SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021382
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-10|CAB82002.1|  286|Caenorhabditis elegans Hypothetical...    32   0.44 
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    30   1.3  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    30   1.3  
AC024882-18|AAF60938.1|  392|Caenorhabditis elegans Hypothetical...    30   1.3  
AF164113-1|AAD45535.1|  810|Caenorhabditis elegans zinc finger p...    30   1.8  
U00052-3|AAK21426.1|  308|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL110477-20|CAB76740.3|  728|Caenorhabditis elegans Hypothetical...    29   4.1  
AF016427-8|AAB65355.1|  513|Caenorhabditis elegans Hypothetical ...    29   4.1  
AF016674-4|AAB66130.1|  287|Caenorhabditis elegans Hypothetical ...    28   7.2  
AC024138-1|AAU05565.1|  319|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p...    27   9.5  
U80454-6|AAB37879.1|  786|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    27   9.5  
U56966-3|AAU05584.1|  332|Caenorhabditis elegans Ace(angiotensin...    27   9.5  
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical...    27   9.5  
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ...    27   9.5  
AC024847-10|AAF60859.1|  393|Caenorhabditis elegans Ground-like ...    27   9.5  

>AL132902-10|CAB82002.1|  286|Caenorhabditis elegans Hypothetical
           protein Y71A12B.11 protein.
          Length = 286

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +3

Query: 300 SSSDVLDVETSIAPPAQEEHPVVE-QGNADAEDEMDIDETASGAMN--EESAYIGDNCLS 470
           S  + LD   S A    E     E +G+ D+EDE  ++ET + A+N  E  +   D  + 
Sbjct: 156 SKPEALDDSESEASDVSESKDESESEGSDDSEDEEYVEETCTDALNQLEPESDAADESVE 215

Query: 471 TPADTEENSPQND 509
              + +E+S  +D
Sbjct: 216 EEEEEDEDSDDSD 228



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 509 QDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEV 643
           +D   D      +SEE E  G   ++P +  +S+   TD  +GE+
Sbjct: 220 EDEDSDDSDDSDDSEEEEAEGSTAQAPAEKANSSTTTTDQNIGEL 264


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 264 EP-EELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEE 440
           EP E++     PTSS+D   V        +EE P++++  +D  + MDI  + SG  ++ 
Sbjct: 168 EPIEDIVEPNEPTSSADP-PVSNIKDEDIKEEEPLIKKPASDESESMDIANSESGNDSDS 226

Query: 441 S 443
           S
Sbjct: 227 S 227


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 264 EP-EELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEE 440
           EP E++     PTSS+D   V        +EE P++++  +D  + MDI  + SG  ++ 
Sbjct: 182 EPIEDIVEPNEPTSSADP-PVSNIKDEDIKEEEPLIKKPASDESESMDIANSESGNDSDS 240

Query: 441 S 443
           S
Sbjct: 241 S 241


>AC024882-18|AAF60938.1|  392|Caenorhabditis elegans Hypothetical
           protein Y9C9A.16 protein.
          Length = 392

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +3

Query: 270 EELAANGGPTSSSDVLDVET-SIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESA 446
           E L  +  PT  ++ ++     I+PP     P+     AD    MD+D     + N  + 
Sbjct: 272 ELLGDDSKPTGVTEEIEFSLLHISPPCTAPEPLRSSHFADKTGFMDVDPQTLQSKNYPNV 331

Query: 447 YIGDNCLSTP-ADTEENSPQNDKTIN 521
           +   +C++TP A T  +   + KT++
Sbjct: 332 FGVGDCMNTPNAKTAASVSTHLKTVD 357


>AF164113-1|AAD45535.1|  810|Caenorhabditis elegans zinc finger
           protein STAT-B protein.
          Length = 810

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -1

Query: 410 IYVHFIFSICITLFNYRMLFLSRRCNRSLYVQNIAAASWTTIRSKFLRLSGHSSLAEL-L 234
           IY+ ++F I  +   Y   FLS R NR+L  Q I     TT  +  +  +   SLA   +
Sbjct: 11  IYLWYLFFIPFSNSYYFSSFLSNRINRNLLFQFIVVMGETTSINSAISSNSSLSLASTQV 70

Query: 233 SGKSSIVSATWL 198
                 V   WL
Sbjct: 71  QSPEKPVRPAWL 82


>U00052-3|AAK21426.1|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.4 protein.
          Length = 308

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +3

Query: 339 PPAQEEHPVVEQGNADAE---DEMDIDETASGAMNEESAYIGDNCLSTPADTEENSP 500
           PP  E  P     ++ A    D +D+D   S  +    AYI D+ +++P++    SP
Sbjct: 139 PPVPEAFPPAANSSSAASPDADFLDLDSLMSCDITSLDAYIHDDSIASPSNASHISP 195


>AL110477-20|CAB76740.3|  728|Caenorhabditis elegans Hypothetical
           protein Y113G7B.18 protein.
          Length = 728

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 369 EQGNADAEDEMDIDETASGAMNEE 440
           E    D EDE+D +  A G +NEE
Sbjct: 80  ENSKVDPEDELDDENVAKGGLNEE 103


>AF016427-8|AAB65355.1|  513|Caenorhabditis elegans Hypothetical
           protein F32D1.9 protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = +3

