Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021358
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 75 4e-14
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 75 4e-14
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 75 4e-14
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 72 4e-13
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 72 4e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 71 8e-13
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 71 1e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 71 1e-12
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 69 2e-12
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 69 3e-12
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 69 4e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 67 1e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 67 1e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 67 1e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 61 8e-10
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 60 1e-09
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 60 1e-09
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 60 1e-09
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 58 8e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 58 8e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 54 7e-08
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 53 2e-07
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 53 2e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 52 3e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 50 2e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 49 3e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 48 8e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 48 8e-06
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 46 3e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 42 3e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 41 0.001
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 40 0.001
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 40 0.001
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 40 0.001
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 40 0.002
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 39 0.004
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 39 0.004
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 38 0.007
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 38 0.007
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 37 0.012
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 37 0.016
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 36 0.036
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 36 0.036
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 33 0.19
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 33 0.19
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 33 0.25
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 33 0.25
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 31 0.78
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 31 0.78
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 31 0.78
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 31 0.78
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 0.78
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 26 1.1
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 30 1.4
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 30 1.4
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.8
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 30 1.8
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 30 1.8
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 27 2.3
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 27 2.3
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 27 2.3
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 27 2.3
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 27 2.3
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 27 2.3
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 29 2.4
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 29 3.1
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 3.1
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 3.1
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 4.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.1
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 28 5.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 7.2
U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal glan... 28 7.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 7.2
M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical pr... 28 7.2
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 7.2
AF106573-5|AAF02104.2| 358|Caenorhabditis elegans Seven tm rece... 28 7.2
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 28 7.2
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 28 7.2
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 27 9.6
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 27 9.6
AY494975-1|AAR87492.1| 486|Caenorhabditis elegans collagen/olfa... 27 9.6
AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin (col... 27 9.6
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 27 9.6
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/124 (27%), Positives = 66/124 (53%)
Frame = +1
Query: 94 HVPQKFLRLGKAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPEREQR*CINING 273
++ Q+ L + + K + L++++ + +E ++ + + R+Q ++I+G
Sbjct: 371 NIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHG 430
Query: 274 QMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAG 453
+ + E+FRSG+ ++ T + +RGLD HVINYD P + +Y+HR GR G
Sbjct: 431 DLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTG 490
Query: 454 RLGS 465
R G+
Sbjct: 491 RCGN 494
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/124 (27%), Positives = 66/124 (53%)
Frame = +1
Query: 94 HVPQKFLRLGKAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPEREQR*CINING 273
++ Q+ L + + K + L++++ + +E ++ + + R+Q ++I+G
Sbjct: 355 NIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHG 414
Query: 274 QMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAG 453
+ + E+FRSG+ ++ T + +RGLD HVINYD P + +Y+HR GR G
Sbjct: 415 DLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTG 474
Query: 454 RLGS 465
R G+
Sbjct: 475 RCGN 478
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/124 (27%), Positives = 66/124 (53%)
Frame = +1
Query: 94 HVPQKFLRLGKAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPEREQR*CINING 273
++ Q+ L + + K + L++++ + +E ++ + + R+Q ++I+G
Sbjct: 352 NIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHG 411
Query: 274 QMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAG 453
+ + E+FRSG+ ++ T + +RGLD HVINYD P + +Y+HR GR G
Sbjct: 412 DLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTG 471
Query: 454 RLGS 465
R G+
Sbjct: 472 RCGN 475
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 71.7 bits (168), Expect = 4e-13
Identities = 38/107 (35%), Positives = 55/107 (51%)
Frame = +1
Query: 178 RRPVMIFSNQTSGCDFVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIV 357
++ ++ + Q SI Q I I+G + + ++FRSG V+ T +V
Sbjct: 564 KKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVV 623
Query: 358 SRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTSFVA 498
RGLD HVINYD P + DYIHR GR GR+G+ TSF++
Sbjct: 624 ERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGN--SGRATSFIS 668
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 71.7 bits (168), Expect = 4e-13
Identities = 38/107 (35%), Positives = 55/107 (51%)
Frame = +1
Query: 178 RRPVMIFSNQTSGCDFVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIV 357
++ ++ + Q SI Q I I+G + + ++FRSG V+ T +V
Sbjct: 564 KKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVV 623
Query: 358 SRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTSFVA 498
RGLD HVINYD P + DYIHR GR GR+G+ TSF++
Sbjct: 624 ERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGN--SGRATSFIS 668
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.9 bits (166), Expect = 8e-13
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Frame = +1
Query: 46 ESLKMVRTSNIHRILPHVPQKFLRLGKAHKPAELLKLVQADQNE----------RRPVMI 195
E+ M+ I V Q+F R ++ K +LL+L+ D + + M+
Sbjct: 552 ENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMV 611
Query: 196 FSNQTSGCDFV-SIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLD 372
F +Q + D + SI Q I I+G + + FR+G V+ T + RGLD
Sbjct: 612 FVSQRAMADILASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLD 671
Query: 373 TTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTSFVA 498
HVINYD P + DYIHR GR GR+G+ TSF++
Sbjct: 672 IKGVDHVINYDMPDNIDDYIHRIGRTGRVGN--SGRATSFIS 711
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Frame = +1
Query: 46 ESLKMVRTSNIHRILPHVPQKFLRLGKAHKPAELLKLVQADQNE----------RRPVMI 195
E+ M+ I V Q+F R ++ K +LL+L+ D + + M+
Sbjct: 552 ENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMV 611
Query: 196 FSNQTSGCD-FVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLD 372
F +Q + D SI Q I I+G + + FR+G V+ T + RGLD
Sbjct: 612 FVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLD 671
Query: 373 TTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTSFVA 498
HVINYD P + DYIHR GR GR+G+ TSF++
Sbjct: 672 IKGVDHVINYDMPDNIDDYIHRIGRTGRVGN--SGRATSFIS 711
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase
protein 1 protein.
