Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021386
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 32 0.45
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 32 0.45
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 31 0.60
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical pr... 30 1.8
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 30 1.8
Z81117-11|CAC42336.1| 383|Caenorhabditis elegans Hypothetical p... 29 2.4
Z81117-10|CAB03311.1| 384|Caenorhabditis elegans Hypothetical p... 29 3.2
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 29 3.2
U21282-1|AAA84395.1| 385|Caenorhabditis elegans cyclin B3 protein. 29 3.2
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 29 4.2
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 29 4.2
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 29 4.2
AF089729-1|AAD04156.1| 458|Caenorhabditis elegans SMG-7 protein. 29 4.2
AC024204-5|AAF36043.1| 458|Caenorhabditis elegans Suppressor wi... 29 4.2
Z81589-7|CAB61028.1| 63|Caenorhabditis elegans Hypothetical pr... 28 5.5
X53245-1|CAA37335.1| 63|Caenorhabditis elegans metallothionein... 28 5.5
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 28 5.5
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 28 5.5
M92910-1|AAA28111.1| 63|Caenorhabditis elegans metallothionein... 28 5.5
M32387-1|AAA28118.1| 63|Caenorhabditis elegans protein ( C.ele... 28 5.5
M32386-1|AAA28117.1| 63|Caenorhabditis elegans protein ( C.ele... 28 5.5
D17365-1|BAA04181.1| 63|Caenorhabditis elegans metallothionein... 28 5.5
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 28 7.3
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 28 7.3
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 28 7.3
Z82273-1|CAB54978.2| 565|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z82263-7|CAJ76937.1| 565|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z73424-4|CAA97778.2| 954|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 9.7
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 9.7
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 9.7
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 9.7
AC024206-6|AAF36048.2| 243|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 130 ISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVF---KQSQSSPSGASQEQRVSEDNVQIIG 300
IS SP V+ + T + QPTV +Q VF K S GASQ +S D G
Sbjct: 2131 ISNSPVVYLAAN-TFHQLPQPTVVGVAQNLVFSLNKWDNSYSYGASQRSALSMDPSNAEG 2189
Query: 301 NANEPLT 321
+ PLT
Sbjct: 2190 QVSLPLT 2196
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 130 ISRSPAVFKQSQPTVFKQSQPTVFKQSQPTVF---KQSQSSPSGASQEQRVSEDNVQIIG 300
IS SP V+ + T + QPTV +Q VF K S GASQ +S D G
Sbjct: 2131 ISNSPVVYLAAN-TFHQLPQPTVVGVAQNLVFSLNKWDNSYSYGASQRSALSMDPSNAEG 2189
Query: 301 NANEPLT 321
+ PLT
Sbjct: 2190 QVSLPLT 2196
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 31.5 bits (68), Expect = 0.60
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +1
Query: 169 TVFKQSQPTVFKQSQPTVFKQSQSSPSGASQEQRVSEDNVQIIGNANEPLTRTYHSQGVT 348
TVF++ +F SQP S S PS ++ E SED + EP
Sbjct: 210 TVFRRDDVRLFFNSQPWKNSLSTSDPSISATEAEASEDPEHLDDVITEPAPPI------- 262
Query: 349 YHVHGQVNISNDDPLLSQ--EDDTIESVDRASQQYQNSI 459
G+ +S+D+ + ED+ + VDR +Q +N +
Sbjct: 263 ----GEQTLSDDEEEEEEVPEDEADDEVDREIRQLENEL 297
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
protein C11E4.6 protein.
Length = 1170
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 465 GDSCAEGSAARFRSWSQLMSEISPRSPA 548
GD+CA S ++F W + IS R PA
Sbjct: 459 GDNCAYNSPSKFNEWQKSQLTISNRPPA 486
>Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical
protein T05E11.4 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 349 YHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNSIASET 471
YH Q ++S DD +++DD I+S A +++QN I +++
Sbjct: 386 YHEDSQCSLSTDDDREAKDDDYIDS--DAEEKFQNMIDNDS 424
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/79 (22%), Positives = 34/79 (43%)
Frame = +1
Query: 256 SQEQRVSEDNVQIIGNANEPLTRTYHSQGVTYHVHGQVNISNDDPLLSQEDDTIESVDRA 435
S E+ ++ +I G +E L V++ +N+ DDPLL T E +D
Sbjct: 415 SIEEERKKNTGRIRGGGDERLAWRQACNAVSF---SPLNVHKDDPLLQVYSTTQEKLDAV 471
Query: 436 SQQYQNSIASETAAQRALQ 492
+ Q + + +R ++
Sbjct: 472 TSQLEKEVKKSKGYEREIE 490
>Z81117-11|CAC42336.1| 383|Caenorhabditis elegans Hypothetical
protein T06E6.2b protein.
