Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021372
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    26   0.70 
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   8.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   8.6  

>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -2

Query: 316 SIFRKISLIIKVSVSQHHEPYRATA*QRKQSGL*TFFRILTHFTE 182
           S+F K  L I  S+ +   P+R    +R++SG  TF  ++   T+
Sbjct: 502 SLFFKAYLAIAQSLDKQSIPHRTPVGEREKSGANTFHTLVPKSTQ 546


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 231 SKAACEPSLESSPILPNRTLXLTKAPFFKFIFKICNKLIAKC 106
           S+  CE   E+  IL N    L   P      KIC++  A+C
Sbjct: 362 SRNNCELECEAKLILENCGCVLYYLPKLYEDTKICSRANARC 403


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 231 SKAACEPSLESSPILPNRTLXLTKAPFFKFIFKICNKLIAKC 106
           S+  CE   E+  IL N    L   P      KIC++  A+C
Sbjct: 362 SRNNCELECEAKLILENCGCVLYYLPKLYEDTKICSRANARC 403


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,010
Number of Sequences: 2352
Number of extensions: 9006
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)