Length = 763
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Frame = +1
Query: 46 ESLKMVRTSNIHRILPHVPQKFLRLGKAHKPAELLKLVQADQNE----------RRPVMI 195
E+ M+ I V Q+F R ++ K +LL+L+ D + + M+
Sbjct: 552 ENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMV 611
Query: 196 FSNQTSGCD-FVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLD 372
F +Q + D SI Q I I+G + + FR+G V+ T + RGLD
Sbjct: 612 FVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLD 671
Query: 373 TTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTSFVA 498
HVINYD P + DYIHR GR GR+G+ TSF++
Sbjct: 672 IKGVDHVINYDMPDNIDDYIHRIGRTGRVGN--SGRATSFIS 711
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 69.3 bits (162), Expect = 2e-12
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +1
Query: 103 QKFLRLGKAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPEREQR*-CININGQM 279
Q +++L +A K LL L+ D E V+IF C+ + EQ I I+ QM
Sbjct: 260 QHYVKLKEAEKNRRLLNLL--DALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQM 317
Query: 280 PVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRL 459
+ +L +++ F+ + ++ TD+ RG+D R + V NYD P + Y+HR RAGR
Sbjct: 318 AQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRF 377
Query: 460 GS 465
G+
Sbjct: 378 GT 379
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 69.3 bits (162), Expect = 2e-12
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +1
Query: 103 QKFLRLGKAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPEREQR*-CININGQM 279
Q +++L +A K LL L+ D E V+IF C+ + EQ I I+ QM
Sbjct: 252 QHYVKLKEAEKNRRLLNLL--DALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQM 309
Query: 280 PVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRL 459
+ +L +++ F+ + ++ TD+ RG+D R + V NYD P + Y+HR RAGR
Sbjct: 310 AQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRF 369
Query: 460 GS 465
G+
Sbjct: 370 GT 371
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/124 (26%), Positives = 61/124 (49%)
Frame = +1
Query: 94 HVPQKFLRLGKAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPEREQR*CINING 273
++ QK + + + K + L+ L+ A + ++ + D R+ + I+G
Sbjct: 400 NIMQKIVWVEEDEKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHG 459
Query: 274 QMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAG 453
+ + ++FR+G ++ T + +RGLD HVINYD P +Y+HR GR G
Sbjct: 460 DLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTG 519
Query: 454 RLGS 465
R+G+
Sbjct: 520 RVGN 523
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 68.5 bits (160), Expect = 4e-12
Identities = 37/134 (27%), Positives = 66/134 (49%)
Frame = +1
Query: 61 VRTSNIHRILPHVPQKFLRLGKAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPE 240
V S+ ++ + ++ Q ++ + +K L+ L+ V + T+ V + +
Sbjct: 246 VSVSSRYKTVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQ 305
Query: 241 REQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHT 420
+ + ++GQM + +LG F+S ++ CTD+ +RGLD VINYD P +
Sbjct: 306 LGMQ-AVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQS 364
Query: 421 SDYIHRCGRAGRLG 462
DY+HR GR R G
Sbjct: 365 KDYVHRVGRTARAG 378
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 66.9 bits (156), Expect = 1e-11
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +1
Query: 181 RPVMIFSNQTSGCD-FVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIV 357
+ ++F +Q + D SI Q I I+G + + FR+G V+ T +
Sbjct: 818 KKTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVA 877
Query: 358 SRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTSFVA 498
RGLD HVINYD P + DYIHR GR GR+G+ TSF++
Sbjct: 878 ERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGN--AGRATSFIS 922
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 66.9 bits (156), Expect = 1e-11
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +1
Query: 181 RPVMIFSNQTSGCD-FVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIV 357
+ ++F +Q + D SI Q I I+G + + FR+G V+ T +
Sbjct: 818 KKTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVA 877
Query: 358 SRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTSFVA 498
RGLD HVINYD P + DYIHR GR GR+G+ TSF++
Sbjct: 878 ERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGN--AGRATSFIS 922
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 66.9 bits (156), Expect = 1e-11
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +1
