Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021372
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004129-1|AAH04129.1| 621|Homo sapiens glycosylphosphatidylino... 48 3e-05
BC003171-1|AAH03171.1| 621|Homo sapiens glycosylphosphatidylino... 48 3e-05
AB006969-1|BAA24035.1| 621|Homo sapiens hGAA1 protein. 48 3e-05
AB002137-1|BAA82590.1| 621|Homo sapiens glycosylphosphatidylino... 48 3e-05
AB002135-1|BAA82588.1| 621|Homo sapiens glycosylphosphatidylino... 48 3e-05
AK125859-1|BAC86324.1| 147|Homo sapiens protein ( Homo sapiens ... 31 2.6
BC006383-1|AAH06383.2| 561|Homo sapiens GPAA1 protein protein. 31 3.4
>BC004129-1|AAH04129.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment protein 1
homolog (yeast) protein.
Length = 621
Score = 47.6 bits (108), Expect = 3e-05
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +2
Query: 257 WFVMLANRDFNNETYFSENALLPGLVTNEFNGEYAAKQYLTXFEQELEEKYYDTEKIPVP 436
WF+ L TY SENA+ +V +F G A+ + F ++ + +PV
Sbjct: 35 WFLALVFPPLTQRTYMSENAMGSTMVEEQFAGGDRARAFARDFAAHRKK----SGALPVA 90
Query: 437 LLVAKMSQLHLEVYTQLYT-KLPF----RQGQIYKGTNVY 541
L M + LEVYTQ ++ KLPF + + GTNVY
Sbjct: 91 WLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVY 130
>BC003171-1|AAH03171.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment protein 1
homolog (yeast) protein.
Length = 621
Score = 47.6 bits (108), Expect = 3e-05
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +2
Query: 257 WFVMLANRDFNNETYFSENALLPGLVTNEFNGEYAAKQYLTXFEQELEEKYYDTEKIPVP 436
WF+ L TY SENA+ +V +F G A+ + F ++ + +PV
Sbjct: 35 WFLALVFPPLTQRTYMSENAMGSTMVEEQFAGGDRARAFARDFAAHRKK----SGALPVA 90
Query: 437 LLVAKMSQLHLEVYTQLYT-KLPF----RQGQIYKGTNVY 541
L M + LEVYTQ ++ KLPF + + GTNVY
Sbjct: 91 WLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVY 130
>AB006969-1|BAA24035.1| 621|Homo sapiens hGAA1 protein.
Length = 621
Score = 47.6 bits (108), Expect = 3e-05
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +2
Query: 257 WFVMLANRDFNNETYFSENALLPGLVTNEFNGEYAAKQYLTXFEQELEEKYYDTEKIPVP 436
WF+ L TY SENA+ +V +F G A+ + F ++ + +PV
Sbjct: 35 WFLALVFPPLTQRTYMSENAMGSTMVEEQFAGGDRARAFARDFAAHRKK----SGALPVA 90
Query: 437 LLVAKMSQLHLEVYTQLYT-KLPF----RQGQIYKGTNVY 541
L M + LEVYTQ ++ KLPF + + GTNVY
Sbjct: 91 WLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVY 130
>AB002137-1|BAA82590.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
protein.
Length = 621
Score = 47.6 bits (108), Expect = 3e-05
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +2
Query: 257 WFVMLANRDFNNETYFSENALLPGLVTNEFNGEYAAKQYLTXFEQELEEKYYDTEKIPVP 436
WF+ L TY SENA+ +V +F G A+ + F ++ + +PV
Sbjct: 35 WFLALVFPPLTQRTYMSENAMGSTMVEEQFAGGDRARAFARDFAAHRKK----SGALPVA 90
Query: 437 LLVAKMSQLHLEVYTQLYT-KLPF----RQGQIYKGTNVY 541
L M + LEVYTQ ++ KLPF + + GTNVY
Sbjct: 91 WLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVY 130
>AB002135-1|BAA82588.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
protein.
Length = 621
Score = 47.6 bits (108), Expect = 3e-05
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +2
Query: 257 WFVMLANRDFNNETYFSENALLPGLVTNEFNGEYAAKQYLTXFEQELEEKYYDTEKIPVP 436
WF+ L TY SENA+ +V +F G A+ + F ++ + +PV
Sbjct: 35 WFLALVFPPLTQRTYMSENAMGSTMVEEQFAGGDRARAFARDFAAHRKK----SGALPVA 90
Query: 437 LLVAKMSQLHLEVYTQLYT-KLPF----RQGQIYKGTNVY 541
L M + LEVYTQ ++ KLPF + + GTNVY
Sbjct: 91 WLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVY 130
>AK125859-1|BAC86324.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ43871 fis, clone TESTI4008401. ).
Length = 147
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 171 PEYGSVKWVRILKKVHRPLCFLCYAVALYGS*CWLTETLIMRLIFLKML 317
P G + + LK + R LCF+ A + WL L + L+F KM+
Sbjct: 29 PTLGQLHFTAFLKTLPRELCFISLAGTVSHGQPWLQRRLGVLLLFFKMV 77
>BC006383-1|AAH06383.2| 561|Homo sapiens GPAA1 protein protein.
Length = 561
Score = 30.7 bits (66), Expect = 3.4
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 425 IPVPLLVAKMSQLHLEVYTQLYT-KLPF----RQGQIYKGTNVY 541
+PV L M + LEVYTQ ++ KLPF + + GTNVY
Sbjct: 27 LPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVY 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,677,920
Number of Sequences: 237096
Number of extensions: 1334979
Number of successful extensions: 1965
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1960
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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