Length = 383
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 238 SSPSGASQEQRVSEDNVQIIGNANEPLTRTYHSQGVT---YHVHG-QVNISNDDPL 393
+S Q++R + + + N +EP + HS+G+T H+ G +++ + DPL
Sbjct: 12 TSQDSRHQQKRKQAEQLDALKNPSEPAAKKQHSKGLTELRAHISGFKIDSAKRDPL 67
>Z81117-10|CAB03311.1| 384|Caenorhabditis elegans Hypothetical
protein T06E6.2a protein.
Length = 384
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 238 SSPSGASQEQRVSEDNVQIIGNANEPLTRTYHSQGVT---YHVHG-QVNISNDDPL 393
S Q++R + + + N +EP + HS+G+T H+ G +++ + DPL
Sbjct: 13 SQADSRHQQKRKQAEQLDALKNPSEPAAKKQHSKGLTELRAHISGFKIDSAKRDPL 68
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 139 SPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSSPSGASQEQRVSE 279
+P F +QPT+ S T+F Q+ P + A +E R ++
Sbjct: 231 APPAFFSAQPTIATSSPSTIFPQTAPLDYSHRLMKNEEAEEEYREND 277
>U21282-1|AAA84395.1| 385|Caenorhabditis elegans cyclin B3 protein.
Length = 385
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 238 SSPSGASQEQRVSEDNVQIIGNANEPLTRTYHSQGVT---YHVHG-QVNISNDDPL 393
S Q++R + + + N +EP + HS+G+T H+ G +++ + DPL
Sbjct: 14 SQADSRHQQKRKQAEQLDALKNPSEPAAKKQHSKGLTELRAHISGFKIDSAKRDPL 69
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +1
Query: 346 TYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQ 492
T + +N+ DDPLL T E +D + Q + + +R ++
Sbjct: 440 TQKLAAALNVHKDDPLLQVYSTTQEKLDAVTSQLEKEVKKSKGYEREIE 488
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +1
Query: 346 TYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQ 492
T + +N+ DDPLL T E +D + Q + + +R ++
Sbjct: 468 TQKLAAALNVHKDDPLLQVYSTTQEKLDAVTSQLEKEVKKSKGYEREIE 516
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/80 (21%), Positives = 32/80 (40%)
Frame = +1
Query: 172 VFKQSQPTVFKQSQPTVFKQSQSSPSGASQEQRVSEDNVQIIGNANEPLTRTYHSQGVTY 351
VF T K++Q + S S +E+ +++++ GN E V
Sbjct: 120 VFSGKTKTEAKRTQQDYYPTDDESSSEEEEEEEEGDNDIEDAGNTVEVKIEPIDLDDVDE 179
Query: 352 HVHGQVNISNDDPLLSQEDD 411
+ G + D ++ +EDD
Sbjct: 180 AIDGNPETNLDQIVVKREDD 199
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +1
Query: 346 TYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQ 492
T + +N+ DDPLL T E +D + Q + + +R ++
Sbjct: 440 TQKLAAALNVHKDDPLLQVYSTTQEKLDAVTSQLEKEVKKSKGYEREIE 488
>AF089729-1|AAD04156.1| 458|Caenorhabditis elegans SMG-7 protein.
Length = 458
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 313 PLTRTYHSQGVTYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNS---IASETAAQR 483
PLTRT +Q + + +D + +ED S D + Q ++S SE++ +
Sbjct: 374 PLTRTQLAQKLVEIEDEDESKDSDQSTIPEEDQKSLSTDTSRIQNEDSEPESESESSDEE 433
Query: 484 ALQRGLDLGHN 516
LQRG G N
Sbjct: 434 VLQRGRRRGRN 444
>AC024204-5|AAF36043.1| 458|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 7 protein.
Length = 458
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 313 PLTRTYHSQGVTYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNS---IASETAAQR 483
PLTRT +Q + + +D + +ED S D + Q ++S SE++ +
Sbjct: 374 PLTRTQLAQKLVEIEDEDESKDSDQSTIPEEDQKSLSTDTSRIQNEDSEPESESESSDEE 433
Query: 484 ALQRGLDLGHN 516
LQRG G N
Sbjct: 434 VLQRGRRRGRN 444
>Z81589-7|CAB61028.1| 63|Caenorhabditis elegans Hypothetical
protein T08G5.10 protein.
