Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021358
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    65   2e-12
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    29   0.18 
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    28   0.24 
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    25   2.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.9  
AY748838-1|AAV28186.1|  155|Anopheles gambiae cytochrome P450 pr...    23   9.1  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    23   9.1  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +1

Query: 313 FRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTSF 492
           F+SG+++V+  T + +RGLD    +HV+NYD P    DY+HR GR GR+G+      TSF
Sbjct: 469 FKSGRMDVLIATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRIGRTGRVGNK--GRATSF 526


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -2

Query: 672 VDTTAAGNTGSSTCLSKSP 616
           VDTT++G+TG   CL+K+P
Sbjct: 325 VDTTSSGSTGILYCLAKNP 343


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = -2

Query: 672 VDTTAAGNTGSSTCLSKSP 616
           +DTT++G+TG   CL+K+P
Sbjct: 327 IDTTSSGSTGVLYCLAKNP 345


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 672 VDTTAAGNTGSSTCLSKSP 616
           +DTT+AG+     CL+K+P
Sbjct: 320 IDTTSAGSVAILYCLAKNP 338


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 434 TGAGARAGWDPRPDPTSPASWPGPAGRAGPE 526
           +G   R G D  P P      PGP G  G +
Sbjct: 602 SGLMGRPGNDGLPGPQGQRGLPGPQGEKGDQ 632



 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 470 PDPTSPASWPGPAGRAG 520
           P P  PA  PG  GR G
Sbjct: 163 PGPKGPAGHPGAPGRPG 179


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 440 AGARAGWDPRPDPTSPASWPGPAGRAGPEDRD 535
           AGA  G + RP    P    G  G  GP+  D
Sbjct: 400 AGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMD 431


>AY748838-1|AAV28186.1|  155|Anopheles gambiae cytochrome P450
           protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 100 PQKFLRLGKAHKPAE 144
           P++FL+ GK H PA+
Sbjct: 96  PERFLKDGKIHIPAQ 110


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 672 VDTTAAGNTGSSTCLSKSPA 613
           +DTT++   G   CL+K+P+
Sbjct: 326 IDTTSSSTFGILYCLAKNPS 345


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,046
Number of Sequences: 2352
Number of extensions: 15584
Number of successful extensions: 44
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)