Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021363
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 8e-23
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 92 3e-19
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 4e-19
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 83 2e-16
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 82 4e-16
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 81 6e-16
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 79 3e-15
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 79 3e-15
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 73 3e-13
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 68 8e-12
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 66 2e-11
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 66 3e-11
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 63 2e-10
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_732| Best HMM Match : AAA (HMM E-Value=0) 61 9e-10
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 55 5e-08
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 40 0.002
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 38 0.006
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 38 0.006
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 31 0.66
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 31 0.66
SB_380| Best HMM Match : AAA (HMM E-Value=0.14) 31 0.87
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 31 1.1
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 30 1.5
SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) 30 1.5
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 30 2.0
SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 29 3.5
SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) 29 3.5
SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_48716| Best HMM Match : Galactosyl_T (HMM E-Value=1.2) 28 6.1
SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23) 28 6.1
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 28 6.1
SB_40213| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.1e-07) 28 6.1
SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 28 6.1
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_19245| Best HMM Match : ADK (HMM E-Value=0) 28 8.1
SB_49278| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_13297| Best HMM Match : RnaseH (HMM E-Value=0.37) 28 8.1
SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 104 bits (249), Expect = 8e-23
Identities = 49/86 (56%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
FF INGPE++S+ GE+E+ LR+ F EA SP+I+FIDELDA+ P+R+K E ERR+V
Sbjct: 318 FFCINGPEVLSRYYGETEARLREIFTEAQNKSPSIVFIDELDALCPRRDKVQNEFERRVV 377
Query: 441 SQLLTLMDGMKKSS---HVIVMAATN 509
+ LLTLMDGM S +V+V+AATN
Sbjct: 378 ATLLTLMDGMHMKSTDTYVMVLAATN 403
Score = 101 bits (243), Expect = 4e-22
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = +1
Query: 10 IHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGI 189
IH G IK++ E A V + IGG + Q+ ++EM+E+PL +P LF A GV PPRGI
Sbjct: 236 IHPFGSVIKKDSE--AKKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGI 293
Query: 190 LMYGPPGTGKTLIARAVANETGLSSF 267
L+YGP GTGKT+IARAVANETG+ F
Sbjct: 294 LLYGPSGTGKTMIARAVANETGVHFF 319
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V + D+GG ++KE VE PL+HP F+ +G++PPRGILMYGPPG KTLIARA+A
Sbjct: 534 VHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIARALAT 593
Query: 247 ETGLS 261
E+GL+
Sbjct: 594 ESGLN 598
