Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021363
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 184 7e-47
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 161 6e-40
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 161 6e-40
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 92 4e-19
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 90 2e-18
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 90 2e-18
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 89 2e-18
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 89 4e-18
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 89 4e-18
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 89 4e-18
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 88 6e-18
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 85 4e-17
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 85 6e-17
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 81 7e-16
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 80 2e-15
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 80 2e-15
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 80 2e-15
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 79 2e-15
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 79 2e-15
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 79 2e-15
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 79 2e-15
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 79 2e-15
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 77 9e-15
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 75 5e-14
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 73 3e-13
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 64 7e-11
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 62 4e-10
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 62 4e-10
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 62 4e-10
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 61 8e-10
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 61 8e-10
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 37 0.015
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 37 0.015
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 33 0.14
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 31 1.0
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 31 1.0
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 30 1.3
AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormo... 30 1.3
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 30 1.8
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 30 1.8
U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 2.3
Z73972-4|CAA98260.1| 666|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 28 7.1
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 27 9.4
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 27 9.4
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 27 9.4
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 184 bits (447), Expect = 7e-47
Identities = 112/225 (49%), Positives = 136/225 (60%), Gaps = 5/225 (2%)
Frame = +1
Query: 4 TRIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPR 183
T IH +G+PIKREEEEE++N +GYDD+GG RKQLAQIKEMVELPLRHP LFKAIG+KPPR
Sbjct: 186 TMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPR 245
Query: 184 GILMYGPPGTGKTLIARAVANETGLSSF*LMDRRSCLSWRENRSQTSVXXXXXXXXXXXX 363
GIL++GPPGTGKTLIARAVANETG S F L++ +S S++++
Sbjct: 246 GILLFGPPGTGKTLIARAVANETG-SFFFLINGPEVMSKMSGESESNLRKAFEECEKNQP 304
Query: 364 XXXXXXXXXXHQRERKPTVKWKDVSFHSY*RLWMA*XXXXXXXXXXXXXAELHRPGA--A 537
+R+ T +V +L + A +RP +
Sbjct: 305 AILFIDEIDAIAPKREKTN--GEVERRIVSQL-LTLMDGVKGRSNLVVIAATNRPNSIDG 361
Query: 538 ALRAVRPRDRHRH---PRANGRLEILRIHTQNMKLGDDVDLEQIA 663
ALR DR P A GRLEILRIHT+NMKL DDVDLEQIA
Sbjct: 362 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIA 406
Score = 147 bits (356), Expect = 7e-36
Identities = 68/85 (80%), Positives = 81/85 (95%)
Frame = +3
Query: 255 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERR 434
+FFFLINGPE+MSK++GESESNLRKAFEE +KN PAI+FIDE+DAIAPKREKT+GEVERR
Sbjct: 270 SFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVERR 329
Query: 435 IVSQLLTLMDGMKKSSHVIVMAATN 509
IVSQLLTLMDG+K S+++V+AATN
Sbjct: 330 IVSQLLTLMDGVKGRSNLVVIAATN 354
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +1
Query: 37 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 216
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 471 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 529
Query: 217 KTLIARAVANE 249
KTL+A+A+ANE
Sbjct: 530 KTLLAKAIANE 540
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Frame = +3
Query: 252 RAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR----EKTHG 419
+A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA R G
Sbjct: 542 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGG 601
Query: 420 EVERRIVSQLLTLMDGMKKSSHVIVMAATN 509
R+++Q+LT MDGM +V ++ ATN
Sbjct: 602 GASDRVINQVLTEMDGMNAKKNVFIIGATN 631
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPE 583
RPNSID ALRRFGRFDREIDIGIP+
Sbjct: 355 RPNSIDGALRRFGRFDREIDIGIPD 379
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G RP+ IDPA+ R GR D+ I I +P+ +
Sbjct: 628 GATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS 659
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 161 bits (390), Expect = 6e-40
Identities = 78/108 (72%), Positives = 91/108 (84%)
Frame = +1
Query: 4 TRIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPR 183
T IH +G+PIKREEEEEALN VGYDD+GG RKQLAQIKEMVELPLRHP LFKAIGVKPPR
