEPLTRTYH-SQGVTYHVHGQVNISN 381
+ Q TV+K+ ++ P GA V ED + + N + +T T S VTY HG S
Sbjct: 146 RKQGTVYKEYRTIPRGALNIAAVYEDPITM--NTIDFVTNTTSASSDVTYKNHG----SP 199
Query: 382 DDPLLSQEDDTIESVDRASQQY 447
D + + T +S+DR ++ Y
Sbjct: 200 YDEVTA--TSTYQSLDRTTRTY 219
>SB_1902| Best HMM Match : Paramecium_SA (HMM E-Value=1.4)
Length = 129
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -1
Query: 290 CTLSSLTRCS*LAPDGELCDCLNTV--GCDCLNTVGCDCLKTVGCDCLKTAGLREM 129
CT C+ + DG C N V GC + T GC ++T GC + T G M
Sbjct: 78 CTNMVKDECTNMVKDG----CTNMVKHGCTNMVTDGCTNMETDGCTNMVTDGCTNM 129
>SB_30189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3
Query: 615 DSGESNKSGDCDNTSFDG*VDYKRETLGKFHSSVVTKI*TSLQSPLRSC 469
D G+ GD D+ SFDG + T +HSS++ + + L +C
Sbjct: 26 DDGDGGNDGDDDDDSFDGCCELTVLTNIDYHSSILFQQNNNGSEELAAC 74
>SB_23501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 YNISRSPAVF-KQSQPTVF-KQSQPTVFKQSQPTVFKQSQSSPSGASQEQRVS 276
Y + P+ + +Q QP+ + +Q QP+ + Q Q + Q PSG Q Q+ S
Sbjct: 358 YGQQQQPSGYGQQQQPSGYGQQQQPSGYGQQQQSSGYGQQQQPSGYGQRQQPS 410
>SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13)
Length = 899
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 136 RSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSSPS 249
RSP ++S P V ++ P VF S+P + + S S
Sbjct: 584 RSPRPRRRSSPNVHRERSPEVFDSSRPPLVSEEDLSLS 621
>SB_36720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 247 SGASQEQRVSEDNVQIIGNANEPLTRTYHSQ--GVTYHVHGQVNISNDDPLLSQEDDTIE 420
+G S+E RV D I +A +P+ + S G H H N+ +DD +DD +
Sbjct: 54 AGISRESRVYLDTW--ISDAEDPVDNLFTSTIAGEERHHHRHSNVDDDDDECDDDDDDDD 111
Query: 421 SVD 429
D
Sbjct: 112 DDD 114
>SB_22| Best HMM Match : Disintegrin (HMM E-Value=0.39)
Length = 226
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = -1
Query: 290 CTLSSLTRCS*LAPDGELCDCLNTVGCDCLNTVGCDCLKTVGCDCLKTA 144
C L+ + C + G C+ + CD + CD K+ CD K++
Sbjct: 9 CDLTKSSTCDLIK--GSTCELTKSSTCDLAKSSTCDLTKSSPCDLTKSS 55
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -1
Query: 290 CTLSSLTRCS*LAPDGELCDCLNTVGCDCLNTVGCDCLKTVGCDCLKTA 144
C L+ + C G CD + CD CD K+ CD + +
Sbjct: 49 CDLTKSSTCD--LTKGSTCDLTKSSTCDLTRNSTCDLTKSSTCDLTRNS 95
>SB_57164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 184 SQPTVFKQSQPTVFKQSQSSPSGASQEQR-VSEDNVQIIGNANEPLTRTYHSQGVTY-HV 357
+Q + ++ Q V + + AS++ R + EDN + + + PL++T + VT+ HV
Sbjct: 48 TQHYLHEKPQRQVHTPNSTCNGNASRQHRVIIEDNSESMVMEHVPLSQTISTSVVTHAHV 107
Query: 358 HGQVNISNDDPLLS 399
+G SN PL S
Sbjct: 108 NGG-RASNKRPLTS 120
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 280 DNVQIIGNA-NEPLTRTYHSQG-VTYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQN 453
D+VQ+ N+ N + + ++ V HV G V + D E D + +DR +N
Sbjct: 224 DSVQVTENSYNNAVKKIVEARKRVREHVSGLVRVLRD-----HERDMVSELDRVQIDLRN 278
Query: 454 SIASETAAQ 480
SI SE +Q
Sbjct: 279 SILSEKKSQ 287
>SB_5121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 184 SQPTVFKQSQPTVFKQSQSSPSGASQEQR-VSEDNVQIIGNANEPLTRTYHSQGVTY-HV 357
+Q + ++ Q V + + AS++ R + EDN + + + PL++T + VT+ HV
Sbjct: 48 TQHYLHEKPQRQVHTPNSTCNGNASRQHRVIIEDNSESMVMEHVPLSQTISTSVVTHAHV 107
Query: 358 HGQVNISNDDPLLS 399
+G SN PL S
Sbjct: 108 NGG-RASNKRPLTS 120
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,220,789
Number of Sequences: 59808
Number of extensions: 303020
Number of successful extensions: 1227
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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