Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021370
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    32   0.010
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    28   0.16 
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   4.6  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   4.6  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   4.6  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   6.1  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   8.0  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.0  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 0.010
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +2

Query: 92  LLATYD---RESPPDSKIVVNLTLHLRHANIREXESTVRILADLQMNWIDKRLSWN 250
           LL  YD   R S   +   V   + + H  I E +ST+ +   ++ +W D +L+WN
Sbjct: 46  LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWN 101


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +2

Query: 143  NLTLHL-RHANI--REXESTVRILADLQMNWIDKRLSWNAGXGLQHLAGVLGTLVEA*XG 313
            NL  HL R A    R  E+  RI A LQ  W D+R +  A    QH   V    +EA   
Sbjct: 981  NLQQHLLRDAESWSRICEAAKRITASLQQAWDDERAALAAHGNEQHFEEVAD--LEARRA 1038

Query: 314  TAKRGCNHRR 343
              +R  N RR
Sbjct: 1039 EIRRARNDRR 1048


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 245 WNAGXGLQHLAGVLGTLV 298
           W+A  GLQ L G+ G++V
Sbjct: 285 WHAHTGLQKLDGLYGSIV 302


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 245 WNAGXGLQHLAGVLGTLV 298
           W+A  GLQ L G+ G++V
Sbjct: 285 WHAHTGLQKLDGLYGSIV 302


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 405 PSALSRRRSRY*IHGRGERSPRRWLQPRLAV-PXQASTS 292
           P  LS +   Y    RGE++P R+  P LAV P ++ TS
Sbjct: 115 PPKLSPKEDYYRKLYRGEKTPERY-APYLAVRPVESLTS 152


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 343 GTTLSAPVYLITAPSPG 393
           GTT+ +P    T PSPG
Sbjct: 4   GTTMGSPGAASTTPSPG 20


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 106 RSGVSPRLQNRSQPD 150
           RS +SP L   SQPD
Sbjct: 370 RSNLSPMLNEESQPD 384


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 331 QPPPGTTLSAPVYLITAPSPG 393
           +PP    L+ P YL+ +P  G
Sbjct: 519 EPPHAYELNPPAYLLASPVTG 539


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,049
Number of Sequences: 2352
Number of extensions: 10138
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)