Sbjct: 185 TVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPR 244
Query: 184 GILMYGPPGTGKTLIARAVANETGLSSF*LMDRRSCLSWRENRSQTSV 327
GIL++GPPGTGKTLIARAVANETG + F L++ +S S++++
Sbjct: 245 GILLFGPPGTGKTLIARAVANETG-AFFFLINGPEIMSKMSGESESNL 291
Score = 151 bits (366), Expect = 5e-37
Identities = 70/85 (82%), Positives = 80/85 (94%)
Frame = +3
Query: 255 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERR 434
AFFFLINGPEIMSK++GESESNLRKAF E +KNSPAI+FIDE+DAIAPKREK HGEVE+R
Sbjct: 269 AFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEKR 328
Query: 435 IVSQLLTLMDGMKKSSHVIVMAATN 509
IVSQLLTLMDG+K +HV+V+AATN
Sbjct: 329 IVSQLLTLMDGLKTRAHVVVIAATN 353
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +1
Query: 37 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 216
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 217 KTLIARAVANE 249
KTL+A+A+ANE
Sbjct: 529 KTLLAKAIANE 539
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 RAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE--- 422
+A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA R + G+
Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG 600
Query: 423 VERRIVSQLLTLMDGMKKSSHVIVMAATN 509
R+++Q+LT MDGM +V ++ ATN
Sbjct: 601 AADRVINQVLTEMDGMNAKKNVFIIGATN 629
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNMKLGDDVDLEQIA 663
P A GRLEILRIHT+NMKLG+DVDLEQ+A
Sbjct: 377 PDAVGRLEILRIHTKNMKLGEDVDLEQVA 405
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPE 583
RPNSID ALRRFGRFDREIDIGIP+
Sbjct: 354 RPNSIDGALRRFGRFDREIDIGIPD 378
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G RP+ IDPA+ R GR D+ I I +P+ +
Sbjct: 626 GATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS 657
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 161 bits (390), Expect = 6e-40
Identities = 78/108 (72%), Positives = 91/108 (84%)
Frame = +1
Query: 4 TRIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPR 183
T IH +G+PIKREEEEEALN VGYDD+GG RKQLAQIKEMVELPLRHP LFKAIGVKPPR
Sbjct: 185 TVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPR 244
Query: 184 GILMYGPPGTGKTLIARAVANETGLSSF*LMDRRSCLSWRENRSQTSV 327
GIL++GPPGTGKTLIARAVANETG + F L++ +S S++++
Sbjct: 245 GILLFGPPGTGKTLIARAVANETG-AFFFLINGPEIMSKMSGESESNL 291
Score = 151 bits (366), Expect = 5e-37
Identities = 70/85 (82%), Positives = 80/85 (94%)
Frame = +3
Query: 255 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERR 434
AFFFLINGPEIMSK++GESESNLRKAF E +KNSPAI+FIDE+DAIAPKREK HGEVE+R
Sbjct: 269 AFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEKR 328
Query: 435 IVSQLLTLMDGMKKSSHVIVMAATN 509
IVSQLLTLMDG+K +HV+V+AATN
Sbjct: 329 IVSQLLTLMDGLKTRAHVVVIAATN 353
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +1
Query: 37 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 216
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 217 KTLIARAVANE 249
KTL+A+A+ANE
Sbjct: 529 KTLLAKAIANE 539
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 RAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE--- 422
+A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA R + G+
Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG 600
Query: 423 VERRIVSQLLTLMDGMKKSSHVIVMAATN 509
R+++Q+LT MDGM +V ++ ATN
Sbjct: 601 AADRVINQVLTEMDGMNAKKNVFIIGATN 629
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNMKLGDDVDLEQIA 663
P A GRLEILRIHT+NMKLG+DVDLEQ+A
Sbjct: 377 PDAVGRLEILRIHTKNMKLGEDVDLEQVA 405
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPE 583
RPNSID ALRRFGRFDREIDIGIP+
Sbjct: 354 RPNSIDGALRRFGRFDREIDIGIPD 378
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G RP+ IDPA+ R GR D+ I I +P+ +
Sbjct: 626 GATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS 657
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 91.9 bits (218), Expect = 4e-19
Identities = 36/62 (58%), Positives = 50/62 (80%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V Y D+GGC+ Q+ +++E+VE PL HP + +G++PP+G+L+YGPPGTGKTL ARAVAN
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
Query: 247 ET 252
T
Sbjct: 234 RT 235
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR--EKTHGEVE 428
A F + G E++ K GE +R+ FE A +IF DE+DA+ R + G+ E
Sbjct: 237 ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNE 296
Query: 429 -RRIVSQLLTLMDGMKKSSHVIVMAATN 509
+R + +L+ +DG ++ V+ ATN
Sbjct: 297 VQRTMLELINQLDGFDPRGNIKVLMATN 324
Score = 34.7 bits (76), Expect = 0.062
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPE 583
RP+++DPAL R GR DR+++ +P+
Sbjct: 325 RPDTLDPALMRPGRLDRKVEFALPD 349
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 89.8 bits (213), Expect = 2e-18
Identities = 36/75 (48%), Positives = 56/75 (74%)
Frame = +1
Query: 25 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 204
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ PP+G L++GP
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 184
Query: 205 PGTGKTLIARAVANE 249
PGTGKTL+ARAVA++
Sbjct: 185 PGTGKTLLARAVASQ 199
Score = 51.2 bits (117), Expect = 7e-07
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR--EKTHGEVE-R 431
F + I+ K GES +R+ F A + P I+F+DE+DAI +R E T + E +
Sbjct: 204 FLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQ 263
Query: 432 RIVSQLLTLMDGMKKSSHVIVMAATN 509
R + +LL +DG V V+ ATN
Sbjct: 264 RTLMELLNQLDGFDSLGKVKVIMATN 289
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIP 580
RP+++DPAL R GR DR+I+IG+P
Sbjct: 290 RPDTLDPALLRPGRLDRKIEIGLP 313
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 89.8 bits (213), Expect = 2e-18
Identities = 36/75 (48%), Positives = 56/75 (74%)
Frame = +1
Query: 25 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 204
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ PP+G L++GP
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 192
Query: 205 PGTGKTLIARAVANE 249
PGTGKTL+ARAVA++
Sbjct: 193 PGTGKTLLARAVASQ 207
Score = 51.2 bits (117), Expect = 7e-07
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR--EKTHGEVE-R 431
F + I+ K GES +R+ F A + P I+F+DE+DAI +R E T + E +
Sbjct: 212 FLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQ 271
Query: 432 RIVSQLLTLMDGMKKSSHVIVMAATN 509
R + +LL +DG V V+ ATN
Sbjct: 272 RTLMELLNQLDGFDSLGKVKVIMATN 297
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIP 580
RP+++DPAL R GR DR+I+IG+P
Sbjct: 298 RPDTLDPALLRPGRLDRKIEIGLP 321
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 89.4 bits (212), Expect = 2e-18
Identities = 35/60 (58%), Positives = 51/60 (85%)
Frame = +1
Query: 73 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 252
Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+L++GPPGTGKTL+ARAVA+ T
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHT 217
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK--THGEVE-R 431
F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I R + + G+ E +
Sbjct: 221 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQ 280
Query: 432 RIVSQLLTLMDGMKKSSHVIVMAATN 509
R + +LL +DG + + ++ V+ ATN
Sbjct: 281 RTMLELLNQLDGFEATKNIKVIMATN 306
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPERTA 592
R + +DPAL R GR DR+I+ P+ A
Sbjct: 307 RIDILDPALLRPGRIDRKIEFPAPDEKA 334
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 88.6 bits (210), Expect = 4e-18
Identities = 34/60 (56%), Positives = 48/60 (80%)
Frame = +1
Query: 73 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 252
+DDIGGC Q+ ++KE VELPL HP ++ +G+ P+G+++YG PGTGKTL+A+AVAN T
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANST 241
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT--HGEVE 428
A F G +++ K +GE +R+ F+ A + +P+I+FIDE+DA+ KR T GE E
Sbjct: 243 ATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQE 302
Query: 429 -RRIVSQLLTLMDGMKKSSHVIVMAATN 509
+R + +LL +DG + V ++ ATN
Sbjct: 303 VQRTLLELLNQLDGFESRGDVKIIMATN 330
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIP-ERTAASRFCAYT 616
R +S+DPAL R GR DR+I++ P E+T F +T
Sbjct: 331 RIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIHT 367
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 88.6 bits (210), Expect = 4e-18
Identities = 35/60 (58%), Positives = 50/60 (83%)
Frame = +1
Query: 73 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 252
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 153 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 212
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR-EKTHG---EVE 428
F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I R E + G EV+
Sbjct: 216 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQ 275
Query: 429 RRIVSQLLTLMDGMKKSSHVIVMAATN 509
R ++ +LL +DG + + ++ V+ ATN
Sbjct: 276 RTML-ELLNQLDGFEATKNIKVIMATN 301
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 88.6 bits (210), Expect = 4e-18
Identities = 35/60 (58%), Positives = 50/60 (83%)
Frame = +1
Query: 73 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 252
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR-EKTHG---EVE 428
F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I R E + G EV+
Sbjct: 237 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQ 296
Query: 429 RRIVSQLLTLMDGMKKSSHVIVMAATN 509
R ++ +LL +DG + + ++ V+ ATN
Sbjct: 297 RTML-ELLNQLDGFEATKNIKVIMATN 322
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 87.8 bits (208), Expect = 6e-18
Identities = 37/78 (47%), Positives = 56/78 (71%)
Frame = +1
Query: 19 DGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMY 198
D +P+ + E Y D+GG +Q+ +IKE VELPL HP ++ +G++PP+G+++Y
Sbjct: 169 DTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILY 228
Query: 199 GPPGTGKTLIARAVANET 252
G PGTGKTL+A+AVAN+T
Sbjct: 229 GCPGTGKTLLAKAVANQT 246
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR--EKTHGEVE 428
A F I G E++ K G+ +R+ F A++N+P+I+FIDE+DA+ KR + GE E
Sbjct: 248 ATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGERE 307
Query: 429 -RRIVSQLLTLMDGMKKSSHVIVMAATN 509
+R + +LL +DG V V+ ATN
Sbjct: 308 IQRTMLELLNQLDGFDSRGDVKVLMATN 335
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIP-ERTAASRFCAYTPR 622
R S+DPAL R GR DR+I+ +P E+T F +T R
Sbjct: 336 RIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSR 374
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 85.0 bits (201), Expect = 4e-17
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
+ Y DIGG Q +++E VELPL H L++ IG+ PPRG+LMYGPPG GKT++A+AVA
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217
Query: 247 ETGLS 261
T S
Sbjct: 218 NTAAS 222
Score = 67.7 bits (158), Expect = 7e-12
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR--EKTHGEVE 428
A F + G E + K GE +R F A +NSP+IIFIDE+DAIA KR +T + E
Sbjct: 221 ASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADRE 280
Query: 429 -RRIVSQLLTLMDGMKKSSHVIVMAATN 509
+RI+ +LL MDG +S++V V+ ATN
Sbjct: 281 VQRILLELLNQMDGFDQSTNVKVIMATN 308
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPER 586
R +++DPAL R GR DR+I+ +P+R
Sbjct: 309 RQDTLDPALLRPGRLDRKIEFPLPDR 334
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 84.6 bits (200), Expect = 6e-17
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +1
Query: 73 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 252
Y DIGGC KQ+ ++ E V LP+ H F +G+ PP+G+LMYGPPGTGKT++ARAVA +T
Sbjct: 176 YSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQT 235
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 RAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR---EKTHGE 422
++ F + GP+++ G+ +R AF A + +PAIIFIDELDAI KR EK
Sbjct: 236 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 295
Query: 423 VERRIVSQLLTLMDGMKKSSHVIVMAATN 509
+R + +LL +DG + + + V+AATN
Sbjct: 296 EVQRTMLELLNQLDGFQPNDDIKVIAATN 324
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 574 HPRANGRLEILRIHTQNMKLGDDVDLEQIA 663
HP + R I++IH++ M + DV+ E++A
Sbjct: 347 HPNEDARARIMQIHSRKMNVNKDVNFEELA 376
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPERTAASR 601
R + +DPAL R GR DR+I++ P A +R
Sbjct: 325 RIDVLDPALLRSGRLDRKIELPHPNEDARAR 355
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 81.0 bits (191), Expect = 7e-16
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR--EKTHGEVERR 434
F + GPE+ SK G+SE +R F A + +P I+F DE+DA+ R EK+ G V R
Sbjct: 521 FLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEKSSG-VSDR 579
Query: 435 IVSQLLTLMDGMKKSSHVIVMAATN 509
+++QLLT +DG++KSS VI++AATN
Sbjct: 580 VLAQLLTELDGLEKSSRVILLAATN 604
Score = 71.7 bits (168), Expect = 4e-13
Identities = 31/65 (47%), Positives = 45/65 (69%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V ++DIGG + +I++ V P +HP F+ G+ PP GIL+YGPPG KTLIARA+A+
Sbjct: 456 VSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALAS 515
Query: 247 ETGLS 261
E ++
Sbjct: 516 EAKMN 520
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 79 DIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVA 243
+IGGC +++ V P+R + P +L++G PG+GKTL+ + VA
Sbjct: 247 NIGGCFTAKQVLEDYVISPVRQK--------ESPCSVLIWGLPGSGKTLLLKEVA 293
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIP 580
RP+ +D AL R GR DR I +G+P
Sbjct: 605 RPDQLDSALLRPGRLDRAIYVGLP 628
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT--HGEVERR 434
F + GPE+++K G+SE NLRK FE A + SP +IF DE+D++AP R + G V R
Sbjct: 521 FLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGRNGDSGGVIDR 580
Query: 435 IVSQLLTLMDGMKKS--SHVIVMAATN 509
IVSQLL +D + S + V VM ATN
Sbjct: 581 IVSQLLAELDKLHNSPLTKVFVMGATN 607
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V ++D+GG L + K+ V +R +LF + +K GI++YG PG GKTLIA+AVA
Sbjct: 462 VRWEDVGG----LEETKQTVLESIR-TNLFGSRALKRS-GIILYGSPGCGKTLIAKAVAT 515
Query: 247 E 249
E
Sbjct: 516 E 516
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT--HGEVERR 434
F + GPE+++K G+SE NLRK FE A + SP +IF DE+D++AP R + G V R
Sbjct: 521 FLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGRNGDSGGVIDR 580
Query: 435 IVSQLLTLMDGMKKS--SHVIVMAATN 509
IVSQLL +D + S + V VM ATN
Sbjct: 581 IVSQLLAELDKLHNSPLTKVFVMGATN 607
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V ++D+GG L + K+ V +R +LF + +K GI++YG PG GKTLIA+AVA
Sbjct: 462 VRWEDVGG----LEETKQTVLESIR-TNLFGSRALKRS-GIILYGSPGCGKTLIAKAVAT 515
Query: 247 E 249
E
Sbjct: 516 E 516
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT--HGEVERR 434
F + GPE+++K G+SE NLRK FE A + SP +IF DE+D++AP R + G V R
Sbjct: 521 FLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGRNGDSGGVIDR 580
Query: 435 IVSQLLTLMDGMKKS--SHVIVMAATN 509
IVSQLL +D + S + V VM ATN
Sbjct: 581 IVSQLLAELDKLHNSPLTKVFVMGATN 607
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V ++D+GG L + K+ V +R +LF + +K GI++YG PG GKTLIA+AVA
Sbjct: 462 VRWEDVGG----LEETKQTVLESIR-TNLFGSRALKRS-GIILYGSPGCGKTLIAKAVAT 515
Query: 247 E 249
E
Sbjct: 516 E 516
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 79.4 bits (187), Expect = 2e-15
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 241 ANE 249
ANE
Sbjct: 446 ANE 448
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +3
Query: 249 NRAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVE 428
N+ FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R ++
Sbjct: 454 NKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIH 513
Query: 429 RRIVSQLLTLMDGMKKSSHVIVMAATN 509
IVS LL LMDG+ V+V+ ATN
Sbjct: 514 ASIVSTLLALMDGLDGRGEVVVIGATN 540
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G R +++DPALRR GRFDRE+ +P+ A
Sbjct: 537 GATNRLDTLDPALRRPGRFDRELRFSLPDLNA 568
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 79.4 bits (187), Expect = 2e-15
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 443
Query: 241 ANE 249
ANE
Sbjct: 444 ANE 446
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +3
Query: 249 NRAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVE 428
N+ FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R ++
Sbjct: 452 NKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIH 511
Query: 429 RRIVSQLLTLMDGMKKSSHVIVMAATN 509
IVS LL LMDG+ V+V+ ATN
Sbjct: 512 ASIVSTLLALMDGLDGRGEVVVIGATN 538
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G R +++DPALRR GRFDRE+ +P+ A
Sbjct: 535 GATNRLDTLDPALRRPGRFDRELRFSLPDLNA 566
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 79.4 bits (187), Expect = 2e-15
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 241 ANE 249
ANE
Sbjct: 446 ANE 448
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +3
Query: 249 NRAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVE 428
N+ FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R ++
Sbjct: 454 NKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIH 513
Query: 429 RRIVSQLLTLMDGMKKSSHVIVMAATN 509
IVS LL LMDG+ V+V+ ATN
Sbjct: 514 ASIVSTLLALMDGLDGRGEVVVIGATN 540
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G R +++DPALRR GRFDRE+ +P+ A
Sbjct: 537 GATNRLDTLDPALRRPGRFDRELRFSLPDLNA 568
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 79.4 bits (187), Expect = 2e-15
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 241 ANE 249
ANE
Sbjct: 446 ANE 448
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +3
Query: 249 NRAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVE 428
N+ FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R ++
Sbjct: 454 NKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIH 513
Query: 429 RRIVSQLLTLMDGMKKSSHVIVMAATN 509
IVS LL LMDG+ V+V+ ATN
Sbjct: 514 ASIVSTLLALMDGLDGRGEVVVIGATN 540
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G R +++DPALRR GRFDRE+ +P+ A
Sbjct: 537 GATNRLDTLDPALRRPGRFDRELRFSLPDLNA 568
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 79.4 bits (187), Expect = 2e-15
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 443
Query: 241 ANE 249
ANE
Sbjct: 444 ANE 446
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +3
Query: 249 NRAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVE 428
N+ FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R ++
Sbjct: 452 NKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIH 511
Query: 429 RRIVSQLLTLMDGMKKSSHVIVMAATN 509
IVS LL LMDG+ V+V+ ATN
Sbjct: 512 ASIVSTLLALMDGLDGRGEVVVIGATN 538
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G R +++DPALRR GRFDRE+ +P+ A
Sbjct: 535 GATNRLDTLDPALRRPGRFDRELRFSLPDLNA 566
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 79.4 bits (187), Expect = 2e-15
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 241 ANE 249
ANE
Sbjct: 446 ANE 448
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +3
Query: 249 NRAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVE 428
N+ FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R ++
Sbjct: 454 NKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIH 513
Query: 429 RRIVSQLLTLMDGMKKSSHVIVMAATN 509
IVS LL LMDG+ V+V+ ATN
Sbjct: 514 ASIVSTLLALMDGLDGRGEVVVIGATN 540
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G R +++DPALRR GRFDRE+ +P+ A
Sbjct: 537 GATNRLDTLDPALRRPGRFDRELRFSLPDLNA 568
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 79.4 bits (187), Expect = 2e-15
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 241 ANE 249
ANE
Sbjct: 446 ANE 448
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +3
Query: 249 NRAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVE 428
N+ FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R ++
Sbjct: 454 NKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIH 513
Query: 429 RRIVSQLLTLMDGMKKSSHVIVMAATN 509
IVS LL LMDG+ V+V+ ATN
Sbjct: 514 ASIVSTLLALMDGLDGRGEVVVIGATN 540
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTA 592
G R +++DPALRR GRFDRE+ +P+ A
Sbjct: 537 GATNRLDTLDPALRRPGRFDRELRFSLPDLNA 568
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
FF + GPE+++ GESE +R F+ A + P +IF DE+DA+ PKR R+V
Sbjct: 596 FFSVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGARLV 655
Query: 441 SQLLTLMDGMKKSSHVIVMAATN 509
+QLLT MDG++ V ++ ATN
Sbjct: 656 NQLLTEMDGVEGRQKVFLIGATN 678
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/61 (47%), Positives = 47/61 (77%)
Frame = +3
Query: 282 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 461
E++S ++GE+E +R+ F+ A +NSP I+ +D++DAIAP+RE E+ERR+VSQL + +
Sbjct: 274 ELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSL 333
Query: 462 D 464
D
Sbjct: 334 D 334
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 25 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK-PPRGILMYG 201
+P + E + V +DDIG + Q++ + P++ F A+G+ P+GIL+ G
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCG 575
Query: 202 PPGTGKTLIARAVANETGLSSF 267
PPG GKTL+A+AVANETG++ F
Sbjct: 576 PPGCGKTLLAKAVANETGMNFF 597
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V ++ IGG +Q ++ + + L+ P F +GV PPRG +++GPPG GKT+ A+AVA
Sbjct: 203 VKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAG 261
Query: 247 ETGL 258
E +
Sbjct: 262 ELAI 265
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTAASR 601
G RP+++D LRR GRF EI +GIP+ TA +
Sbjct: 375 GTTSRPDAVDGRLRRTGRFQNEISLGIPDETAREK 409
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 74.9 bits (176), Expect = 5e-14
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
F + GPE+++ GESE +R F+ A + P +IF DE+DA+ PKR R+V
Sbjct: 596 FISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGARLV 655
Query: 441 SQLLTLMDGMKKSSHVIVMAATN 509
+QLLT MDG++ V ++ ATN
Sbjct: 656 NQLLTEMDGVEGRQKVFLIGATN 678
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/61 (47%), Positives = 47/61 (77%)
Frame = +3
Query: 282 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 461
E++S ++GE+E +R+ F+ A +NSP I+ +D++DAIAP+RE E+ERR+VSQL + +
Sbjct: 274 ELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSL 333
Query: 462 D 464
D
Sbjct: 334 D 334
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 25 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK-PPRGILMYG 201
+P + E + V +DDIG + Q++ + P++ F A+G+ P+GIL+ G
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCG 575
Query: 202 PPGTGKTLIARAVANETGLS 261
PPG GKTL+A+AVANETG++
Sbjct: 576 PPGCGKTLLAKAVANETGMN 595
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V ++ IGG +Q ++ + + L+ P F +GV PPRG +++GPPG GKT+ A+AVA
Sbjct: 203 VKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAG 261
Query: 247 ETGL 258
E +
Sbjct: 262 ELAI 265
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERTAASR 601
G RP+++D LRR GRF+ EI +GIP+ TA +
Sbjct: 375 GTTSRPDAVDGGLRRAGRFENEISLGIPDETAREK 409
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +1
Query: 73 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 252
+D+IGGC + +A++K+ + LPLR S + + PPRGIL+YGPPG GKTL+A+AVA
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 138
Query: 253 G 255
G
Sbjct: 139 G 139
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
F + + K GES+ F A K P IIFIDE+D+ R+ E +
Sbjct: 142 FINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQSHDHESTAMMK 201
Query: 441 SQLLTLMDGMKKS-SHVIVMAATN 509
+Q +TL DG S +IVM ATN
Sbjct: 202 AQFMTLWDGFSSSGDQIIVMGATN 225
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +1
Query: 73 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 252
+D+IGGC + +A++K+ + LPLR S + + PPRGIL+YGPPG GKTL+A+AVA
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141
Query: 253 G 255
G
Sbjct: 142 G 142
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
F + + K GES+ F A K P IIFIDE+D+ R+ E +
Sbjct: 145 FINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQSHDHESTAMMK 204
Query: 441 SQLLTLMDGMKKS-SHVIVMAATN 509
+Q +TL DG S +IVM ATN
Sbjct: 205 AQFMTLWDGFSSSGDQIIVMGATN 228
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 270 INGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQL 449
+ GPE++SK G SE N+R FE+A +P I+F DELD++APKR V R+V+QL
Sbjct: 67 VKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQL 126
Query: 450 LTLMDGMKKS-SHVIVMAATN 509
LT +DG + VI++ T+
Sbjct: 127 LTELDGAEGGMKGVIILGCTS 147
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/62 (37%), Positives = 42/62 (67%)
Frame = +1
Query: 76 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETG 255
+D+GG +Q +++++ P ++P LF+++GV +GIL++GP G GKTL+A A + +
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 61
Query: 256 LS 261
S
Sbjct: 62 FS 63
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERT 589
G R + ID AL R GRFD + G PE+T
Sbjct: 144 GCTSRIDLIDDALLRPGRFDHHVYCGHPEKT 174
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 270 INGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQL 449
+ GPE++SK G SE N+R FE+A +P I+F DELD++APKR V R+V+QL
Sbjct: 793 VKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQL 852
Query: 450 LTLMDGMKKS-SHVIVMAATN 509
LT +DG + VI++ T+
Sbjct: 853 LTELDGAEGGMKGVIILGCTS 873
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/62 (37%), Positives = 42/62 (67%)
Frame = +1
Query: 76 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETG 255
+D+GG +Q +++++ P ++P LF+++GV +GIL++GP G GKTL+A A + +
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 787
Query: 256 LS 261
S
Sbjct: 788 FS 789
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERT 589
G R + ID AL R GRFD + G PE+T
Sbjct: 870 GCTSRIDLIDDALLRPGRFDHHVYCGHPEKT 900
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 270 INGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQL 449
+ GPE++SK G SE N+R FE+A +P I+F DELD++APKR V R+V+QL
Sbjct: 793 VKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQL 852
Query: 450 LTLMDGMKKS-SHVIVMAATN 509
LT +DG + VI++ T+
Sbjct: 853 LTELDGAEGGMKGVIILGCTS 873
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/62 (37%), Positives = 42/62 (67%)
Frame = +1
Query: 76 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETG 255
+D+GG +Q +++++ P ++P LF+++GV +GIL++GP G GKTL+A A + +
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 787
Query: 256 LS 261
S
Sbjct: 788 FS 789
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 497 GGHERPNSIDPALRRFGRFDREIDIGIPERT 589
G R + ID AL R GRFD + G PE+T
Sbjct: 870 GCTSRIDLIDDALLRPGRFDHHVYCGHPEKT 900
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = +1
Query: 49 EEALNAVGY--DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKT 222
+E L+ G DD+ GC A ++E V LP +P+LFK + +P +GIL++GPPG GKT
Sbjct: 167 DEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFKGLR-QPVKGILLFGPPGNGKT 225
Query: 223 LIARAVANET 252
L+A+AVA E+
Sbjct: 226 LLAKAVAGES 235
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = +3
Query: 249 NRAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVE 428
++ FF I+ + SK G+SE +R F+ A P+IIFIDE+D+I +R + EV
Sbjct: 235 SKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQPSIIFIDEIDSILCERSEKDAEVS 294
Query: 429 RRIVSQLLTLMDGMKKSS--HVIVMAATN 509
RR+ ++ L DG S+ ++V+ ATN
Sbjct: 295 RRMKTEFLVQFDGATSSADDRILVIGATN 323
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 10/93 (10%)
Frame = +3
Query: 267 LINGPEIMSKLAGESESNLRKAFEEADK-------NSPA-IIFIDELDAIAPKREKTHG- 419
++NGP+I+ K GESESN+RK F +A++ NS II DE+DAI +R G
Sbjct: 361 IVNGPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGS 420
Query: 420 -EVERRIVSQLLTLMDGMKKSSHVIVMAATNGR 515
V +V+QLL+ MDG+++ ++++V+ TN R
Sbjct: 421 SSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRR 453
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1
Query: 145 PSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
P + +G+K RGIL++GPPGTGKTL+AR +
Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQI 350
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNM----KLGDDVDLEQIAAR 669
P GRL+IL+IHT M K+ +VDLE I+ R
Sbjct: 475 PDETGRLQILKIHTARMREYNKMDPNVDLEDISKR 509
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 10/93 (10%)
Frame = +3
Query: 267 LINGPEIMSKLAGESESNLRKAFEEADK-------NSPA-IIFIDELDAIAPKREKTHG- 419
++NGP+I+ K GESESN+RK F +A++ NS II DE+DAI +R G
Sbjct: 361 IVNGPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGS 420
Query: 420 -EVERRIVSQLLTLMDGMKKSSHVIVMAATNGR 515
V +V+QLL+ MDG+++ ++++V+ TN R
Sbjct: 421 SSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRR 453
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1
Query: 145 PSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
