Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021382
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 33 0.16
04_04_0379 + 24828928-24829258,24829945-24829996,24830366-24830546 31 0.65
03_06_0138 + 31940606-31940708,31940792-31940897,31941739-319418... 31 1.1
12_02_0579 + 20764626-20765123,20765135-20766064,20767181-207672... 30 1.5
10_05_0019 - 8049145-8049334,8059808-8060618,8060708-8060783,806... 30 1.5
05_03_0362 - 12973488-12974251,12975346-12975580,12976410-129767... 29 2.6
09_04_0375 - 17055024-17055956,17056045-17056296 29 3.5
06_03_1395 + 29851763-29852610,29854080-29854251 29 3.5
03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178 29 3.5
03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098 29 3.5
04_03_0995 + 21521877-21521977,21522152-21522217,21523630-215236... 29 4.6
09_03_0141 + 12704611-12704987,12707391-12707760 28 6.0
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 28 6.0
04_01_0160 + 1830671-1830779,1830898-1830971,1831374-1831671,183... 28 6.0
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 28 6.0
11_01_0600 - 4780579-4780839,4781256-4781324,4781535-4781598,478... 28 8.0
07_01_0116 - 855122-855352,856733-857059,857095-858481,858636-85... 28 8.0
02_05_0258 + 27222058-27223198,27223297-27223460,27224399-272245... 28 8.0
01_06_1097 + 34507376-34507395,34509380-34511214,34511263-345115... 28 8.0
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 TEPEELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNAD-AEDEMDIDETASGAMNE 437
TE E+ G S + +DVE + +EE + + D ED+ D + +GA E
Sbjct: 58 TEAEDAKEEGASESEGEAMDVEAKESADEKEEEEAEAEADGDEGEDKSDEMDAEAGAAEE 117
Query: 438 ES 443
E+
Sbjct: 118 EA 119
>04_04_0379 + 24828928-24829258,24829945-24829996,24830366-24830546
Length = 187
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 124 MESDPATHSDSHDG-AEVSPQADNQDNQV--ADTIDDLPDNNSASDE 255
+E+DP THS+ + E D +D++ A+ +D DNN+ SDE
Sbjct: 136 VEADPITHSEEQNNEEEEDSDKDEEDSESDGAEYMDTDDDNNTESDE 182
>03_06_0138 +
31940606-31940708,31940792-31940897,31941739-31941838,
31942913-31942958,31943580-31943689
Length = 154
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 VTTEPEELAANGGPTSSSDVLDVETSIAPPAQEEHPV-VEQGNADAEDEMDIDE 413
V E E AA+ P + D LDV ++ EHP +EQ + +E+ + +DE
Sbjct: 11 VVHERPERAAHPHPADAIDALDVFDTVRDIKDPEHPYSLEQLSVLSEESVSVDE 64
>12_02_0579 +
20764626-20765123,20765135-20766064,20767181-20767275,
20767342-20767384,20767869-20768231
Length = 642
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 288 GGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCL 467
GG S S + + + +APP +EE E A+ E+E+ A+ A++EE + L
Sbjct: 191 GGRPSRSALEEEQAEVAPPVEEEED-EEVSPAEGEEEL---PPAAMAVDEEDVAVAPVVL 246
Query: 468 STPADTEENSP 500
D E P
Sbjct: 247 EEAVDEELELP 257
>10_05_0019 -
8049145-8049334,8059808-8060618,8060708-8060783,
8060856-8061008
Length = 409
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 AQEEHPVVEQ-GNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDKT 515
A +E V E+ GN + E+E E A + + + + +NC+ TP T SP +++T
Sbjct: 160 ADDEDDVKERDGNEEGEEE----EKAEAVVEKAADEVVENCVDTPGYTPTPSPGHNET 213
>05_03_0362 -
12973488-12974251,12975346-12975580,12976410-12976738,
12977277-12977404,12977695-12977879,12977972-12978165,
12978239-12978368,12978507-12978566,12979037-12979059,
12979158-12979218,12979677-12979748,12979804-12979924,
12980351-12980415,12980973-12981089,12981970-12982239
Length = 917
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 258 TTEPEELAANGGPTSSSDVLDVETSIAPPAQEE--HPVVEQGNADAEDEM 401
TTE L A P+SS+D L ++ P ++ PV ++G+ D D +
Sbjct: 810 TTETVNLKATDNPSSSNDGLTQVRTLLPDLNQQVAAPVSDEGHTDIVDHL 859
>09_04_0375 - 17055024-17055956,17056045-17056296
Length = 394
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 285 NGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADA 389
+GG T+SS L + +PP Q++H E+ +A
Sbjct: 281 SGGSTTSSSSLTIAEEPSPPPQQQHLAGEKSGGEA 315
>06_03_1395 + 29851763-29852610,29854080-29854251
Length = 339
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 282 ANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAED 395
+ GG ++S + LD ETS EH +G+ D ED
