Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021384
(679 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g47740.2 68414.m05309 expressed protein 79 2e-15
At1g47740.1 68414.m05308 expressed protein 79 2e-15
At1g80690.1 68414.m09468 expressed protein 72 4e-13
At5g25170.1 68418.m02984 expressed protein 71 5e-13
At2g25190.1 68415.m03012 expressed protein 69 4e-12
At5g47310.1 68418.m05832 expressed protein 66 2e-11
At4g17486.1 68417.m02616 expressed protein 64 8e-11
At4g31980.1 68417.m04547 expressed protein contains Pfam profile... 62 2e-10
At4g25680.1 68417.m03697 expressed protein 34 0.075
At4g25660.1 68417.m03695 expressed protein 34 0.075
At4g08370.1 68417.m01382 proline-rich extensin-like family prote... 31 0.93
At5g19350.1 68418.m02306 RNA-binding protein 45 (RBP45), putative 30 1.2
At4g33890.2 68417.m04809 expressed protein 30 1.6
At4g33890.1 68417.m04808 expressed protein 30 1.6
At2g18770.1 68415.m02185 expressed protein 29 2.1
At3g23590.1 68416.m02967 expressed protein 28 4.9
At3g07090.1 68416.m00843 expressed protein 28 4.9
At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing ... 28 4.9
At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing ... 28 4.9
At5g60870.2 68418.m07635 regulator of chromosome condensation (R... 28 6.5
At5g60870.1 68418.m07636 regulator of chromosome condensation (R... 28 6.5
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 28 6.5
At5g39970.1 68418.m04847 expressed protein low similarity to up-... 27 8.6
At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kina... 27 8.6
>At1g47740.2 68414.m05309 expressed protein
Length = 279
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +3
Query: 312 SQHPRPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEIS 491
S + PG+A V LNVYD+ N Y AGLG+FHSGV+VHG E+A+G H YA +GVFE+
Sbjct: 61 SNNHGPGRAPVYLNVYDLTPINGYIYWAGLGIFHSGVEVHGVEYAFGAHDYATSGVFEVE 120
Query: 492 PQ 497
P+
Sbjct: 121 PR 122
>At1g47740.1 68414.m05308 expressed protein
Length = 279
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +3
Query: 312 SQHPRPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEIS 491
S + PG+A V LNVYD+ N Y AGLG+FHSGV+VHG E+A+G H YA +GVFE+
Sbjct: 61 SNNHGPGRAPVYLNVYDLTPINGYIYWAGLGIFHSGVEVHGVEYAFGAHDYATSGVFEVE 120
Query: 492 PQ 497
P+
Sbjct: 121 PR 122
>At1g80690.1 68414.m09468 expressed protein
Length = 227
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +3
Query: 291 LLSRRSDSQHPRPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAF 470
+L R++ S R G V LNVYD+ N Y GLGV+HSGV+VHG E+AYG H Y
Sbjct: 1 MLCRKNSSLVDR-GNVPVYLNVYDLTPINGYAYWLGLGVYHSGVEVHGIEYAYGAHEYPS 59
Query: 471 TGVFEISPQ 497
TG+FE P+
Sbjct: 60 TGIFEGEPK 68
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 514 EQFRFRQSVHIGYTDFSEEEVRRLVAELG-KHSE*QIPFNDNNCNHFTSAFCM 669
E F FR+S+ IG TD EVR + +L + NCNHF C+
Sbjct: 71 EGFTFRKSILIGKTDLGPLEVRATMEQLADNYKGSSYNLITKNCNHFCDETCI 123
>At5g25170.1 68418.m02984 expressed protein
Length = 218
Score = 71.3 bits (167), Expect = 5e-13
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 324 RPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPQ 497
+PG V LNVYD+ N Y GLG++HSGV+VHG E+ +G H ++ TG+FE+ P+
Sbjct: 14 KPGSVPVYLNVYDLTPINGYAYWLGLGIYHSGVEVHGVEYGFGAHDHSTTGIFEVEPK 71
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 520 FRFRQSVHIGYTDFSEEEVRRLVAELGK-HSE*QIPFNDNNCNHFTSAFCM 669
F FR+S+ IG TD E VR + +L + +S NCNHF + C+
Sbjct: 76 FTFRKSILIGRTDLDPENVRVFMEKLAEEYSGNSYHLITKNCNHFCNDVCV 126
>At2g25190.1 68415.m03012 expressed protein
Length = 240
