Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021381
(699 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 46 4e-07
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 23 3.2
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 3.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 3.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 3.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 9.7
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 45.6 bits (103), Expect = 4e-07
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = +1
Query: 514 QTGSGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTS 681
QTGSGKT A++LP I ++ + PP + P+ ++++PTRELA QI F + S
Sbjct: 203 QTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNS 262
Query: 682 YV 687
V
Sbjct: 263 TV 264
Score = 37.5 bits (83), Expect = 1e-04
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
PI FE + ++ + VK GY +PT IQ P+ +SG++L+
Sbjct: 156 PITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLM 199
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
LL +MK+N LG AC + I
Sbjct: 173 LLVDYMKKNKTLGAACGRIHPI 194
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
LL +MK+N LG AC + I
Sbjct: 487 LLVDYMKKNKTLGAACGRIHPI 508
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
LL +MK+N LG AC + I
Sbjct: 720 LLVDYMKKNKTLGAACGRIHPI 741
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
LL +MK+N LG AC + I
Sbjct: 720 LLVDYMKKNKTLGAACGRIHPI 741
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
LL MK+N NLG AC + +
Sbjct: 747 LLIDLMKKNRNLGAACGRIHPV 768
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
LL MK+N NLG AC + +
Sbjct: 747 LLIDLMKKNRNLGAACGRIHPV 768
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
LL MK+N NLG AC + +
Sbjct: 747 LLIDLMKKNRNLGAACGRIHPV 768
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
LL MK+N NLG AC + +
Sbjct: 747 LLIDLMKKNRNLGAACGRIHPV 768
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 565 CAQWLARCRPTFCRNPFEYPTKFF 494
CA + C FCR +PT F+
Sbjct: 290 CALIILLCIYYFCRAFIIFPTHFY 313
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,422
Number of Sequences: 336
Number of extensions: 3242
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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