Score = 81.0 bits (191), Expect = 8e-16
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHG-EVERRI 437
F I GPE+ SK GESE +R+ F +A +P+I+F DELDAIA +R T G +V R+
Sbjct: 599 FIAIKGPELFSKWVGESEKAVREVFLKARATAPSIVFFDELDAIAGQRNSTGGSDVNDRV 658
Query: 438 VSQLLTLMDGMKKSSHVIVMAATN 509
++QLLT +DG++ VI +AATN
Sbjct: 659 LTQLLTELDGVETLKDVIFIAATN 682
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPERT 589
RP+++DPALRR GRFDREI+IGIP T
Sbjct: 404 RPDALDPALRRPGRFDREIEIGIPSVT 430
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = +1
Query: 19 DGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMY 198
D +P+ + E Y DIGG Q+ +IKE VELPL HP L++ +G+KPP+G+++Y
Sbjct: 361 DADPMVTVMKLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGVILY 420
Query: 199 GPPGTGKTLIARAVANET 252
G PGTGKTL+A+AVAN+T
Sbjct: 421 GQPGTGKTLLAKAVANQT 438
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 92.3 bits (219), Expect = 3e-19
Identities = 37/62 (59%), Positives = 51/62 (82%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V Y DIGGC++Q+ +++E+VE PL HP F +G++PP+G+L++GPPGTGKTL ARAVAN
Sbjct: 81 VTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 140
Query: 247 ET 252
T
Sbjct: 141 RT 142
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR--EKTHGEVE 428
A F + G E++ K GE +R+ FE A I+F DE+DAI R + G+ E
Sbjct: 144 ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIVFFDEIDAIGGARFDDGAGGDNE 203
Query: 429 -RRIVSQLLTLMDGMKKSSHVIVMAATN 509
+R + +L+ +DG ++ V+ ATN
Sbjct: 204 VQRTMLELINQLDGFDPRGNIKVLMATN 231
Score = 37.1 bits (82), Expect = 0.013
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPE 583
RP+++DPAL R GR DR+++ G+P+
Sbjct: 232 RPDTLDPALMRPGRLDRKVEFGLPD 256
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 91.9 bits (218), Expect = 4e-19
Identities = 36/60 (60%), Positives = 52/60 (86%)
Frame = +1
Query: 73 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 252
Y+ +GG KQ+ +IKE++ELP++HP LF+A+G+ P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 176 YEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHT 235
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/74 (31%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +3
Query: 297 LAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK--THGEVE-RRIVSQLLTLMDG 467
+A E+ F ++ +++P+IIF+DE+D+I R + + G+ E +R + +LL +DG
Sbjct: 265 MARHGENLQAMYFVDSREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 324
Query: 468 MKKSSHVIVMAATN 509
+ + ++ V+ ATN
Sbjct: 325 FEATKNIKVIMATN 338
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 85.4 bits (202), Expect = 4e-17
Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Frame = +3
Query: 273 NGPEIMSKLAGESESNLRKAFEEA---DKNSPAIIFIDELDAIAPKREKTHGEVERRIVS 443
NG ++ AGESE NLR+ F +A + P ++FIDELDA+ PKR + E E RIV+
Sbjct: 277 NGTDVFGPHAGESEENLRRVFNKARYASRFGPCVLFIDELDALCPKRGSSGNEEENRIVA 336
Query: 444 QLLTLMDGMKKSSHVIVMAATN 509
QLLTLMDG++ VIV+ ATN
Sbjct: 337 QLLTLMDGLESRGRVIVIGATN 358
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +1
Query: 58 LNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARA 237
L +DD+GG +++ +E PL HP F +G++ PRG+L+YGPPG KT + RA
Sbjct: 478 LQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRA 537
Query: 238 VANET 252
A+ T
Sbjct: 538 AASST 542
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +1
Query: 82 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGL 258
+ G + +KE+V+ PL +P F +G+ P+GIL+ G PG GKTL+ + G+
Sbjct: 213 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGI 271