P + +G+K RGIL++GPPGTGKTL+AR +
Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQI 350
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNM----KLGDDVDLEQIAAR 669
P GRL+IL+IHT M K+ +VDLE I+ R
Sbjct: 475 PDETGRLQILKIHTARMREYNKMDPNVDLEDISKR 509
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 10/93 (10%)
Frame = +3
Query: 267 LINGPEIMSKLAGESESNLRKAFEEADK-------NSPA-IIFIDELDAIAPKREKTHG- 419
++NGP+I+ K GESESN+RK F +A++ NS II DE+DAI +R G
Sbjct: 295 IVNGPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGS 354
Query: 420 -EVERRIVSQLLTLMDGMKKSSHVIVMAATNGR 515
V +V+QLL+ MDG+++ ++++V+ TN R
Sbjct: 355 SSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRR 387
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1
Query: 145 PSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
P + +G+K RGIL++GPPGTGKTL+AR +
Sbjct: 253 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQI 284
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = +1
Query: 577 PRANGRLEILRIHTQNM----KLGDDVDLEQIAAR 669
P GRL+IL+IHT M K+ +VDLE I+ R
Sbjct: 409 PDETGRLQILKIHTARMREYNKMDPNVDLEDISKR 443
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
N +G+ D+ G ++E+V LP + P +F I PP+G+L++GPPGTGKT+I R V
Sbjct: 311 NEIGWADVAGLEGAKKALREIVVLPFKRPDVFTGIRA-PPKGVLLFGPPGTGKTMIGRCV 369
Query: 241 ANETGLSSF 267
A++ + F
Sbjct: 370 ASQCKATFF 378
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 RAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVER 431
+A FF I+ + SK GE E +R F A P++IFIDE+D++ R ++ E R
Sbjct: 374 KATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSESEHESSR 433
Query: 432 RIVSQLLTLMDGMKKS--SHVIVMAATN 509
RI ++ L +DG+ + ++V+ ATN
Sbjct: 434 RIKTEFLVQLDGVNTAPDERLLVLGATN 461
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V + DI G +KE V LP++ P LF KP +GIL++GPPGTGK+ IA+AVA
Sbjct: 115 VKWTDIAGLEGAKEALKEAVILPIKFPQLFTG-NRKPWQGILLFGPPGTGKSYIAKAVAT 173
Query: 247 ETGLSSF 267
E G S+F
Sbjct: 174 EAGESTF 180
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 440
FF I+ ++MSK GESE ++ F A ++ P+IIFIDE+D++ R E RRI
Sbjct: 180 FFSISSSDLMSKWLGESEKLVKNLFALAREHKPSIIFIDEIDSLCSARSDNESESARRIK 239
Query: 441 SQLLTLMDGM-KKSSHVIVMAATN 509
++ + M G+ + ++V+ ATN
Sbjct: 240 TEFMVQMQGVGLNNDGILVLGATN 263
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
+ + D+ GC + +I+E V+ L++P F +G K PRG L+ GPPG GKTL+A+A+A
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAA 340
Query: 247 ET 252
E+
Sbjct: 341 ES 342
Score = 61.3 bits (142), Expect = 6e-10
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE------ 422
F +NG E + + G S +R F+EA +P II+IDE+DAI KR + G
Sbjct: 346 FISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGG 405
Query: 423 ---VERRIVSQLLTLMDGMKKSSHVIVMAATN 509
E + ++QLL MDGM + V+V+A+TN
Sbjct: 406 GSGEEEQTLNQLLVEMDGMGSGNGVVVLASTN 437
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
V + D+ GC + +I E V L++P +K +G K P+G ++ GPPGTGKTL+A+A A
Sbjct: 290 VKFADVAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAG 348
Query: 247 ETGL 258
E +
Sbjct: 349 EANV 352
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHG----EVE 428
F ++G E + G + +R F A KNSP I+FIDE+DA+ KR G +
Sbjct: 354 FITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGGHSEQ 413
Query: 429 RRIVSQLLTLMDGM-KKSSHVIVMAATN 509
++QLL MDG S VIV+AATN
Sbjct: 414 ENTLNQLLVEMDGFTTDESSVIVIAATN 441
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 509 RPNSIDPALRRFGRFDREIDIGIPE 583
R + +D AL R GRFDR+I + +P+
Sbjct: 442 RVDILDSALLRPGRFDRQIYVPVPD 466
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +1
Query: 67 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 246
+ + D+ GC + +I+E V+ L++P F +G K PRG L+ GPPG GKTL+A+A+A
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAA 340
Query: 247 ET 252
E+
Sbjct: 341 ES 342
Score = 61.3 bits (142), Expect = 6e-10
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE------ 422
F +NG E + + G S +R F+EA +P II+IDE+DAI KR + G
Sbjct: 346 FISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGG 405
Query: 423 ---VERRIVSQLLTLMDGMKKSSHVIVMAATN 509
E + ++QLL MDGM + V+V+A+TN
Sbjct: 406 GSGEEEQTLNQLLVEMDGMGSGNGVVVLASTN 437
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 60.9 bits (141), Expect = 8e-10
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT-HGEVERRI 437
FF ++ ++ SK G+SE +R FE A +P+IIFIDE+D + +R + E RR+
Sbjct: 254 FFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRV 313
Query: 438 VSQLLTLMDGMKK---SSHVIVMAATN 509
S+ L MDG + S V V+AATN
Sbjct: 314 KSEFLVQMDGSQNKFDSRRVFVLAATN 340
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
N + DDI G + E V LPL P F+ + P + +++ GPPGTGKTLIARA+
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAI 246
Query: 241 ANETGLSSF*LMDRRSCLSWR 303
A+E+ + F + WR
Sbjct: 247 ASESSSTFFTVSSTDLSSKWR 267
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 60.9 bits (141), Expect = 8e-10
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT-HGEVERRI 437
FF ++ ++ SK G+SE +R FE A +P+IIFIDE+D + +R + E RR+
Sbjct: 254 FFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRV 313
Query: 438 VSQLLTLMDGMKK---SSHVIVMAATN 509
S+ L MDG + S V V+AATN
Sbjct: 314 KSEFLVQMDGSQNKFDSRRVFVLAATN 340
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
N + DDI G + E V LPL P F+ + P + +++ GPPGTGKTLIARA+
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAI 246
Query: 241 ANETGLSSF*LMDRRSCLSWR 303
A+E+ + F + WR
Sbjct: 247 ASESSSTFFTVSSTDLSSKWR 267
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 60.9 bits (141), Expect = 8e-10
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT-HGEVERRI 437
