Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021372
         (542 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047543-1|AAK77275.1|  561|Drosophila melanogaster GH05723p pro...    63   3e-10
AE014298-808|AAF46094.1|  674|Drosophila melanogaster CG3033-PA ...    63   3e-10

>AY047543-1|AAK77275.1|  561|Drosophila melanogaster GH05723p
           protein.
          Length = 561

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
 Frame = +2

Query: 257 WFVMLANRDFNNETYFSENALLPGLVTNEFNGEYAAKQYLTXFEQELEEKYYDTEKIPVP 436
           WF  LA  +FN+ TY SENAL PGLV  E   + A +  +   E+   E+       P  
Sbjct: 37  WFFCLALPEFNHGTYLSENALSPGLVYPEIRID-ANRLAIQLLEELQRERKDHLSTTPHA 95

Query: 437 LLVAKMSQLHLEVYTQLYT-KLPFRQGQIYKGTNVY 541
            + AKM++  LE +T  YT + PF  G+ Y G N+Y
Sbjct: 96  WIAAKMNEFGLETHTHNYTLRYPFGGGKEYHGKNIY 131


>AE014298-808|AAF46094.1|  674|Drosophila melanogaster CG3033-PA
           protein.
          Length = 674

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
 Frame = +2

Query: 257 WFVMLANRDFNNETYFSENALLPGLVTNEFNGEYAAKQYLTXFEQELEEKYYDTEKIPVP 436
           WF  LA  +FN+ TY SENAL PGLV  E   + A +  +   E+   E+       P  
Sbjct: 37  WFFCLALPEFNHGTYLSENALSPGLVYPEIRID-ANRLAIQLLEELQRERKDHLSTTPHA 95

Query: 437 LLVAKMSQLHLEVYTQLYT-KLPFRQGQIYKGTNVY 541
            + AKM++  LE +T  YT + PF  G+ Y G N+Y
Sbjct: 96  WIAAKMNEFGLETHTHNYTLRYPFGGGKEYHGKNIY 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,879,742
Number of Sequences: 53049
Number of extensions: 417732
Number of successful extensions: 782
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)