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIP 580
G RPN++DPALRR GRFDRE+ IG+P
Sbjct: 355 GATNRPNALDPALRRPGRFDREVVIGVP 382
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/76 (31%), Positives = 45/76 (59%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
F ++ ++ S G++E LR+ + P ++F+DELD++A KR G +E R++
Sbjct: 546 FMSLSCAQLFSSYVGDAERTLRELVLQL----PLLLFLDELDSLAGKRGNNLG-METRLL 600
Query: 441 SQLLTLMDGMKKSSHV 488
+ LL MDG+ S+++
Sbjct: 601 ATLLNEMDGVGVSANI 616
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNMKLGDDVDLEQIA 663
P RLEILR+HT+ L DVDL IA
Sbjct: 730 PDMKARLEILRVHTRFSPLAPDVDLSVIA 758
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNMKLGDDVDLEQIA 663
P A RL+ILR H + + L DVDL +A
Sbjct: 382 PSAGQRLDILRAHCKPINLSVDVDLTHLA 410
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 49 EEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLI 228
EE N V Y +IGG Q +I+E VELPL H L+K IG+ PPRG+L+YGPPG GKT++
Sbjct: 156 EEKPN-VSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTML 214
Query: 229 ARAVANET 252
A+AVA+ T
Sbjct: 215 AKAVAHHT 222
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR--EKTHGEVE 428
A F + G E + K GE +R F A +N+PAIIFIDE+DAIA KR +T + E
Sbjct: 224 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADRE 283
Query: 429 -RRIVSQLLTLMDGMKKSSHVIVMAATN 509
+RI+ +LL MDG ++ +V V+ ATN
Sbjct: 284 VQRILLELLNQMDGFDQNVNVKVIMATN 311
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPER 586
R +++DPAL R GR DR+I+ +P+R
Sbjct: 312 RQDTLDPALLRPGRLDRKIEFPLPDR 337
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 82.2 bits (194), Expect = 4e-16
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
F + EI+S ++GESE +R+ F A +P I+F+DE+DAI PKRE ++ERRIV
Sbjct: 738 FLKLAATEIVSGVSGESEEKVRELFTSAVAQAPCILFLDEIDAITPKRENASKDMERRIV 797
Query: 441 SQLLTLMDGMKKS--SHVIVMAATN 509
SQLL+ MD + + +HV+V+ ATN
Sbjct: 798 SQLLSCMDDLNNNPDAHVLVIGATN 822
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
++V + DIGGC L Q+ +++ + + HP +F +GV P G L++GPPG GKTL+A A+
Sbjct: 672 SSVKFADIGGCSNTLEQVGKLL-VHMCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAI 730
Query: 241 ANE 249
A E
Sbjct: 731 AGE 733
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTAASR 601
G RP+S+DPALRR GRFDREI +GIP+ +A +R
Sbjct: 819 GATNRPDSLDPALRRAGRFDREISMGIPDESARAR 853
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 81.4 bits (192), Expect = 6e-16
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V +D +GG KQ+ +KEM+ PL +P +F + PPRG+L +GPPGTGKTL+ARA+AN
Sbjct: 881 VKFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALAN 940
Query: 247 E 249
E
Sbjct: 941 E 941
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R ++ IV
Sbjct: 951 FFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSRQDQIHSSIV 1010
Query: 441 SQLLTLMDGMKKSSHVIVMAATN 509
S LL LMDG+ V+++ ATN
Sbjct: 1011 STLLALMDGLDSRGEVVIIGATN 1033
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G R ++IDPALRR GRFDRE +P+R A
Sbjct: 1030 GATNRIDAIDPALRRPGRFDREFQFALPDRDA 1061
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 79.4 bits (187), Expect = 3e-15
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = +1
Query: 4 TRIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKE 120
T IHC+GEP+KREEEEE+LN VGYDDIGGCRKQLAQIKE
Sbjct: 134 TVIHCEGEPVKREEEEESLNEVGYDDIGGCRKQLAQIKE 172
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +1
Query: 37 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 216
RE E N V +DDIGG +++E+V+ P+ HP F G+ P +G+L YGPPG G