Length = 63
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = -1
Query: 236 CDCLNTVGCDC-LNTVGCDCLKTVGCD--CLKTAGLREML*S*CDDG 105
CDC N C C T CDC C+ C TA ++ S C G
Sbjct: 5 CDCKNQ-NCSCNTGTKDCDCSDAKCCEQYCCPTASEKKCCKSGCAGG 50
>X53245-1|CAA37335.1| 63|Caenorhabditis elegans metallothionein-II
protein.
Length = 63
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = -1
Query: 236 CDCLNTVGCDC-LNTVGCDCLKTVGCD--CLKTAGLREML*S*CDDG 105
CDC N C C T CDC C+ C TA ++ S C G
Sbjct: 5 CDCKNQ-NCSCNTGTKDCDCSDAKCCEQYCCPTASEKKCCKSGCAGG 50
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
protein F57F4.4 protein.
Length = 2090
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 538 LGEISLISCDQDLNLAAEPSAQLSPTQCYSGTAEKHDPH 422
LG ++ CD DL + +Q +CYSG + D +
Sbjct: 493 LGGVNACCCDNDLCIDPNRGSQRPQLRCYSGVSIPQDKY 531
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 538 LGEISLISCDQDLNLAAEPSAQLSPTQCYSGTAEKHDPH 422
LG ++ CD DL + +Q +CYSG + D +
Sbjct: 493 LGGVNACCCDNDLCIDPNRGSQRPQLRCYSGVSIPQDKY 531
>M92910-1|AAA28111.1| 63|Caenorhabditis elegans metallothionein-2
protein.
Length = 63
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = -1
Query: 236 CDCLNTVGCDC-LNTVGCDCLKTVGCD--CLKTAGLREML*S*CDDG 105
CDC N C C T CDC C+ C TA ++ S C G
Sbjct: 5 CDCKNQ-NCSCNTGTKDCDCSDAKCCEQYCCPTASEKKCCKSGCAGG 50
>M32387-1|AAA28118.1| 63|Caenorhabditis elegans protein (
C.elegans metallothionein-like protein (MT-Ce) mRNA,
clone MTCe-2, complete cds.).
Length = 63
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = -1
Query: 236 CDCLNTVGCDC-LNTVGCDCLKTVGCD--CLKTAGLREML*S*CDDG 105
CDC N C C T CDC C+ C TA ++ S C G
Sbjct: 5 CDCKNQ-NCSCNTGTKDCDCSDAKCCEQYCCPTASEKKCCKSGCAGG 50
>M32386-1|AAA28117.1| 63|Caenorhabditis elegans protein (
C.elegans metallothionein-like protein (MT-Ce) mRNA,
clone MTCe-1, complete cds.).
Length = 63
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = -1
Query: 236 CDCLNTVGCDC-LNTVGCDCLKTVGCD--CLKTAGLREML*S*CDDG 105
CDC N C C T CDC C+ C TA ++ S C G
Sbjct: 5 CDCKNQ-NCSCNTGTKDCDCSDAKCCEQYCCPTASEKKCCKSGCAGG 50
>D17365-1|BAA04181.1| 63|Caenorhabditis elegans metallothionein-II
protein.
Length = 63
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = -1
Query: 236 CDCLNTVGCDC-LNTVGCDCLKTVGCD--CLKTAGLREML*S*CDDG 105
CDC N C C T CDC C+ C TA ++ S C G
Sbjct: 5 CDCKNQ-NCSCNTGTKDCDCSDAKCCEQYCCPTASEKKCCKSGCAGG 50
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 421 SVDRASQQYQNSIASETAAQRALQ 492
S+D+A Q++ N + S+ QRA Q
Sbjct: 293 SIDKARQEFTNGVMSDAGVQRATQ 316
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/82 (24%), Positives = 33/82 (40%)
Frame = +1
Query: 220 VFKQSQSSPSGASQEQRVSEDNVQIIGNANEPLTRTYHSQGVTYHVHGQVNISNDDPLLS 399
+F S + E+ ED ++I E L R+Y + N N PLL
Sbjct: 201 IFMASLNILEATDNEKEADEDFREVIRLIKE-LNRSYPDYNPLFEFEKLNNPQNSFPLLY 259
Query: 400 QEDDTIESVDRASQQYQNSIAS 465
+TI+ + S+ + +I S
Sbjct: 260 PVYETIQEYSKISETLETTILS 281
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 421 SVDRASQQYQNSIASETAAQRALQ 492
S+D+A Q++ N + S+ QRA Q
Sbjct: 293 SIDKARQEFTNGVMSDAGVQRATQ 316
>Z82273-1|CAB54978.2| 565|Caenorhabditis elegans Hypothetical
protein F56F12.1 protein.
