Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021382
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK123600-1|BAC85657.1| 1035|Homo sapiens mRNA. protein. 33 1.3
AK123044-1|BAC85523.1| 548|Homo sapiens PTIP mRNA. protein. 33 1.3
DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant pro... 31 2.9
AL139423-2|CAI22570.1| 706|Homo sapiens castor zinc finger 1 pr... 31 2.9
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 31 2.9
AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 31 2.9
BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor, argini... 31 5.1
AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein. 31 5.1
AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of white-apr... 31 5.1
AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white apr... 31 5.1
>AK123600-1|BAC85657.1| 1035|Homo sapiens mRNA. protein.
Length = 1035
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 348 QEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEEN 494
+EE VE D+++E DE +S A ++E + GD S ++TE++
Sbjct: 161 EEEEEEVENEEQDSQNEGSTDEKSSPASSQEGSPSGDQQFSPKSNTEKS 209
>AK123044-1|BAC85523.1| 548|Homo sapiens PTIP mRNA. protein.
Length = 548
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 348 QEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEEN 494
+EE VE D+++E DE +S A ++E + GD S ++TE++
Sbjct: 104 EEEEEEVENEEQDSQNEGSTDEKSSPASSQEGSPSGDQQFSPKSNTEKS 152
>DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant protein.
Length = 1759
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 339 PPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQN 506
PP+Q +++ A+ ++ MD + GAM+ ES+ + +C STP E + N
Sbjct: 1337 PPSQGPPGLMD---AETDECMDYTGCSPGAMSSESSTMDRSCSSTPVGNESTAAGN 1389
>AL139423-2|CAI22570.1| 706|Homo sapiens castor zinc finger 1
protein.
Length = 706
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 339 PPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQN 506
PP+Q +++ A+ ++ MD + GAM+ ES+ + +C STP E + N
Sbjct: 284 PPSQGPPGLMD---AETDECMDYTGCSPGAMSSESSTMDRSCSSTPVGNESTAAGN 336
>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
precursor protein.
Length = 1253
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 130 SDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASD 252
SD + SDS D ++ S +D+ D+ + D D+N +SD
Sbjct: 1148 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSD 1188
>AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein.
Length = 788
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 130 SDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASD 252
SD + SDS D ++ S +D+ D+ + D D+N +SD
Sbjct: 683 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSD 723
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 127 ESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASD 252
+SD + SDS D + S +D+ D+ + D D++++SD
Sbjct: 263 DSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSD 304
>BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor,
arginine/serine-rich 16 protein.
Length = 659
Score = 30.7 bits (66), Expect = 5.1
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 270 EELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEM--DID-ETASGAMNEE 440
E+ A+ G S V +VE + P +EE E+ N+D EDE+ DID E +N+E
Sbjct: 143 EKKASIGYTYEDSTVAEVEKAAEKPEEEESAAEEESNSD-EDEVIPDIDVEVDVDELNQE 201
>AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein.
Length = 594
Score = 30.7 bits (66), Expect = 5.1
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 270 EELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEM--DID-ETASGAMNEE 440
E+ A+ G S V +VE + P +EE E+ N+D EDE+ DID E +N+E
Sbjct: 158 EKKASIGYTYEDSTVAEVEKAAEKPEEEESAAEEESNSD-EDEVIPDIDVEVDVDELNQE 216
>AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of
white-apricot homolog 2 protein.
Length = 659
Score = 30.7 bits (66), Expect = 5.1
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 270 EELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEM--DID-ETASGAMNEE 440
E+ A+ G S V +VE + P +EE E+ N+D EDE+ DID E +N+E
Sbjct: 143 EKKASIGYTYEDSTVAEVEKAAEKPEEEESAAEEESNSD-EDEVIPDIDVEVDVDELNQE 201
>AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white
apricot homolog 2 protein.
Length = 659
Score = 30.7 bits (66), Expect = 5.1
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 270 EELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEM--DID-ETASGAMNEE 440
E+ A+ G S V +VE + P +EE E+ N+D EDE+ DID E +N+E
Sbjct: 143 EKKASIGYTYEDSTVAEVEKAAEKPEEEESAAEEESNSD-EDEVIPDIDVEVDVDELNQE 201
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,903,379
Number of Sequences: 237096
Number of extensions: 1611455
Number of successful extensions: 4703
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4689
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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