Sbjct: 298 RETVVEVPN-VSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCG 356
Query: 217 KTLIARAVANE 249
KTL+A+A+ANE
Sbjct: 357 KTLLAKAIANE 367
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 RAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE--- 422
+A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA R G+
Sbjct: 369 QANFISIKGPELLTMWFGESEANVRDVFDKARSAAPCVLFFDELDSIAKSRGGNVGDGGG 428
Query: 423 VERRIVSQLLTLMDGMKKSSHVIVMAATN 509
R+++Q+LT MDGM +V ++ ATN
Sbjct: 429 AADRVINQVLTEMDGMNVKKNVFIIGATN 457
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = +3
Query: 405 EKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATN 509
++THGEVERRIVSQLLTLMDG+K+ SHVIVMAATN
Sbjct: 171 KETHGEVERRIVSQLLTLMDGLKQRSHVIVMAATN 205
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNMKLGDDVDLEQIAARV 672
P A GRLEILRIHT+NMKLGDDVDLEQI ++
Sbjct: 229 PDATGRLEILRIHTKNMKLGDDVDLEQIREKM 260
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPERT 589
RPNS+D ALRRFGRFDRE+DIGIP+ T
Sbjct: 206 RPNSVDVALRRFGRFDREVDIGIPDAT 232
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPE 583
G RP+ IDPA+ R GR D+ I I +P+
Sbjct: 454 GATNRPDIIDPAILRPGRLDQLIYIPLPD 482
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKRE-KTHGEVERRI 437
F + GPE+++ GESE +R+ F+ A ++P +IF DELD++ P+R + R+
Sbjct: 45 FISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDELDSLCPRRSGSSESGSSVRV 104
Query: 438 VSQLLTLMDGMKKSSHVIVMAATN 509
V+QLLT MDG++ HV +M ATN
Sbjct: 105 VNQLLTEMDGLQARKHVFIMGATN 128
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +1
Query: 133 PLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGLS 261
P++HP F A+G+ P GIL+ GPPG GKTL+A+A+ANE+G++
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGIN 44
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT--HGEVERR 434
F + GPE+++ G+SE N+R+ F A SP +IF DELD++AP R ++ G V R
Sbjct: 872 FLSVKGPELINMYVGQSEQNVREVFSRAQAASPCVIFFDELDSLAPNRGRSGDSGGVMDR 931
Query: 435 IVSQLLTLMDGMKKSSHVIVMAATN 509
+V+QLL +DG+ + V V+ ATN
Sbjct: 932 VVAQLLAELDGLHSTCDVFVIGATN 956
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/65 (47%), Positives = 45/65 (69%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
+ + D+GG +I + ++LPL HP LF A G++ G+L+YGPPGTGKTL+A+AVA
Sbjct: 809 ISWKDVGGLDSVKEEILDTIQLPLLHPELFAA-GLRRS-GVLLYGPPGTGKTLMAKAVAT 866
Query: 247 ETGLS 261
E L+
Sbjct: 867 ECSLN 871
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPE 583
G RP+ +DPAL R GRFD+ + +G+ E
Sbjct: 953 GATNRPDLLDPALLRPGRFDKLLYLGVSE 981
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
F I GPE++SK G SE +R F A P I+F DE D++AP+R V R+V
Sbjct: 729 FISIKGPELLSKYIGASEQAVRDMFTRAQSAKPCILFFDEFDSLAPRRGHDSTGVTDRVV 788
Query: 441 SQLLTLMDGMKKSSHVIVMAATN 509
+QLLT +DG++ V ++AAT+
Sbjct: 789 NQLLTQLDGVEGLKGVYILAATS 811
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
+G++++GG ++E + P + LF ++ G+L+YGPPGTGKTL+A VA
Sbjct: 664 LGWENVGGLGPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLAGVVAK 723
Query: 247 ETGLS 261
E GL+
Sbjct: 724 ECGLN 728
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPER 586
RP+ IDPAL R GR D+ + IP++
Sbjct: 812 RPDLIDPALLRPGRLDKCVYCPIPDQ 837
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 67.7 bits (158), Expect = 8e-12
Identities = 24/62 (38%), Positives = 42/62 (67%)
Frame = +1
Query: 25 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 204
+P+ E + Y D+GG +Q+ +++E++ELPL +P LF+ +G+ PP+G L++GP
Sbjct: 118 DPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFGP 177