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +3
Query: 291 LLSRRSDSQHPRPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAF 470
L + S + + G V LNVYD+ N Y GLGVFHSGV+VHG E+A+G H +
Sbjct: 2 LCFKGSVKRKKQSGSVPVYLNVYDLTPMNAYGYWLGLGVFHSGVEVHGVEYAFGAHESSS 61
Query: 471 TGVFEISPQ 497
TG+FE+ P+
Sbjct: 62 TGIFEVEPK 70
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 520 FRFRQSVHIGYTDFSEEEVRRLVAELG-KHSE*QIPFNDNNCNHFTSAFCM 669
F FR+S+ +G TD +EVR + +L ++ + NCNHF + C+
Sbjct: 75 FTFRKSILVGKTDLVAKEVRVFMEKLAEEYQGNKYHLITRNCNHFCNEVCL 125
>At5g47310.1 68418.m05832 expressed protein
Length = 245
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +3
Query: 342 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPQT 500
V LNVYD+ N Y GLG+FHSG++ HG E+ YG H Y+ +GVFE+ P++
Sbjct: 30 VYLNVYDLTPVNNYLYWFGLGIFHSGIEAHGFEYGYGAHEYSSSGVFEVEPRS 82
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 520 FRFRQSVHIGYTDFSEEEVRRLVAELG-KHSE*QIPFNDNNCNHFTSAFCM 669
F FR+SV +G T S + R + +L K+ NCNHFT C+
Sbjct: 86 FIFRRSVLLGTTSMSRSDFRSFMEKLSRKYHGDTYHLIAKNCNHFTEEVCL 136
>At4g17486.1 68417.m02616 expressed protein
Length = 224
Score = 64.1 bits (149), Expect = 8e-11
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +3
Query: 270 MFPSCMSLLSRRSDSQHPRPGQAT---VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSE 440
M+ +S S SD + G+A V LNVYD+ N Y G+G+FHSG++ H E
Sbjct: 1 MWVPTLSSSSCSSDERDESSGEAALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLE 60
Query: 441 WAYGGHPYAFTGVFEISPQ 497
+ YG H Y +GV+E+ P+
Sbjct: 61 YCYGAHEYPTSGVYEVEPR 79
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 520 FRFRQSVHIGYTDFSEEEVRRLVAELG-KHSE*QIPFNDNNCNHFTSAFCM 669
F FR+SV +G T S + R + +L K+ NCNHFT C+
Sbjct: 84 FIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCL 134
>At4g31980.1 68417.m04547 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 680
Score = 62.5 bits (145), Expect = 2e-10
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 330 GQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPQ 497
G V LNVYD+ N Y G+G++HSG++VHG E+ YG H + +G+FE+ P+
Sbjct: 15 GTVPVYLNVYDLTPMNVYGYWLGIGIYHSGLEVHGVEYGYGAHEKSSSGIFEVEPK 70
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 520 FRFRQSVHIGYTDFSEEEVRRLVAELG-KHSE*QIPFNDNNCNHF 651
F FR+S+ +G T+ +EVR + +L ++ + NCNHF
Sbjct: 75 FTFRKSILVGETEMKAKEVRSFMEKLSEEYQGNKYHLITRNCNHF 119
>At4g25680.1 68417.m03697 expressed protein
Length = 252
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +3
Query: 378 WYTAGAGLG-VFHSGVQVHGS-EWAYGGHPYAFTGVF 482
++ G GLG +FHS +QV+G+ EW+Y G+ TGVF
Sbjct: 29 FFKDGIGLGGIFHSAIQVYGNDEWSY-GYCELGTGVF 64
>At4g25660.1 68417.m03695 expressed protein
Length = 255
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +3
Query: 378 WYTAGAGLG-VFHSGVQVHGS-EWAYGGHPYAFTGVF 482
++ G GLG +FHS +QV+G+ EW+Y G+ TGVF
Sbjct: 29 FFKDGIGLGGIFHSAIQVYGNDEWSY-GYCEQGTGVF 64
>At4g08370.1 68417.m01382 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 350
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 454 PPYAHSDP*T*TPLWNTPRPAPAVYQFVQYIS 359
PP+ +S P T ++N+P P P VY+ V I+
Sbjct: 99 PPFVYSSPPPPTYIYNSPPPPPYVYKSVPRIT 130
>At5g19350.1 68418.m02306 RNA-binding protein 45 (RBP45), putative
Length = 425
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 327 PGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPY 464
PGQ V W +Y G G + G S +AYGG+ Y
Sbjct: 310 PGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGY 355
>At4g33890.2 68417.m04809 expressed protein
Length = 342
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 199 VFFVNMRKKINVTIKPKNS-AVFAPCSRLACRCYRAVQTPSTLGPDRRPWSSTFT 360