Query: 181 RPVMIFSNQTSGCD-FVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIV 357
+ ++F +Q + D SI Q I I+G + + FR+G V+ T +
Sbjct: 818 KKTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVA 877
Query: 358 SRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTSFVA 498
RGLD HVINYD P + DYIHR GR GR+G+ TSF++
Sbjct: 878 ERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGN--AGRATSFIS 922
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 310 MFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
M RSG+V ++ TD+ SRG+D HV+NYDFP+ +Y+HR GR GR G
Sbjct: 383 MLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAG 433
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = +1
Query: 103 QKFLRLGKAHKPAELLKLVQ--ADQNERRPVMIFSNQTSGCDFVSIPEREQR*CI-NING 273
QK++ A K A L+ +V+ +++N + VMIF+ C ++ + +++
Sbjct: 310 QKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHS 369
Query: 274 QMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAG 453
Q+P + +L FRS + VI CTD+ SRGLD V+N++ P YIHR GR+
Sbjct: 370 QIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSA 429
Query: 454 RLG 462
R G
Sbjct: 430 RAG 432
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = +1
Query: 103 QKFLRLGKAHKPAELLKLVQ--ADQNERRPVMIFSNQTSGCDFVSIPEREQR*CI-NING 273
QK++ A K A L+ +V+ +++N + VMIF+ C ++ + +++
Sbjct: 310 QKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHS 369
Query: 274 QMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAG 453
Q+P + +L FRS + VI CTD+ SRGLD V+N++ P YIHR GR+
Sbjct: 370 QIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSA 429
Query: 454 RLG 462
R G
Sbjct: 430 RAG 432
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 62.1 bits (144), Expect = 4e-10
Identities = 38/141 (26%), Positives = 68/141 (48%)
Frame = +1
Query: 34 FVAAESLKMVRTSNIHRILPHVPQKFLRLGKAHKPAELLKLVQADQNERRPVMIFSNQTS 213
F+ SL++ NI +++ + + K K ELL + +Q E + ++ +
Sbjct: 334 FLNVGSLELAANHNITQVVDILEEH----AKQAKLMELLNHIM-NQKECKTIIFVETKRK 388
Query: 214 GCDFVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHV 393
+ R+ + I+G + + F++GK ++ TD+ +RGLD V
Sbjct: 389 ADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFV 448
Query: 394 INYDFPLHTSDYIHRCGRAGR 456
INYD+P ++ DY+HR GR GR
Sbjct: 449 INYDYPNNSEDYVHRIGRTGR 469
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 60.9 bits (141), Expect = 8e-10
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +1
Query: 124 KAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPERE-QR*CININGQMPVQLKLG 300
K H L + +Q +Q+ +IF N T + ++ E C I+ +M +
Sbjct: 267 KVHCLNTLFRKLQINQS-----IIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNR 321
Query: 301 KFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
F FR G + C+D+++RG+D + VIN+DFP + Y+HR GR+GR G
Sbjct: 322 VFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFG 375
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/62 (48%), Positives = 37/62 (59%)
Frame = +1
Query: 307 EMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVT 486
E FR G++ V+ CT+++ RGLD + VINYD P YIHR GR GR G G VT
Sbjct: 419 ERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGK-SGHAVT 477
Query: 487 SF 492
F
Sbjct: 478 YF 479
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +1
Query: 190 MIFSNQTSGCDFVSIPEREQR*CIN-INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRG 366
+IF N D ++ E + ++ ++G M + FRSG V+ TDI++RG
Sbjct: 272 VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARG 331
Query: 367 LDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
+D + VINYD P + +YIHR GR+GR G
Sbjct: 332 IDVQQVSLVINYDLPSNRENYIHRIGRSGRFG 363
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +1
Query: 190 MIFSNQTSGCDFVSIPEREQR*CIN-INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRG 366
+IF N D ++ E + ++ ++G M + FRSG V+ TDI++RG
Sbjct: 272 VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARG 331
Query: 367 LDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
+D + VINYD P + +YIHR GR+GR G
Sbjct: 332 IDVQQVSLVINYDLPSNRENYIHRIGRSGRFG 363
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 313 FRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
FRSG V+ TDI++RG+D + VINYD P + +YIHR GR+GR G
Sbjct: 27 FRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFG 76
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 190 MIFSNQTSGCDFVSIPEREQR*CIN-INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRG 366