Query: 205 PG 210
PG
Sbjct: 178 PG 179
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 NRAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVE 428
N + F ++ +++SK GESE +++ FE A +N P+IIFIDE+D++ R + E
Sbjct: 190 NNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSIIFIDEVDSLCGSRSENESESA 249
Query: 429 RRIVSQLLTLMDGM-KKSSHVIVMAATN 509
RRI ++ L M G+ + V+V+ ATN
Sbjct: 250 RRIKTEFLVQMQGVGVDNDQVLVLGATN 277
Score = 35.1 bits (77), Expect(2) = 4e-04
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPP-RGILMYG 201
V + DI G +KE V LP++ P LF G + P RGIL+YG
Sbjct: 94 VKWSDIAGLESAKEALKEAVILPIKFPHLF--TGKRTPWRGILLYG 137
Score = 26.2 bits (55), Expect(2) = 4e-04
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 208 GTGKTLIARAVANETGLSSF 267
GTGK+ +A+AVA E S+F
Sbjct: 175 GTGKSYLAKAVATEANNSTF 194
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +1
Query: 58 LNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARA 237
L +DD+GG +++ +E PL HP F +G++ PRG+L+YGPPG KT + RA
Sbjct: 7 LQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRA 66
Query: 238 VANET 252
A+ T
Sbjct: 67 AASST 71
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/76 (36%), Positives = 49/76 (64%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
F ++ ++ S G++E LR+ F +A +PAI+F+DELD++A KR G +E R++
Sbjct: 75 FMSLSCAQLFSSYVGDAERTLRELFLKARATAPAILFLDELDSLAGKRGNNLG-METRLL 133
Query: 441 SQLLTLMDGMKKSSHV 488
+ LL MDG+ S+++
Sbjct: 134 ATLLNEMDGVGVSANI 149
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNMKLGDDVDLEQIA 663
P RLEILR+HT+ L DVDL IA
Sbjct: 263 PDMKARLEILRVHTRFSPLAPDVDLSVIA 291
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +1
Query: 79 DIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGL 258
D+ GC + +I E V L++P + +G K P+G ++ GPPGTGKTL+A+AVA E G+
Sbjct: 49 DVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIPKGAILSGPPGTGKTLLAKAVAGEAGV 107
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK---THGEVER 431
F I+G E + G + +R F +A KN+P IIFIDE+DA+ R + G ER
Sbjct: 109 FLSISGSEFLEMFVGVGPARVRDLFAQARKNAPCIIFIDEIDAVGRARGRGGQFGGHDER 168
Query: 432 -RIVSQLLTLMDGMKKSSHVIVMAATN 509
++QLL MDG S++V+V++ TN
Sbjct: 169 ENTLNQLLVEMDGFSSSTNVVVLSGTN 195
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 500 GHERPNSIDPALRRFGRFDREIDIGIPE 583
G RP+ +DPAL R GRFDR+I + P+
Sbjct: 193 GTNRPDVLDPALLRPGRFDRQIHLPAPD 220
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +1
Query: 133 PLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGLS 261
P++HP F A+G+ P GIL+ GPPG GKTL+A+A+ANE+G++
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGIN 44
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 60.9 bits (141), Expect = 9e-10
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Frame = +3
Query: 267 LINGPEIMSKLAGESESNLRKAFEEA--------DKNSPAIIFIDELDAIAPKR--EKTH 416
+I+GPE+++K GESE+N+RK F EA D ++ +I DE DA+ R T
Sbjct: 213 IISGPEVLNKFVGESEANIRKLFAEAEEEQKRFGDNSALHLIIFDEFDAVCKSRYSYNTG 272
Query: 417 GE-VERRIVSQLLTLMDGMKKSSHVIVMAATNGR 515
G V+ +V+QLL +DG+++ ++V+++ TN R
Sbjct: 273 GTGVQDSVVNQLLAKIDGVEQLNNVLLIGMTNRR 306
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +1
Query: 163 IGVKPPRGILMYGPPGTGKTLIARAV 240
+G+K +GIL++GPPGTGKTL+AR +
Sbjct: 177 MGLKHVKGILLFGPPGTGKTLMARQI 202
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNMK----LGDDVDLEQIAAR 669
P GR++IL+IHT M+ L DDVDL ++A +
Sbjct: 328 PDEEGRVQILKIHTAKMRENKVLADDVDLAELATQ 362
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 60.9 bits (141), Expect = 9e-10