Length = 565
Score = 27.5 bits (58), Expect = 9.7
Identities = 27/106 (25%), Positives = 47/106 (44%)
Frame = +1
Query: 133 SRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSSPSGASQEQRVSEDNVQIIGNANE 312
S+SPA + S + T+ ++ +P S+SSP+ ASQ S N+ + E
Sbjct: 337 SKSPAPYSTSSTDHYG----TIRRKHKPVAIDLSKSSPNLASQ----SPSNLFFGASFEE 388
Query: 313 PLTRTYHSQGVTYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQ 450
R+ + +Y G N S +D L+Q + S++ Y+
Sbjct: 389 KQNRSPMTSTPSYKEQGFKNDSLNDS-LNQAFEIASSIETTKNAYE 433
>Z82263-7|CAJ76937.1| 565|Caenorhabditis elegans Hypothetical
protein F56F12.1 protein.
Length = 565
Score = 27.5 bits (58), Expect = 9.7
Identities = 27/106 (25%), Positives = 47/106 (44%)
Frame = +1
Query: 133 SRSPAVFKQSQPTVFKQSQPTVFKQSQPTVFKQSQSSPSGASQEQRVSEDNVQIIGNANE 312
S+SPA + S + T+ ++ +P S+SSP+ ASQ S N+ + E
Sbjct: 337 SKSPAPYSTSSTDHYG----TIRRKHKPVAIDLSKSSPNLASQ----SPSNLFFGASFEE 388
Query: 313 PLTRTYHSQGVTYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQ 450
R+ + +Y G N S +D L+Q + S++ Y+
Sbjct: 389 KQNRSPMTSTPSYKEQGFKNDSLNDS-LNQAFEIASSIETTKNAYE 433
>Z73424-4|CAA97778.2| 954|Caenorhabditis elegans Hypothetical
protein C44B9.1 protein.
Length = 954
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = +1
Query: 223 FKQSQSSPSGASQEQRVSEDNVQII-GNANEPLTRTYHSQGVTYH--VHGQVNISNDDPL 393
FK+ + EQ S+ +V+++ N NE + +Y + + + + N N P
Sbjct: 4 FKEQLAKTVNQIGEQFSSDSDVKVLLDNMNEKVMSSYDAPSCSESPPIAPESNSQNSTPR 63
Query: 394 -----LSQEDDTIESVDRA 435
+S+EDD I S+D A
Sbjct: 64 RVKSKISEEDDVINSIDAA 82
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 236 CDCLNTVGCDCLNTVGCDCLKTVGCDC 156
CDCLN CD ++ C C+ G C
Sbjct: 292 CDCLNNQNCDS-SSGECKCIGWTGKHC 317
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 236 CDCLNTVGCDCLNTVGCDCLKTVGCDC 156
CDCLN CD ++ C C+ G C
Sbjct: 292 CDCLNNQNCDS-SSGECKCIGWTGKHC 317
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 236 CDCLNTVGCDCLNTVGCDCLKTVGCDC 156
CDCLN CD ++ C C+ G C
Sbjct: 292 CDCLNNQNCDS-SSGECKCIGWTGKHC 317
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 236 CDCLNTVGCDCLNTVGCDCLKTVGCDC 156
CDCLN CD ++ C C+ G C
Sbjct: 292 CDCLNNQNCDS-SSGECKCIGWTGKHC 317
>AC024206-6|AAF36048.2| 243|Caenorhabditis elegans Hypothetical
protein Y74C9A.1 protein.
Length = 243
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +1
Query: 154 KQSQPTVFKQSQPTVFKQSQPTVFKQSQSSPSGASQEQRVSEDNVQIIGNANEPLTRTYH 333
+ ++PT T+F+ +F +++++ + AS+E ++ +QI N+N R+YH
Sbjct: 169 ENAEPTRINHVIATLFRNHIGEIFTKARTAEARASEEAQI---RIQIQDNSN-AFQRSYH 224
Query: 334 S 336
+
Sbjct: 225 N 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,642,480
Number of Sequences: 27780
Number of extensions: 208708
Number of successful extensions: 836
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -