Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021381
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    47   7e-07
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   0.99 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   1.7  
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    24   5.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.0  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   9.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 46.8 bits (106), Expect = 7e-07
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
 Frame = +1

Query: 514 QTGSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGH 675
           QTGSGKT A++LP I H ++ +  +  R   P  +++APTRELA QI      F H
Sbjct: 219 QTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAH 274



 Score = 35.1 bits (77), Expect = 0.002
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 378 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
           ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+
Sbjct: 173 VESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 97  TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 216
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
 Frame = -1

Query: 273  FLLKGWMKQNPNL---GDACSDLQRILF----SHQILQILQIYCH 160
            F+ KG ++ +PN    GDA  D++ +LF    S +I   +Q  CH
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = +3

Query: 450 PTPIQAQGWPIAMSGKNLVGYSNGFRQNVGLHLASHCAHKQPTAYSER 593
           P P +  GW ++ SG ++  +++  ++       S CA   P+    R
Sbjct: 49  PPPCRVPGWRLSTSGASIRMHASARKRAYCPRTRSACAETFPSTRRRR 96


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 270 LLKGWMKQNPNLGDACSDLQRI 205
           LL G MK +P+LG AC  +  +
Sbjct: 406 LLVGRMKVDPDLGAACGRIHPV 427


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 151 LATVAVDLEDLEDLVGKKNSLEVRTCVAQIGIL 249
           L  +A+D+  L+  +GKK +L V   +  +G +
Sbjct: 176 LMAIAIDMNPLKPRMGKKATLCVAASIWIVGTI 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,622
Number of Sequences: 2352
Number of extensions: 12333
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)