Sbjct: 110 SKGGESASCEGLDDETSADSSRVAEHGDANEGDVDVED 147
>03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178
Length = 1122
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 143 LTAILTMARKCR-LKPITRITRLPILSMICLTIIQQVTSD 259
L I+ + C+ L P+ + RL ILSM C+T ++ V +
Sbjct: 819 LAKIILCQQSCKFLPPLGELPRLRILSMECMTDVEHVRQE 858
>03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098
Length = 221
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +3
Query: 255 VTTEPEELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMN 434
V T EL ++ P D E + +++ PVVE D +DE D D+ +
Sbjct: 9 VATAEAELESSAAPPVKPD----EAAAKAQPEDDAPVVEDAKDDDDDEEDDDDDEDEDED 64
Query: 435 EESAYIGD 458
E IG+
Sbjct: 65 GEQGAIGN 72
>04_03_0995 +
21521877-21521977,21522152-21522217,21523630-21523696,
21523959-21524041,21524318-21524359,21524614-21524733,
21524806-21524869,21525028-21525113,21525217-21525299,
21525994-21526070,21526549-21526567,21526568-21526661,
21527042-21527087
Length = 315
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -1
Query: 509 VILGRILFSICRCRKTIISDIR*FLVHST*SSFIYVHFIFSICITLFNYRMLFLSRRCNR 330
+ LGRI FS T+ +R + ++ + + + FSIC L++Y + +CN
Sbjct: 52 IFLGRISFSGIMVLSTLHLQLR--VEYTLYYNIWFRSYPFSICGMLWDYELKHKIFQCNY 109
Query: 329 SLY 321
SLY
Sbjct: 110 SLY 112
>09_03_0141 + 12704611-12704987,12707391-12707760
Length = 248
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 343 GGAIEVSTSKTSLLLVGPPFAASSSGSVVTRHLLNYCQANH 221
GGA++ S+S+ GP A+SSS TR L+ C+ H
Sbjct: 54 GGAVKPSSSRR-----GPAAASSSSSETETRALIQSCRLLH 89
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +3
Query: 261 TEPEELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAM--- 431
+E E+L+ + + +VE QEE E+G + E+E +++ A G
Sbjct: 15 SEEEQLSPSSSAGEEEEE-EVEEEEGEEQQEEQGEEEEGFSGDEEEQEVEGEADGEQVEE 73
Query: 432 -NEESAYIGDNCLSTPADTEENSPQNDK 512
EE + +G+ + EE + ++
Sbjct: 74 EEEEESSVGEEEAEAEGEEEEEEVEEEQ 101
>04_01_0160 +
1830671-1830779,1830898-1830971,1831374-1831671,
1831900-1832867,1833504-1833716,1834034-1834237,
1835063-1835104
Length = 635
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 339 PPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNC 464
PP++ H + N D+++EM + SG ++S + C
Sbjct: 66 PPSESNHAISHGSNTDSKEEM---SSGSGYRRQQSCFSSSTC 104
>02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 TEPE---ELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAM 431
T+PE +L A+ +SS + V + AP ++ +DE D E A M
Sbjct: 1448 TQPEKKRDLVASDVSSSSQSLTTVTEANAPNEVASMVTEANDSSSNDDERDAGEDAQEQM 1507
Query: 432 NEESAYIGDNCLSTPADTEENSPQNDK 512
+ G+N S+P+++E+N K
Sbjct: 1508 SSG----GENEKSSPSESEKNDSPGAK 1530
>11_01_0600 -
4780579-4780839,4781256-4781324,4781535-4781598,
4781791-4781919,4782234-4782541
Length = 276
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 536 KEPESEEAEGLGDAEESPDQSISSAILPTD---SGVGEVXWSXQRSR*WNQVP 685
++P A +P S SSA+LP S + EV W +RSR W+ +P
Sbjct: 217 RQPRPSRRSSAAAAASAPPASASSALLPWGPALSHLREVDW--ERSR-WDSIP 266
>07_01_0116 -
855122-855352,856733-857059,857095-858481,858636-858895
Length = 734
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = +3
Query: 342 PAQEEHP----VVEQGNADAEDEMDIDETASGAMNEESAYIGD 458
P QE HP VVE N D E +DE + E +GD
Sbjct: 649 PKQEHHPGSSEVVELSNWDMEFRRHLDEHRQNDLGELKGLVGD 691
>02_05_0258 +
27222058-27223198,27223297-27223460,27224399-27224575,
27224713-27224761,27224991-27225793
Length = 777
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 255 VTTEPEELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQG 377
V++E + G + S + V +SIA +EE+PVV++G
Sbjct: 270 VSSEYSAHGSGGARSRRSSIGGVSSSIAEVDEEENPVVDKG 310
>01_06_1097 +
34507376-34507395,34509380-34511214,34511263-34511598,
34511800-34513691
Length = 1360
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 139 ATHSDS--HDGAEVSPQADNQDNQVADTIDDLPDNNSASD 252
+TH D+ D ++ +QD+Q D +D DNN A +
Sbjct: 383 STHPDTIPKDDSDTDSHVSSQDHQTDDDSNDETDNNDAKE 422
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,013,138
Number of Sequences: 37544
Number of extensions: 295672
Number of successful extensions: 1112
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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