Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021366
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 302 NVWHAFQGPKIEPSLIYAEFLKICGQQCTASRDP 201
           N+ H F     +P   + E   + G   TA RDP
Sbjct: 364 NMGHVFISYIHDPDHRHLESFGVMGDSATAMRDP 397


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 437 SKPRETYGVWPPYTNKLGGRSLL 369
           S+P +  G W  +T  +G + LL
Sbjct: 146 SQPMQGVGNWERHTKGIGAKLLL 168


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 136 IDTFNEKVGLKRNFMIGMSFI 74
           +  FNE  G+    M G+SF+
Sbjct: 516 VKLFNETFGIVLLLMFGVSFV 536


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 136 IDTFNEKVGLKRNFMIGMSFI 74
           +  FNE  G+    M G+SF+
Sbjct: 241 VKLFNETFGIVLLLMFGVSFV 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,975
Number of Sequences: 336
Number of extensions: 3761
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)