++F N D+++ +E ++ ++G M + + + FR+G V+ TD+ +RG
Sbjct: 269 VLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARG 328
Query: 367 LDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
LD + VINYD P + YIHR GR+GR G
Sbjct: 329 LDVPQVSLVINYDLPNNRELYIHRIGRSGRFG 360
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 190 MIFSNQTSGCDFVSIPEREQR*CIN-INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRG 366
++F N D+++ +E ++ ++G M + + + FR+G V+ TD+ +RG
Sbjct: 269 VLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARG 328
Query: 367 LDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
LD + VINYD P + YIHR GR+GR G
Sbjct: 329 LDVPQVSLVINYDLPNNRELYIHRIGRSGRFG 360
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +1
Query: 313 FRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
F++G + V+ T + +RGLD V+NYD P H DY+HR GR GR G
Sbjct: 598 FKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAG 647
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +1
Query: 307 EMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
E FR + +V+ TD+ S+GLD HVIN+D P +Y+HR GR GR G
Sbjct: 485 EAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSG 536
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 55.6 bits (128), Expect = 3e-08
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Frame = +1
Query: 46 ESLKMVRTSNIHRILPHVPQKFLRL-GKAHKPAELLKLVQADQNERR-PVMIFSNQTSGC 219
E +K+V + R+ V +F G A K A+L ++++ + N + +IF + C
Sbjct: 602 EMIKIVLANG--RLSKRVNLEFFECKGLAEKNAKLREILKQNVNGKTLKTIIFVQKKDQC 659
Query: 220 DFVSIPEREQR*CIN-INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVI 396
D + ++G ++ F+S +VN++ TD++SRG+D + VI
Sbjct: 660 DACAAKLTSGGMLAQTLHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGIDVSDLDRVI 719
Query: 397 NYDFPLHTSD-----YIHRCGRAGRLGSPPGSHVTSFV 495
N+D P D +IHR GR GR G SFV
Sbjct: 720 NFDLPDGDPDQGADTFIHRAGRTGRTGRKENGLCVSFV 757
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = +1
Query: 151 KLVQADQNE-RRPVMIFSNQTSGCDFVS--IPEREQR*CININGQMPVQLKLGKFEMFRS 321
KLV+ +++ + P++IF NQ G D +S + + + + G+ Q + + +
Sbjct: 563 KLVEVLESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYA-LQALKE 621
Query: 322 GKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
G +++ TD+ RG+D V+NYD DY HR GR GR G
Sbjct: 622 GTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAG 668
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +1
Query: 145 LLKLVQADQNERRPVMIFSNQTSGCDFV-SIPEREQR*CININGQMPVQLKLGKFEMFRS 321
LL +N+ + VM+F + + F + C++I+G+ Q + F F
Sbjct: 303 LLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQ 362
Query: 322 GKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGR 456
+ ++ CTD+ +RGLD ++ YD +YIHR GR R
Sbjct: 363 AETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTAR 407
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 52.8 bits (121), Expect = 2e-07
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Frame = +1
Query: 7 EDLPETVNNFVAAESLKMVRTSNIHRILPHVPQKFLRLGKAHKPAELLKLVQADQN---- 174
+DLP+ V E M++ + QK L + + K + KL+ D+N
Sbjct: 940 DDLPKFVK-----EGYTMLQVDKFGTANEKIDQKILPVPRTEKRDAIYKLLGIDENTVTL 994
Query: 175 ------ERRPVMIFSNQTSGCD-FVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVN 333
E++ +IF N CD ++ I+++ + + + FR GK
Sbjct: 995 LPDAPIEKQKTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRGKYQ 1054
Query: 334 VISCTDIVSRGLDTTRTHHVINYDFPLHT--SDYIHRCGRAGRLG 462
+ +++ +RGL+ HV+NYD P +Y++R GR GR G
Sbjct: 1055 CMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAG 1099
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 52.8 bits (121), Expect = 2e-07
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Frame = +1
Query: 7 EDLPETVNNFVAAESLKMVRTSNIHRILPHVPQKFLRLGKAHKPAELLKLVQADQN---- 174
+DLP+ V E M++ + QK L + + K + KL+ D+N
Sbjct: 940 DDLPKFVK-----EGYTMLQVDKFGTANEKIDQKILPVPRTEKRDAIYKLLGIDENTVTL 994
Query: 175 ------ERRPVMIFSNQTSGCD-FVSIPEREQR*CININGQMPVQLKLGKFEMFRSGKVN 333
E++ +IF N CD ++ I+++ + + + FR GK
Sbjct: 995 LPDAPIEKQKTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRGKYQ 1054
Query: 334 VISCTDIVSRGLDTTRTHHVINYDFPLHT--SDYIHRCGRAGRLG 462
+ +++ +RGL+ HV+NYD P +Y++R GR GR G
Sbjct: 1055 CMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAG 1099
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 94 HVPQKFLRLGKAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPE-REQR*CININ 270