FF ++ ++ SK G+SE +R FE A +P+IIFIDE+D + +R + E RR+
Sbjct: 254 FFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRV 313
Query: 438 VSQLLTLMDGMKK---SSHVIVMAATN 509
S+ L MDG + S V V+AATN
Sbjct: 314 KSEFLVQMDGSQNKFDSRRVFVLAATN 340
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +1
Query: 61 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 240
N + DDI G + E V LPL P F+ + P + +++ GPPGTGKTLIARA+
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAI 246
Query: 241 ANETGLSSF*LMDRRSCLSWR 303
A+E+ + F + WR
Sbjct: 247 ASESSSTFFTVSSTDLSSKWR 267
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR-EKTHGEVERRI 437
FF G E L G+ +R F++A +P IIFIDE+D++ KR + +
Sbjct: 262 FFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSIHPYANQT 321
Query: 438 VSQLLTLMDGMKKSSHVIVMAATN 509
++QLL+ MDG ++ +IV+AATN
Sbjct: 322 INQLLSEMDGFTRNEGIIVIAATN 345
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/53 (43%), Positives = 38/53 (71%)
Frame = +1
Query: 109 QIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGLSSF 267
+++E+V+ L+ P + +G + P+G+L+ GPPGTGKTL+ARA+A E + F
Sbjct: 212 EVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFF 263
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 181 RGILMYGPPGTGKTLIARAVANETGL 258
R ++ YGPPGTGKTL A+++A +GL
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGL 368
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 261 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPA-IIFIDELDAIAPKREKTHGEVERRI 437
+ ++ G +I + L + S + K F+ A K+ I+FIDE DA KR K + R
Sbjct: 370 YAVLTGGDI-APLGRDGVSAIHKVFDWASKSRKGLIVFIDEADAFLQKRSKNGMSEDTRA 428
Query: 438 VSQLLTLMDGMKKSSHVIVMAA 503
G + ++V+A+
Sbjct: 429 ALNAFLFRTGEQSRKFMLVVAS 450
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 166 GVKPPRGILMYGPPGTGKTLIARAVANETGLS 261
GV RG L YGPPGTGK+ A+A+ G S
Sbjct: 193 GVPYRRGYLFYGPPGTGKSSFISALASHFGYS 224
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 166 GVKPPRGILMYGPPGTGKTLIARAVANETGLS 261
GV RG L YGPPGTGK+ A+A+ G S
Sbjct: 239 GVPYRRGYLFYGPPGTGKSSFISALASHFGYS 270
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 181 RGILMYGPPGTGKTLIARAVANETG 255
R +L+ GPP TGKT IA A++ E G
Sbjct: 83 RAVLIAGPPATGKTAIALAMSQELG 107
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 187 ILMYGPPGTGKTLIARAVANE 249
+L YGPPGTGKT A A +
Sbjct: 65 LLFYGPPGTGKTTTVLAAARQ 85
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 181 RGILMYGPPGTGKTLIARAVANETG 255
R +L+ G PG GKT IA A++ E G
Sbjct: 67 RALLVTGEPGAGKTAIAIAISKELG 91
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 103 LAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGL 258
++ + + L +H + K I V R IL+ GPPGTGKT + + +A +
Sbjct: 150 MSYVAALARLSEKHVNT-KIINVN--RLILLTGPPGTGKTSLCKGLAQHLSI 198
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 199 GPPGTGKTLIARAVANETG 255
GPPG GKT IA+A+A G
Sbjct: 336 GPPGIGKTSIAKAIAESMG 354
>AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 135 protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 255 PCFISNSTSNECFSGTRRPI 196
PCF+ NS +NEC G+R I
Sbjct: 5 PCFVCNSPANECHFGSRSQI 24
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 187 ILMYGPPGTGKTLIARAVANETGLSS 264
+L+ GP G GK+ +AR VA + G S+
Sbjct: 333 LLLSGPAGLGKSTLARIVARQAGYST 358
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 187 ILMYGPPGTGKTLIARAVANE 249
+L YGPPGTGKT A A +
Sbjct: 51 LLFYGPPGTGKTSAALAFCRQ 71
>U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical
protein T10H10.2 protein.
Length = 574
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -3
Query: 428 FHFTVGFLSLWCNSIEFINEDNSRRVLVGFLKRL 327
+ F FL + CN+ F+NED+++ L+ + R+
Sbjct: 529 YQFPAKFLCVDCNAKGFLNEDDTQPFLIDYYSRI 562
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 103 LAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVA 243
+ +KE + + L K+IG K + +GPPG GKT IA+++A
Sbjct: 483 MKDVKERIMEFIAVNLLRKSIGGKI---LCFHGPPGVGKTSIAKSIA 526
>Z73972-4|CAA98260.1| 666|Caenorhabditis elegans Hypothetical
protein F15H10.7 protein.
Length = 666
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 297 LAGESESNLRKAFEEADK---NSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG 467
L G+ + + K F+ +K +S I+F D RE G +E R+ + + DG
Sbjct: 379 LIGKVDDDFEKFFKNNEKRMEDSIIIVFSDHGHRYDKIRETVIGRIESRMPFHSIRIPDG 438
Query: 468 MKKSSHVIV 494
+KK IV
Sbjct: 439 IKKKYPQIV 447
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/92 (25%), Positives = 38/92 (41%)
Frame = +3
Query: 258 FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRI 437
F LIN PE + L S S + + + AD +S + D AP + ++
Sbjct: 157 FTDLINSPETLGNLTNTSVSAMSQQMDTADADSVNRMMQTFFD--APGEQVPEIQLALTC 214
Query: 438 VSQLLTLMDGMKKSSHVIVMAATNGRTPSTRR 533
SQ T ++ +++ H + A G RR
Sbjct: 215 SSQNATAVEILRRFGHGQSLLAQGGMNEVVRR 246
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 306 ESESNLRKAFEEADKNSPAIIFIDELDAI 392
++E +RK F++ DK+ I + EL A+
Sbjct: 276 KTEEEIRKVFQDLDKDGDGFISVAELQAV 304
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 190 LMYGPPGTGKTLIARAV 240
L+ GPPGTGKT+++ +
Sbjct: 464 LIQGPPGTGKTVVSATI 480
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 190 LMYGPPGTGKTLIARAV 240
L+ GPPGTGKT+++ +
Sbjct: 464 LIQGPPGTGKTVVSATI 480
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 178 PRGILMYGPPGTGKTLI 228
PRGI +YG G GKT++
Sbjct: 90 PRGIYLYGSVGCGKTML 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,085,769
Number of Sequences: 27780
Number of extensions: 309670
Number of successful extensions: 1239
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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