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR-EKTHGEVERRI 437
FF ++ + SK GESE +R FE A +P+ IF+DE+D+I +R + E RR+
Sbjct: 311 FFNVSSSTLTSKYRGESEKLVRILFEMARFYAPSTIFVDEIDSICSRRGSDSEHEASRRV 370
Query: 438 VSQLLTLMDGMKKSS------HVIVMAATN 509
S+LL MDG+ SS V+V+AATN
Sbjct: 371 KSELLVQMDGVGGSSDDGETKQVMVLAATN 400
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +1
Query: 25 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 204
E ++R+ ++ N V + DI + ++E V LPL P F+ I +P RG+LM GP
Sbjct: 234 EALERDILQKNPN-VHWADIADLHEAKKLLEEAVVLPLLMPDYFQGIR-RPWRGVLMVGP 291
Query: 205 PGTGKTLIARAVANETGLSSF 267
PGTGKT++A+AVA E G + F
Sbjct: 292 PGTGKTMLAKAVATECGTTFF 312
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +1
Query: 109 QIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGLSSF 267
+++E+VE LR+P FK +G K P G+L+ G PGTGKTL+A+AVA E G+ F
Sbjct: 142 ELQEVVEF-LRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFF 193
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR-EKTHGEVERRI 437
FF +G E G + +R F A +++P I+F+DELDAI R H
Sbjct: 192 FFFCSGSEFDEMFVGVGAARVRNLFAAAKEHAPCIVFVDELDAIGGSRVVHDHQPYSSMT 251
Query: 438 VSQLL 452
++QLL
Sbjct: 252 LNQLL 256
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT-----HGEV 425
F + G + + AG + +R F A K +P I++IDE+DAI R+ + H E
Sbjct: 186 FLSMAGSDFVEMFAGVGSARVRDLFTRARKLAPCIVYIDEVDAIGRSRKSSRSMGGHNEQ 245
Query: 426 ERRIVSQLLTLMDGMKKSSHVIVMAATN 509
E + +QLL MDGM VI++A+TN
Sbjct: 246 ENTL-NQLLVEMDGMNTLDGVIMLASTN 272
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +1
Query: 73 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE 249
+ D+ G ++ ++ E V+ L+ + +G K P+G L+ GPPGTGKTL+A+AVA E
Sbjct: 124 FKDVAGMQEAKMEVMEFVDY-LKSAGRYTQLGAKIPKGALLVGPPGTGKTLLAKAVATE 181
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 54.8 bits (126), Expect = 6e-08
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 282 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR---EKTHGEVERRIVSQLL 452
+I G+ +R AF A + +PAIIFIDELDAI KR EK +R + +LL
Sbjct: 162 QIQEMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 221
Query: 453 TLMDGMKKSSHVIVMAATN 509
+DG + V+AATN
Sbjct: 222 NQLDGFSSHHDIKVIAATN 240
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPERTAASR 601
R + +DPAL R GR DR+I+ P++ A +R
Sbjct: 241 RVDILDPALLRSGRLDRKIEFPNPDQEARAR 271
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +1
Query: 82 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGL 258
+ G + +KE+V+ PL +P F +G+ P+GIL+ G PG GKTL+ + G+
Sbjct: 43 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGI 101
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 NGPEIMSKLAGESESNLRKAFEEA 344
NG ++ AGESE NLR+ F +A
Sbjct: 107 NGTDVFGPHAGESEENLRRVFNKA 130
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 181 RGILMYGPPGTGKTLIARAVANETGL 258
R +L YGPPGTGKT+ A+++A +G+
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHSGM 355
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +1
Query: 58 LNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARA 237
LN+V D+ G LA +KE + P + G+ RG L+YGPPG GK+ +A
Sbjct: 187 LNSVILDE-GIAEGILADVKEFIG----SPRWYMDRGIPYRRGYLLYGPPGCGKSSFIQA 241
Query: 238 VANETGLS 261
+A E S
Sbjct: 242 LAGELDYS 249
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Frame = +3
Query: 360 AIIFIDELDAIAPKREKTH------GEVERRIV-SQLLTLMDGMKKSSHVIVMAATN 509
+II ++++DA KR++T+ G + R+ S LL +DG+ S +V TN
Sbjct: 276 SIILLEDIDAAFVKRDETNAANKGGGMYQNRVTFSGLLNTLDGVASSEERVVFMTTN 332