++ Q ++ + + HK L ++A + ++ V + S + + + + R + +
Sbjct: 294 NLKQSYVIVEEEHKINALWSFIEAHRKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLW 353
Query: 271 GQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRA 450
G M + ++ F F K V+ TD+ SRGLD VI D P DYIHR GR+
Sbjct: 354 GTMNQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRS 413
Query: 451 GRL 459
R+
Sbjct: 414 ARM 416
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 307 EMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
E F + V+ C+D+++RG D + VINY+ P ++HR GR GR G
Sbjct: 443 EKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAG 494
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 265 INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCG 444
++G + + E F+ G + + C+D+V+RGLD VI+ P S Y+HR G
Sbjct: 535 LHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARGLDVQGVPFVISVTLPDEKSMYVHRIG 594
Query: 445 RAGR 456
R GR
Sbjct: 595 RVGR 598
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = +1
Query: 265 INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCG 444
++ +M + +L E F K V+ TD+ +RGLD HVI+Y P YIHR G
Sbjct: 303 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSG 362
Query: 445 RAGR 456
R R
Sbjct: 363 RTAR 366
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = +1
Query: 265 INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCG 444
++ +M + +L E F K V+ TD+ +RGLD HVI+Y P YIHR G
Sbjct: 470 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSG 529
Query: 445 RAGR 456
R R
Sbjct: 530 RTAR 533
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +1
Query: 271 GQMPVQLKLGK----FEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHR 438
GQM L G+ F+ +++V+ TD+ SRGLD VIN + P YIHR
Sbjct: 445 GQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHR 504
Query: 439 CGRAGRLG 462
GR R G
Sbjct: 505 VGRTARAG 512
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = +1
Query: 169 QNERRPVMIFSNQTSGCDFVSIPER--EQR*CININGQMPVQLKLGKFEMFRSGKVNVIS 342
+ +++ ++ F + S F I ER +R ++G+ + + + F V+
Sbjct: 255 RTDKKILIFFPSCNSVRYFYKIFERCLGKRPLFAVHGKCSNPHRASQIKAFSDSTNGVMI 314
Query: 343 CTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
TD+++RG+D + VI +D P H+S ++HR GR R G
Sbjct: 315 STDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCG 354
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 47.6 bits (108), Expect = 8e-06
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 3/153 (1%)
Frame = +1
Query: 13 LPETVNNFVAA--ESLKMVRTSNIHRILPHVPQKFLRLGKAHKPAELLKLVQADQNERRP 186
LP+ + +F A +VR ++ + F K LL L + E +
Sbjct: 208 LPKMLVDFAKAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLCRRMDRENKQ 267
Query: 187 VMIFSNQTSGCDFV-SIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIVSR 363
++F ++V I R C + Q+ + + F + N++ TD+ +R
Sbjct: 268 TVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAAR 327
Query: 364 GLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
G+D VIN FP ++HR GR R G
Sbjct: 328 GVDIPLLDTVINLHFPPKAKLFVHRVGRVARAG 360
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 47.6 bits (108), Expect = 8e-06
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 3/153 (1%)
Frame = +1
Query: 13 LPETVNNFVAA--ESLKMVRTSNIHRILPHVPQKFLRLGKAHKPAELLKLVQADQNERRP 186
LP+ + +F A +VR ++ + F K LL L + E +
Sbjct: 208 LPKMLVDFAKAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLCRRMDRENKQ 267
Query: 187 VMIFSNQTSGCDFV-SIPEREQR*CININGQMPVQLKLGKFEMFRSGKVNVISCTDIVSR 363
++F ++V I R C + Q+ + + F + N++ TD+ +R
Sbjct: 268 TVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAAR 327
Query: 364 GLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
G+D VIN FP ++HR GR R G
Sbjct: 328 GVDIPLLDTVINLHFPPKAKLFVHRVGRVARAG 360
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +1
Query: 190 MIFSNQTSGCDFVSIPEREQR*CIN-INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRG 366
++F +Q S C+ ++ + + ++ M + + + R+ +V ++ +D+ +RG
Sbjct: 263 LVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARG 322
Query: 367 LDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVT 486
+D + V+N D + Y HR GRA R G+ G+ VT
Sbjct: 323 IDADNVNLVVNIDAAANEETYFHRIGRAARFGA-HGAAVT 361
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +1
Query: 190 MIFSNQTSGCDFVSIPEREQR*CIN-INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRG 366
