Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021370
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   2.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   2.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   2.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.5  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 428 ALDNWPNDMQTAFKF 472
           ALDNW ND     KF
Sbjct: 298 ALDNWKNDKSLKRKF 312


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 286 EDTSQVLQPXSCVPTQSFVDPIHLKICQYPHGGLXLTNVSMSQMQGQV 143
           E+TS       C     +  P+H+K+       +  T +S +  QG V
Sbjct: 61  EETSLATCNMLCSEPAIWPKPVHIKLTNRESSIIDKTKISFNFSQGPV 108


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 245 WNAGXGLQHLAGVLGTLV 298
           W+A  GLQ + G+ G++V
Sbjct: 243 WHAHTGLQKMDGLYGSVV 260


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 245 WNAGXGLQHLAGVLGTLV 298
           W+A  GLQ + G+ G++V
Sbjct: 243 WHAHTGLQKMDGLYGSVV 260


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -2

Query: 398 LYPG-DGAVIRYTGAESVVPGGGC 330
           LY G DG+VI     E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 177 RMLACLKCRVRLTTILESGGDSRS 106
           R+  C++C      ILE  GD  S
Sbjct: 509 RLFTCMECPNNYPWILEPTGDGFS 532


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 250 RRNXAAALGWCPRN 291
           + + A ALGW P N
Sbjct: 153 KASTAQALGWAPTN 166


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/42 (23%), Positives = 16/42 (38%)
 Frame = +2

Query: 17  FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVV 142
           F  TC I    +CE  +     +D ++    R      KI +
Sbjct: 188 FFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,755
Number of Sequences: 336
Number of extensions: 2147
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)