>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
Length = 111
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 303 GESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 452
GE E +R F A PA+IF+DE+D++ +R E RRI ++ L
Sbjct: 2 GEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASRRIKTEFL 51
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 187 ILMYGPPGTGKTLIARAVANE 249
+L YGPPGTGKT AVA +
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQ 33
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 178 PRGILMYGPPGTGKTLIARAVANETG 255
PR IL+ G PG GKT + A+A +G
Sbjct: 1617 PRPILLEGSPGVGKTSLVSAIAKASG 1642
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 163 IGVKPPRGILMYGPPGTGKTLIARAVANETGLSS 264
+ V G+L+ GP G+GKT + VA+ G S+
Sbjct: 113 LAVAAGSGVLLEGPVGSGKTCLVEHVASMCGRST 146
>SB_380| Best HMM Match : AAA (HMM E-Value=0.14)
Length = 508
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 175 PPRGILMYGPPGTGKTLIARAVANETGL 258
PP +++ GP G GKTL R +A + GL
Sbjct: 118 PPIRLMIVGPKGAGKTLHGRELARKLGL 145
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 181 RGILMYGPPGTGKTLIARAVANETG 255
R +L+ G PGTGKT IA +A G
Sbjct: 170 RAVLIAGQPGTGKTAIAMGMAQSLG 194
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 136 LRHPSLFKAIGV-KPPRGILMYGPPGTGKTLIARAVA 243
+R+P + A + +PP + + GPP +GKTL+A+ +A
Sbjct: 304 MRNPRPYLAPHLPRPPCKVCVLGPPHSGKTLVAKQLA 340
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 151 LFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGLS 261
LFK+ K + +L+ G PG GKT + + + N LS
Sbjct: 164 LFKSKTKKRMKRVLLEGNPGVGKTTLCKKLVNSWALS 200
>SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)
Length = 1064
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 166 GVKPPRGILMYGPPGTGKTL 225
G P L++GPPGTGKT+
Sbjct: 547 GTSRPHPYLIFGPPGTGKTI 566
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 181 RGILMYGPPGTGKTLIARAVANETGLS 261
+ L+ GPPG GKT A V E G S
Sbjct: 272 KAALLSGPPGVGKTTTATLVCQELGYS 298
>SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +1
Query: 19 DGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMY 198
DG+P++R +++ + ++ E + L + K G+ R I +
Sbjct: 51 DGKPVRRRMKKKKKKKNEEEARTPVYEETIVSNEFIPLCDDEIAKTKGKGLLNARVIFVI 110
Query: 199 GPPGTGKTLIARAVANETG 255
G PG+GKT +A+ +A +G
Sbjct: 111 GGPGSGKTELAKLLAESSG 129
>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1151
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 354 SPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSS---HVIVMAATNGRTPS 524
+PA + ID ++ + K +T E + +S + +L+D S +I+ + N S
Sbjct: 195 TPAFLLIDNVEQLLGKETETEQETQNEFISLIKSLLDSPPAKSGSLKIILTSRANVEEQS 254
Query: 525 TRR 533
RR
Sbjct: 255 LRR 257
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 151 LFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
LFK+ +P + +L+ G PG GKT + + + N
Sbjct: 2463 LFKSKTKQPVKRVLLEGNPGVGKTTLLKKLVN 2494
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 151 LFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGL 258
LFK+ K + +L+ G PG GKT + + + N L
Sbjct: 977 LFKSKTKKRMKRVLLEGNPGVGKTTLCKKLVNSWAL 1012
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 190 LMYGPPGTGKTLIARAVANETG 255
L+ GPPG GKT +A +A G
Sbjct: 384 LLCGPPGLGKTTLAHVIAQHAG 405
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 187 ILMYGPPGTGKTLIARAVA 243
IL+ GP G+GKTL+A+ +A
Sbjct: 273 ILLLGPTGSGKTLLAQTIA 291
>SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)
Length = 628
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 166 GVKPPRGILMYGPPGTGKTL 225