++F +Q S C+ ++ + + ++ M + + + R+ +V ++ +D+ +RG
Sbjct: 263 LVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARG 322
Query: 367 LDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVT 486
+D + V+N D + Y HR GRA R G+ G+ VT
Sbjct: 323 IDADNVNLVVNIDAAANEETYFHRIGRAARFGA-HGAAVT 361
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 325 KVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
K ++ TD+ +RGLD + VIN+D ++HR GR GR G
Sbjct: 560 KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAG 605
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 355 VSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGR 456
VSRG+D +V+N+DFP T YIHR GR R
Sbjct: 368 VSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTAR 401
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 355 VSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGR 456
VSRG+D +V+N+DFP T YIHR GR R
Sbjct: 435 VSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTAR 468
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Frame = +1
Query: 265 INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSD------ 426
++G M V + F+ G V+ T++ +RG+D + VINYD P+ +D
Sbjct: 485 LHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMV 544
Query: 427 -----------YIHRCGRAGRLG 462
Y+HR GR GR G
Sbjct: 545 VDGFTQPDCETYLHRIGRTGRFG 567
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Frame = +1
Query: 265 INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSD------ 426
++G M V + F+ G V+ T++ +RG+D + VINYD P+ +D
Sbjct: 510 LHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMV 569
Query: 427 -----------YIHRCGRAGRLG 462
Y+HR GR GR G
Sbjct: 570 VDGFTQPDCETYLHRIGRTGRFG 592
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Frame = +1
Query: 265 INGQMPVQLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSD------ 426
++G M V + F+ G V+ T++ +RG+D + VINYD P+ +D
Sbjct: 894 LHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMV 953
Query: 427 -----------YIHRCGRAGRLG 462
Y+HR GR GR G
Sbjct: 954 VDGFTQPDCETYLHRIGRTGRFG 976
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 325 KVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
K++ + CT+I++RG+D + H I + Y HR GR GR G
Sbjct: 426 KIHGVVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGRDG 471
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 298 GKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSP 468
G + + SGK+ VI T G+D VI++ P +Y GRAGR G P
Sbjct: 350 GAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQP 406
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 298 GKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSP 468
G + + SGK+ VI T G+D VI++ P +Y GRAGR G P
Sbjct: 373 GAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQP 429
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 313 FRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGS 465
F ++N + T ++ G+D + + VI +D PL Y+ GRA R GS
Sbjct: 449 FHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAGS 499
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 286 QLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGS 465
Q ++ K +MF G++ ++ T + GLD VI Y++ + ++ R GR L S
Sbjct: 753 QKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGRGRALNS 812
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 286 QLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGS 465
Q ++ K +MF G++ ++ T + GLD VI Y++ + ++ R GR L S
Sbjct: 753 QKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGRGRALNS 812
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 313 FRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSP 468
F K+ I T G+D +VI+Y P + Y GRAGR GSP
Sbjct: 492 FMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGRAGRDGSP 543
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 328 VNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
++ + CT+I+SRG+D + I + Y+HR GR GR G
Sbjct: 425 IHGVVCTNIMSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDG 469
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 313 FRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGS 465
F S V+ TD+++RG++ R +INYD + +Y+ R GR G GS
Sbjct: 273 FNSRNTRVLVTTDLMARGMNI-RKSLIINYDVSGNMENYMLRNGRQGNFGS 322
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 286 QLKLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRA 450
Q ++ K +MF G+ ++ T + GLD VI Y++ + + ++ R GRA
