Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021360
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD...    31   1.5  
AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein.    29   7.9  
AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA...    29   7.9  

>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
            protein.
          Length = 2351

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +3

Query: 48   GTPTPLKSATRGSSPINFHGSISLXXXAPKPSAL*HPNMTRN-MTRLYFRPPLPKDSVSX 224
            G P+  K+ ++GSSP+ +    +     P   A   P +  N +T  Y R PLP+ S S 
Sbjct: 968  GAPSGSKTPSQGSSPLKYQTPPT--TYPPPIEAYQCPKINPNFLTPKYERSPLPRSSTSS 1025

Query: 225  PPS 233
             PS
Sbjct: 1026 FPS 1028


>AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein.
          Length = 2517

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 567 SRNISEFSTVKIVLPTCLCMEAKLHTISLGLLRPI*NHYK 686
           +RN+S FS V  V+   LC E  L  IS  L+R + N ++
Sbjct: 17  NRNVSNFSGVYSVIEDILCQEPSL--ISCSLVRELHNKFQ 54


>AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA
           protein.
          Length = 2517

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 567 SRNISEFSTVKIVLPTCLCMEAKLHTISLGLLRPI*NHYK 686
           +RN+S FS V  V+   LC E  L  IS  L+R + N ++
Sbjct: 17  NRNVSNFSGVYSVIEDILCQEPSL--ISCSLVRELHNKFQ 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,317,410
Number of Sequences: 53049
Number of extensions: 741474
Number of successful extensions: 2166
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2166
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)