V F N K N I+P + + F+P +R CR + PS LGP +P S T T
Sbjct: 91 VRFGNGDSKKNSQIQPLHGDSAFSPSTR-KCRSRKLRDRPSPLGPLGKPHSLTTT 144
>At4g33890.1 68417.m04808 expressed protein
Length = 342
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 199 VFFVNMRKKINVTIKPKNS-AVFAPCSRLACRCYRAVQTPSTLGPDRRPWSSTFT 360
V F N K N I+P + + F+P +R CR + PS LGP +P S T T
Sbjct: 91 VRFGNGDSKKNSQIQPLHGDSAFSPSTR-KCRSRKLRDRPSPLGPLGKPHSLTTT 144
>At2g18770.1 68415.m02185 expressed protein
Length = 260
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 428 NLNTAVEHTQTRARSVPIRPIHIVNVEDHGRL 333
N T V H + + ++P+H+++V H RL
Sbjct: 91 NEGTFVLHNENNTKKGKVKPVHLIDVPGHSRL 122
>At3g23590.1 68416.m02967 expressed protein
Length = 1309
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 318 AGSLNGAIAATCKTGTWRKY 259
A +L+G I+ C+T TWR Y
Sbjct: 1226 ASALDGKISVGCETATWRTY 1245
>At3g07090.1 68416.m00843 expressed protein
Length = 265
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3
Query: 402 GVFHSGVQVHGSEWAYGG 455
GV+H+G+ V+G+E+ +GG
Sbjct: 34 GVWHTGIVVYGNEYFFGG 51
>At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 578
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 269 HVPVLHVAAIAPFRLPAPSARTGDRGPQR 355
HVP+ H +P +P P+ T D PQ+
Sbjct: 89 HVPIRHPRPESPNSMPRPAGETRDGTPQK 117
>At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 571
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 269 HVPVLHVAAIAPFRLPAPSARTGDRGPQR 355
HVP+ H +P +P P+ T D PQ+
Sbjct: 89 HVPIRHPRPESPNSMPRPAGETRDGTPQK 117
>At5g60870.2 68418.m07635 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 383
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 381 YTAGAGLGVFHSGVQVHGSEWAYG 452
+ G G+FHSG+ + G W +G
Sbjct: 33 FRIGISCGLFHSGLTIDGDLWIWG 56
>At5g60870.1 68418.m07636 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 445
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 381 YTAGAGLGVFHSGVQVHGSEWAYG 452
+ G G+FHSG+ + G W +G
Sbjct: 102 FRIGISCGLFHSGLTIDGDLWIWG 125
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 502 FVCGDISKTPVKAYG*PPYAHSDP*T*TP-LWNTPRPAPAVYQFVQYI 362
+ S TP PPY ++ P P ++N+P P P VY+ YI
Sbjct: 22 YTSAQYSPTPTPYSPLPPYVYNSP---PPYVYNSPSPPPYVYKPPPYI 66
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 505 PFVCGDISKTPVKAYG*PPYAHSDP*T*TPLWNTPRPAPAVY 380
P+V S P Y PPY +S P ++++P P P VY
Sbjct: 47 PYVYNSPSPPPY-VYKPPPYIYSSPPPPPYVYSSPPPPPYVY 87
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 454 PPYAHSDP*T*TPLWNTPRPAPAVY 380
PPY +S P ++N+P P P VY
Sbjct: 73 PPYVYSSPPPPPYVYNSPPPPPYVY 97
>At5g39970.1 68418.m04847 expressed protein low similarity to
up-regulated by thyroid hormone in tadpoles; expressed
specifically in the tail and only at metamorphosis;
membrane bound or extracellular protein; C-terminal
basic region [Xenopus laevis] GI:1234787
Length = 690
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 286 CRCYRAVQTPSTLGPDRRPWSSTFTICIGRIGTL 387
C +P + PDR P SS+F+ + IGTL
Sbjct: 643 CSLENTTSSPPSKQPDRSPPSSSFSKKLHNIGTL 676
>At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 754
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 351 NVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYG 452
++YD +W N + G+G+ F G +G+ W+ G
Sbjct: 152 DLYDGFWLNGFRHGSGVYKFADGCLYYGT-WSRG 184
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,969,239
Number of Sequences: 28952
Number of extensions: 317894
Number of successful extensions: 906
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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