Sbjct: 335 QKQMEKLKMFADGENQILVSTSVAEEGLDIPECSLVIKYNYATNETAHVQRRGRA 389
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 325 KVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPPGSHVTS 489
K++ + CT+I++RG+D + H I + Y HR GR G G ++ S
Sbjct: 273 KIHGVVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVSISGFLFGFNIGS 327
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 319 SGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSP 468
+ K +VI T G+D VI+Y P Y GRAGR G P
Sbjct: 517 ANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMP 566
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 374 VSNPRETISVHEMTLTFPDLNISNFPNFSCTG 279
V+ PR TI T PDLN P FSC G
Sbjct: 9 VAPPRRTIQFGGYTFVEPDLNF-KAPIFSCCG 39
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 319 SGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSP 468
+ K +VI T G+D VI+Y P Y GRAGR G P
Sbjct: 517 ANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMP 566
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 374 VSNPRETISVHEMTLTFPDLNISNFPNFSCTG 279
V+ PR TI T PDLN P FSC G
Sbjct: 9 VAPPRRTIQFGGYTFVEPDLNF-KAPIFSCCG 39
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 434 TGAGARAGWDPRPDPTSPASWPGPAGRAGPEDRD 535
TGAGA G P PA PGPAG GP D
Sbjct: 102 TGAGADIGPTCCPCQQGPAGPPGPAGDTGPNGND 135
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 434 TGAGARAGWDPRPDPTSPASWPGPAGRAGPEDRD 535
TGAGA G P PA PGPAG GP D
Sbjct: 102 TGAGADIGPTCCPCQQGPAGPPGPAGDTGPNGND 135
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +2
Query: 428 TSTGAGARAGWDPRPDPTSPASWPGPAGRAGPEDRDLGQANSDLP 562
T G RAG RP P PGPAG G + GQ S LP
Sbjct: 265 TEVGPAGRAGAPGRP---GPPGQPGPAGPPGENGKGGGQGPSGLP 306
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +2
Query: 428 TSTGAGARAGWDPRPDPTSPASWPGPAGRAGPEDRDLGQANSDLP 562
T G RAG RP P PGPAG G + GQ S LP
Sbjct: 246 TEVGPAGRAGAPGRP---GPPGQPGPAGPPGENGKGGGQGPSGLP 287
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPE 526
GA + G D +P +P + PGPAG AGP+
Sbjct: 199 GAPGQPGQDAPSEPITPGA-PGPAGPAGPQ 227
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPE 526
GA + G D +P +P + PGPAG AGP+
Sbjct: 199 GAPGQPGQDAPSEPITPGA-PGPAGPAGPQ 227
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPE 526
GA + G D +P +P + PGPAG AGP+
Sbjct: 199 GAPGQPGQDAPSEPITPGA-PGPAGPAGPQ 227
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical protein
M03C11.8 protein.
Length = 989
Score = 31.1 bits (67), Expect = 0.78
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Frame = +1
Query: 124 KAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPEREQR*CIN-INGQMPV---QL 291
K+ K +L ++ Q + V+IFS TS D + + + ++GQ PV Q
Sbjct: 751 KSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQE 810
Query: 292 KLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPP 471
+ +F + + V ++S T G++ T +H+I +D + + R R+G
Sbjct: 811 MINEFNLSKDLFVFLLS-TRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEK 869
Query: 472 GSHVTSFVA 498
HVT V+
Sbjct: 870 PVHVTRLVS 878
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPE 526
GA + G D +P +P + PGPAG AGP+
Sbjct: 199 GAPGQPGQDAPSEPITPGA-PGPAGPAGPQ 227
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPE 526
GA + G D +P +P + PGPAG AGP+
Sbjct: 199 GAPGQPGQDAPSEPITPGA-PGPAGPAGPQ 227
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 31.1 bits (67), Expect = 0.78
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Frame = +1
Query: 124 KAHKPAELLKLVQADQNERRPVMIFSNQTSGCDFVSIPEREQR*CIN-INGQMPV---QL 291
K+ K +L ++ Q + V+IFS TS D + + + ++GQ PV Q
Sbjct: 751 KSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQE 810
Query: 292 KLGKFEMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLGSPP 471
+ +F + + V ++S T G++ T +H+I +D + + R R+G
Sbjct: 811 MINEFNLSKDLFVFLLS-TRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEK 869
Query: 472 GSHVTSFVA 498
HVT V+
Sbjct: 870 PVHVTRLVS 878
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 458 WDPRPDPTSPASWPGPAGRAGPEDRD 535
+D P P PA PGPAG GP D
Sbjct: 173 FDCPPGPAGPAGGPGPAGPPGPAGAD 198
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 25.8 bits (54), Expect(2) = 1.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 470 PDPTSPASWPGPAGRAGP 523
P T AS PGP G AGP
Sbjct: 193 PGQTGGASLPGPPGPAGP 210
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 497 PGPAGRAGPEDRDLGQANSDLPHVNANIKRVIREGLSG*AG 619