G P L++GPPGTGKT+
Sbjct: 587 GQSRPTPYLLFGPPGTGKTV 606
>SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 181 RGILMYGPPGTGKTLIARAVANETGLSSF 267
+ +L+ GP G GK ++ + ETG + F
Sbjct: 208 KSVLITGPRGVGKKMLVHCICTETGANLF 236
>SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 452 DAYGWHEEVVPRDRDGGHERPNSIDPALRRFGRFDREID 568
D +G H V+P + D G R I L+RF ++E++
Sbjct: 279 DGFGLHGHVLPSNEDAG-RRQEMIAQCLQRFAESNQEVE 316
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 172 KPPRG-ILMYGPPGTGKTLIARAVANETGLSSF 267
+ P+G +L+ G G GKT ++R VA GLS F
Sbjct: 2870 RQPQGHLLLIGVSGAGKTTLSRFVAWMNGLSVF 2902
>SB_48716| Best HMM Match : Galactosyl_T (HMM E-Value=1.2)
Length = 323
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 139 RHPSLFKAIGVKPPRGILMYGPPGTGKTLI 228
RHP+L +IG+ P ++ P TGK +
Sbjct: 45 RHPALIDSIGITPRNNSHIFSPRITGKVFL 74
>SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23)
Length = 172
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 34 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 129
KREEE E L + + C+K+L ++E++E
Sbjct: 63 KREEELELLLETRTEKLSECKKRLLDLEEIIE 94
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 34 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 129
KREEE E L + + C+K+L ++E++E
Sbjct: 664 KREEELELLLETRTEKLSECKKRLLDLEEIIE 695
>SB_40213| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.1e-07)
Length = 750
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 136 LRHPSLFKAIGV--KPPRGILMYGPPGTGKTLIARAVANETGL 258
LRHPS+ IGV KP +L P G+ +L+++ GL
Sbjct: 310 LRHPSIINMIGVALKPRALVLELAPLGSLSSLLSKGEGLSRGL 352
>SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 19 DGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEM 123
D + + EEEEE +G+D+ G ++L +I+E+
Sbjct: 255 DDDETEDEEEEEEQPVMGWDEYGTSPQRLQRIREL 289
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +1
Query: 169 VKPPR-GILMYGPPGTGKTLIARAVANE 249
++P R I++ GPPG+GKT +A+ + ++
Sbjct: 1245 IRPDRIVIILRGPPGSGKTHVAKLIKDK 1272
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNMKLGDDVDLEQ 657
P + I IHTQ M L +DV+LE+
Sbjct: 12 PDEKTKRRIFNIHTQRMTLAEDVNLEE 38
>SB_19245| Best HMM Match : ADK (HMM E-Value=0)
Length = 188
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 172 KPPRGILMYGPPGTGKTLIARAVANETGL 258
+P R I+M GPPG+GK ++ + + G+
Sbjct: 30 EPVRAIIM-GPPGSGKGTVSERIVRDFGV 57
>SB_49278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 85 GGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGLSS 264
GG +A +MV P RH + + + P GI + T +I V N+ LSS
Sbjct: 457 GGSSSSIASSDQMVSSPTRHSPVSTSPSRRSPSGITL----NTTVQIIQAPVTNQQSLSS 512
>SB_13297| Best HMM Match : RnaseH (HMM E-Value=0.37)
Length = 393
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = -1
Query: 658 SVQDRRRLLASCSGCVCAESRGGRSLGDAD-------VDLAVEPPEAPQRRVDGVRPFV 503
S D R L A S R G+S GDAD D + PPEA R D +RPF+
Sbjct: 238 SASDHRWLSAFSSFDFTISYRPGKSCGDADSLSRMPLADNSCSPPEA--SREDFLRPFL 294
>SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1292
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = -1
Query: 658 SVQDRRRLLASCSGCVCAESRGGRSLGDAD-------VDLAVEPPEAPQRRVDGVRPFV 503
S D R L A S R G+S GDAD D + PPEA R D +RPF+
Sbjct: 833 SASDHRWLSALSSFDFTISYRPGKSCGDADGLSRVPQADNSFSPPEA--SREDFLRPFL 889
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,997,625
Number of Sequences: 59808
Number of extensions: 440561
Number of successful extensions: 1446
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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