Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021360
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AB011281-1|BAA24961.1|  254|Caenorhabditis elegans GAP-2-5 protein.    28   5.5  
AB011277-1|BAA24957.1|  269|Caenorhabditis elegans GAP-2-1 protein.    28   5.5  
Z72512-2|CAA96664.1|  322|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z73972-4|CAA98260.1|  666|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z73906-8|CAA98120.3|  511|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AC084153-13|AAK84583.1|  123|Caenorhabditis elegans Hypothetical...    27   9.6  
AC006625-6|AAN84837.1|  252|Caenorhabditis elegans Acyl coa dehy...    27   9.6  

>Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical
           protein C33A12.10 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 234 FLTDFLL*RILGTFLFSSLCRAYKRHPNH 320
           FLTDFL+ R+  T +F+S C +    PNH
Sbjct: 86  FLTDFLMTRLPSTGIFTSFCASIP--PNH 112


>Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical
           protein ZK899.8e protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 349 LNVSISMSTHSFPTRLKLSSKRTQMFVPXGGTLLSAYFQKLSIKSTKA 492
           +N  +S S+H+  TRL  S++         G LLS  F+   +K TK+
Sbjct: 59  MNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKS 106


>Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical
           protein ZK899.8a protein.
          Length = 1207

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 349 LNVSISMSTHSFPTRLKLSSKRTQMFVPXGGTLLSAYFQKLSIKSTKA 492
           +N  +S S+H+  TRL  S++         G LLS  F+   +K TK+
Sbjct: 218 MNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKS 265


>Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical
           protein ZK899.8e protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 349 LNVSISMSTHSFPTRLKLSSKRTQMFVPXGGTLLSAYFQKLSIKSTKA 492
           +N  +S S+H+  TRL  S++         G LLS  F+   +K TK+
Sbjct: 59  MNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKS 106


>Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical
           protein ZK899.8a protein.
          Length = 1207

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 349 LNVSISMSTHSFPTRLKLSSKRTQMFVPXGGTLLSAYFQKLSIKSTKA 492
           +N  +S S+H+  TRL  S++         G LLS  F+   +K TK+
Sbjct: 218 MNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKS 265


>Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical
           protein ZK899.8a protein.
          Length = 1207

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 349 LNVSISMSTHSFPTRLKLSSKRTQMFVPXGGTLLSAYFQKLSIKSTKA 492
           +N  +S S+H+  TRL  S++         G LLS  F+   +K TK+
Sbjct: 218 MNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKS 265


>AB011281-1|BAA24961.1|  254|Caenorhabditis elegans GAP-2-5 protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 349 LNVSISMSTHSFPTRLKLSSKRTQMFVPXGGTLLSAYFQKLSIKSTKA 492
           +N  +S S+H+  TRL  S++         G LLS  F+   +K TK+
Sbjct: 59  MNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKS 106


>AB011277-1|BAA24957.1|  269|Caenorhabditis elegans GAP-2-1 protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 349 LNVSISMSTHSFPTRLKLSSKRTQMFVPXGGTLLSAYFQKLSIKSTKA 492
           +N  +S S+H+  TRL  S++         G LLS  F+   +K TK+
Sbjct: 218 MNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKS 265


>Z72512-2|CAA96664.1|  322|Caenorhabditis elegans Hypothetical
           protein R07B5.4 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +3

Query: 237 LTDFLL*RILGTFLFSSLCRAYKRHPNHKVPFQPXLFVECINLNEYSQLSNKTQAV 404
           L DFL+ RI  T +F+S C  YK  P   +     LF  C+  +    L+   Q V
Sbjct: 83  LLDFLVVRIPLTSIFTSYCSLYK--PEVALKILTLLFTGCVYTSHLLTLAFCVQRV 136


>Z73972-4|CAA98260.1|  666|Caenorhabditis elegans Hypothetical
           protein F15H10.7 protein.
          Length = 666

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 678 GFRWDEANRERSYGVWPPYTNKLG 607
           G +W + +R+RSY  + P+  ++G
Sbjct: 476 GEKWTQTDRKRSYSYFDPFPKRIG 499


>Z73906-8|CAA98120.3|  511|Caenorhabditis elegans Hypothetical
           protein D2030.8 protein.
          Length = 511

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 545 IVLIFGPIKKYQRVFDSKDRPPNLFVYGGQTPYDLSRFASSHLKPLQI 688
           ++L FG  K Y+R    +D   +   + G  PY+LSRF+   L+ + +
Sbjct: 387 VLLFFG--KFYER--SQQDASVHERAFAGSLPYELSRFSHKDLENISV 430


>AC084153-13|AAK84583.1|  123|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.1 protein.
          Length = 123

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 380 AFQQDSSCHPSERKCSSRXXVHCCPHIF 463
           A  Q+S  H S   CS+R  V CC  +F
Sbjct: 19  ASTQESQDHNSTNNCSNRMKVLCCIAVF 46


>AC006625-6|AAN84837.1|  252|Caenorhabditis elegans Acyl coa
           dehydrogenase protein1, isoform b protein.
          Length = 252

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -3

Query: 357 YIQRKXRAEKELYDWDVVYRLDIEMKTEMCQGFVKGE 247
           Y+Q++ +  + L D+ V++ +  E     C GF   +
Sbjct: 213 YLQQREQFGQRLIDFQVIFEIGFEFLIHKCSGFTTSD 249


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,887,214
Number of Sequences: 27780
Number of extensions: 366270
Number of successful extensions: 946
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)