Query: 318 DVETSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENS 497
           D E ++AP    E+P V Q + D   E D+ +    A N E+    +N L       ENS
Sbjct: 16  DEEHAVAPVEDSENPDVIQLDDDVIPEEDVPDDEETAENLENL---ENVLDDSEIIAENS 72

Query: 498 PQNDKTI 518
            + D+ +
Sbjct: 73  GEADQEV 79


>AF016674-4|AAB66130.1|  287|Caenorhabditis elegans Hypothetical
           protein C03H5.3 protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +3

Query: 270 EELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAED-EMDIDETASGAMNEESA 446
           E LA N G  SS+++ +    I  P+QE        + DAE  ++ +D  A  +  E+  
Sbjct: 57  ERLAKNSGENSSAEIAEEHKEIVAPSQE-----NSVDDDAESTQLSVDVFADPSDFEDD- 110

Query: 447 YIGDNCLSTPADTEENS--PQNDK 512
              D+ +    D E+N+  P+ND+
Sbjct: 111 ---DDEVVPETDYEDNNEEPKNDQ 131


>AC024138-1|AAU05565.1|  319|Caenorhabditis elegans Hypothetical
           protein H08J11.2 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/75 (25%), Positives = 35/75 (46%)
 Frame = +3

Query: 264 EPEELAANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEES 443
           +PEE+    G + +++ ++V  S   PA++++ V E   A    E + D+ A      +S
Sbjct: 167 KPEEIIDATGTSDTAEKIEVVISKEEPAEQKNEVEEPDYAQVPAESE-DDAAQELAPTDS 225

Query: 444 AYIGDNCLSTPADTE 488
           A    + L  P   E
Sbjct: 226 AIQVVHVLEAPQKAE 240


>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
            W04A8.7 protein.
          Length = 1792

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
 Frame = +3

Query: 273  ELAANGGPTSSSDVLDVETSIAPPAQ------EEHPVVEQGNAD----AEDEMDIDETAS 422
            EL  N  P++ +D    +  +A  +       E+HP  E+   D     +D+MDID T  
Sbjct: 1688 ELERNINPSAINDAAAAQRGLAMDSDDHMDEMEDHPTEEEEEDDDDEIMDDDMDIDATGY 1747

Query: 423  GAMNEESAYIGD--NCLSTPADTEENSPQND 509
               ++++  +G   N L+  +D++E+    D
Sbjct: 1748 SYDHDDNVAVGQIFNDLAM-SDSDEDERAED 1777


>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
           protein T05F1.6 protein.
          Length = 1165

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 279 AANGGPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEMDID 410
           ++N G    S+  D++T   PPA++E PV+   N   ED++ +D
Sbjct: 685 SSNRGRKRKSEASDIKT---PPAKKE-PVIPLKNLSDEDQLLVD 724


>U80454-6|AAB37879.1|  786|Caenorhabditis elegans Hypothetical
           protein T16A1.2 protein.
          Length = 786

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 181 QADNQDNQVADTIDDLPDNNSA 246
           Q  N  N + D IDD+ DNNS+
Sbjct: 398 QVINNKNGILDKIDDISDNNSS 419


>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           a protein.
          Length = 906

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 342 PAQEEHPVVEQGNADAEDEMDIDETASGAMNEE 440
           P  E  P ++  N ++ED  D+ ETA+    +E
Sbjct: 87  PTPEPEPAIKFDNIESEDYGDVAETAASTQPDE 119


>U56966-3|AAU05584.1|  332|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           b protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 342 PAQEEHPVVEQGNADAEDEMDIDETASGAMNEE 440
           P  E  P ++  N ++ED  D+ ETA+    +E
Sbjct: 87  PTPEPEPAIKFDNIESEDYGDVAETAASTQPDE 119


>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
            protein W04A8.7 protein.
          Length = 1792

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
 Frame = +3

Query: 273  ELAANGGPTSSSDVLDVETSIAPPAQ------EEHPVVEQGNAD----AEDEMDIDETAS 422
            EL  N  P++ +D    +  +A  +       E+HP  E+   D     +D+MDID T  
Sbjct: 1688 ELERNINPSAINDAAAAQRGLAMDSDDHMDEMEDHPTEEEEEDDDDEIMDDDMDIDATGY 1747

Query: 423  GAMNEESAYIGD--NCLSTPADTEENSPQND 509
               ++++  +G   N L+  +D++E+    D
Sbjct: 1748 SYDHDDNVAVGQIFNDLAM-SDSDEDERAED 1777


>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y113G7B.12 protein.
          Length = 1042

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 133 DPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASD 252
           + + + D  D  E S   +  DN+ A    +  DN  ASD
Sbjct: 274 EASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEASD 313


>AC024847-10|AAF60859.1|  393|Caenorhabditis elegans Ground-like
           (grd related) protein16, isoform a protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = +3

Query: 291 GPTSSSDVLDVETSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLS 470
           GP SS  V  V       A  EH  V++  A+ E  + + ET + A+ E  A +      
Sbjct: 192 GPVSSIQVTQVSQGGNYQAPPEHQAVQEIVAETEAPVVVAETEAPAVVETEAPVVIEETE 251

Query: 471 TPADTEE 491
            P   EE
Sbjct: 252 APVVVEE 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,852,949
Number of Sequences: 27780
Number of extensions: 265012
Number of successful extensions: 1090
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -