Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021369
         (699 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g75210.1 68414.m08737 5' nucleotidase family protein contains...   118   4e-27
At2g23890.1 68415.m02853 5' nucleotidase family protein contains...   102   2e-22
At5g48960.1 68418.m06057 5' nucleotidase family protein low simi...    84   1e-16
At3g26125.1 68416.m03258 cytochrome P450, putative                     28   5.2  
At1g02110.1 68414.m00137 proline-rich family protein contains pr...    28   6.8  
At4g14380.1 68417.m02215 expressed protein                             27   9.0  
At2g44525.1 68415.m05537 expressed protein                             27   9.0  

>At1g75210.1 68414.m08737 5' nucleotidase family protein contains
           Pfam profile: PF05761 5' nucleotidase family
          Length = 642

 Score =  118 bits (284), Expect = 4e-27
 Identities = 62/145 (42%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
 Frame = +1

Query: 253 QIFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVK-GYPREILEFEYD 429
           QIF NRSL+++N+   GFDMDYTLA+YKS  +E+L ++ T  +LV   GYP E+LE+ +D
Sbjct: 148 QIFCNRSLNMKNIIAVGFDMDYTLAQYKSETFESLAYDGTVRKLVYDLGYPNELLEWTFD 207

Query: 430 PSFPVRGLWFDTLYGNLLKVDAYGNI*CVYMGFEFLKHSQVYELYPNKFL--TLDESRVY 603
            ++ VRGL  D   GN+LK+D +  +   Y GF  L      E+Y +  +  + DE    
Sbjct: 208 WNYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVEIYGSSLVRDSFDEPDYA 267

Query: 604 VLNTLFNLPETYLIACLIDFFTIHP 678
           +++TLF+L E YL A L+DF   +P
Sbjct: 268 LIDTLFSLAEAYLFAQLVDFKDNNP 292


>At2g23890.1 68415.m02853 5' nucleotidase family protein contains
           Pfam PF05761: 5' nucleotidase family; similar to
           Cytosolic purine 5'-nucleotidase (EC 3.1.3.5)
           (5'-nucleotidase cytosolic II) (Swiss-Prot:P49902) [Homo
           sapiens]
          Length = 553

 Score =  102 bits (245), Expect = 2e-22
 Identities = 55/141 (39%), Positives = 87/141 (61%), Gaps = 4/141 (2%)
 Frame = +1

Query: 256 IFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVK-GYPREILEFEYDP 432
           I+VN++L L+N++ YGFD DYTLA Y S   ++L ++L K+ +V +  YP    +FEYDP
Sbjct: 99  IYVNKNLRLDNIQVYGFDYDYTLAHYSS-HLQSLIYDLAKKHMVNEFRYPDVCTQFEYDP 157

Query: 433 SFPVRGLWFDTLYGNLLKVDAYGNI--*CVYMGFEFLKHSQVYELYPNKFLTLDESRVYV 606
           +FP+RGL++D L G L+K+D +G+I     Y G   L   ++  +Y  + +  D++R  V
Sbjct: 158 TFPIRGLYYDKLKGCLMKLDFFGSIEPDGCYFGRRKLSRKEIESMYGTRHIGRDQARGLV 217

Query: 607 -LNTLFNLPETYLIACLIDFF 666
            L   F   E  LIA ++ +F
Sbjct: 218 GLMDFFCFSEACLIADMVQYF 238


>At5g48960.1 68418.m06057 5' nucleotidase family protein low
           similarity to SP|P49902 Cytosolic purine 5'-nucleotidase
           (EC 3.1.3.5) (5'-nucleotidase cytosolic II) {Homo
           sapiens}; contains Pfam profile PF05761: 5' nucleotidase
           family
          Length = 642

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
 Frame = +1

Query: 256 IFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVKGYPREILEFEYDPS 435
           IF +R+L+L ++   G+DMDYTL  Y    +E   ++   E L   G+P + L F  DP 
Sbjct: 165 IFCSRTLNLRSISAIGYDMDYTLMHYNVMAWEGKAYDYCMENLKSMGFPVDGLAF--DPE 222

Query: 436 FPVRGLWFDTLYGNLLKVDAYGNI*CVYMGFEFLKHSQVYELYPNKFLTL-DESRVYVLN 612
             +RGL  D   GNL+K D +G +     G + L +  V E+Y  + + L ++SR   LN
Sbjct: 223 LVIRGLMIDKEKGNLVKADRFGYVKRAMHGTKMLSNKAVSEIYGRELVDLRNQSRWEFLN 282

Query: 613 TLFNLPETYLIACLID 660
           T F++ E    A ++D
Sbjct: 283 TFFSVSEALAYAQMVD 298


>At3g26125.1 68416.m03258 cytochrome P450, putative
          Length = 541

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +1

Query: 433 SFPVRGLWFDTLYGNLLKVDAYGNI*CVYMGFEFLKHSQVYELYPNKFLTLDESRVY 603
           +FP +G+WF   YG +  V A  NI   YM     K+    E Y  +F  L E  ++
Sbjct: 79  TFPYQGIWFSGSYGAMTSVPA--NI--EYMLKTNFKNFPKGEFYKERFRDLLEDGIF 131


>At1g02110.1 68414.m00137 proline-rich family protein contains
           proline-rich domain, INTERPRO:IPR000694
          Length = 679

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 130 IVYFQKIYSTSEHALFLLSTVPLAN 56
           I+ FQ+ +  S HA F LS VPL+N
Sbjct: 486 IIKFQREFICSLHAWFKLSLVPLSN 510


>At4g14380.1 68417.m02215 expressed protein
          Length = 200

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +1

Query: 214 KYYVQEILSSC*TQIFVNRSLHLENVKFYGFDMDYT-LAEYKSPQYETLGFNLTKERLVV 390
           KYY     SS     F++RSL     + YG+D +Y+ + +Y+S Q    G + +KE +V 
Sbjct: 69  KYYYSRNQSSRQFLNFISRSLTKPKRRQYGYDDEYSQIYQYQS-QSRGEGTSGSKENVVR 127

Query: 391 KGYPREILEFEYDPSFP 441
           +   ++  E E +   P
Sbjct: 128 RIEEQKEEEEEEEEGMP 144


>At2g44525.1 68415.m05537 expressed protein
          Length = 170

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 565 PNKFLTLDESRVYVLNTLFNLPETYLIACLIDFFTIHPNIRE 690
           P KF  +    + +  T+  +PE  ++ C  D   + P +R+
Sbjct: 87  PRKFSEITTDSLSIFQTVRPIPELLIVGCGRDIHPVTPEVRQ 128


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,734,946
Number of Sequences: 28952
Number of extensions: 301648
Number of successful extensions: 715
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)