PGPAG GP + N+ P + V G G AG
Sbjct: 205 PGPAGPPGPSGQPGSNGNAGAPGAPGQVVDV--PGTPGPAG 243
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 434 TGAGARAGWDPRPDPTSPASWPGPA-GRAGPEDRDLG 541
TG G + P P+ A PGPA G GP+ +DLG
Sbjct: 291 TGQGPLGNFSPNPN-AGAAPNPGPAAGAGGPDGQDLG 326
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 434 TGAGARAGWDPRPDPTSPASWPGPA-GRAGPEDRDLG 541
TG G + P P+ A PGPA G GP+ +DLG
Sbjct: 289 TGQGPLGNFSPNPN-AGAAPNPGPAAGAGGPDGQDLG 324
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAG 520
GA ++G P P PA PGPAG+ G
Sbjct: 194 GAPGQSGGAALPGPPGPAGPPGPAGQPG 221
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAG 520
GA ++G P P PA PGPAG+ G
Sbjct: 194 GAPGQSGGAALPGPPGPAGPPGPAGQPG 221
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAG 520
GA ++G P P PA PGPAG+ G
Sbjct: 194 GAPGQSGGAALPGPPGPAGPPGPAGQPG 221
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAG 520
GA ++G P P PA PGPAG+ G
Sbjct: 194 GAPGQSGGAALPGPPGPAGPPGPAGQPG 221
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 27.5 bits (58), Expect(2) = 2.3
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 485 PASWPGPAGRAGPEDRDLGQANSDLPHVNANIKRVIREGLSG*AG 619
PA PGPAG AGP+ + + P N G G AG
Sbjct: 220 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAG 264
Score = 20.6 bits (41), Expect(2) = 2.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPA 508
GA + G P PA+ P PA
Sbjct: 189 GADGQPGAPGNDGPDGPAATPAPA 212
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 27.5 bits (58), Expect(2) = 2.3
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 485 PASWPGPAGRAGPEDRDLGQANSDLPHVNANIKRVIREGLSG*AG 619
PA PGPAG AGP+ + + P N G G AG
Sbjct: 158 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAG 202
Score = 20.6 bits (41), Expect(2) = 2.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPA 508
GA + G P PA+ P PA
Sbjct: 127 GADGQPGAPGNDGPDGPAATPAPA 150
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 27.5 bits (58), Expect(2) = 2.3
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 485 PASWPGPAGRAGPEDRDLGQANSDLPHVNANIKRVIREGLSG*AG 619
PA PGPAG AGP+ + + P N G G AG
Sbjct: 158 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAG 202
Score = 20.6 bits (41), Expect(2) = 2.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPA 508
GA + G P PA+ P PA
Sbjct: 127 GADGQPGAPGNDGPDGPAATPAPA 150
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 27.5 bits (58), Expect(2) = 2.3
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 485 PASWPGPAGRAGPEDRDLGQANSDLPHVNANIKRVIREGLSG*AG 619
PA PGPAG AGP+ + + P N G G AG
Sbjct: 158 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAG 202
Score = 20.6 bits (41), Expect(2) = 2.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPA 508
GA + G P PA+ P PA
Sbjct: 127 GADGQPGAPGNDGPDGPAATPAPA 150
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 27.5 bits (58), Expect(2) = 2.3
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 485 PASWPGPAGRAGPEDRDLGQANSDLPHVNANIKRVIREGLSG*AG 619
PA PGPAG AGP+ + + P N G G AG
Sbjct: 157 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAG 201
Score = 20.6 bits (41), Expect(2) = 2.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPA 508
GA + G P PA+ P PA
Sbjct: 126 GADGQPGAPGNDGPDGPAATPAPA 149
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 27.5 bits (58), Expect(2) = 2.3
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 485 PASWPGPAGRAGPEDRDLGQANSDLPHVNANIKRVIREGLSG*AG 619
PA PGPAG AGP+ + + P N G G AG
Sbjct: 157 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAG 201
Score = 20.6 bits (41), Expect(2) = 2.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPA 508
GA + G P PA+ P PA
Sbjct: 126 GADGQPGAPGNDGPDGPAATPAPA 149
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPEDRDLGQANSDLP 562
G AG P P P PGPAG AG D G D P
Sbjct: 173 GPDGEAGSPAAPSPPGPPGPPGPAGPAG-NDGAAGTPGPDGP 213
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 467 RPDPTSPASWPGPAGRAGPEDRDLGQANS 553
+P P P PGP G AGP D G+A S
Sbjct: 153 QPCPAGPPGPPGPDGPAGPAGPD-GEAGS 180
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 464 PRPDPTSPASWPGPAGRAGPE 526
P P PA PGPAG GP+
Sbjct: 220 PEPAGPGPAGPPGPAGPPGPD 240
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical
protein C50B6.4 protein.
Length = 291
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGP 523
GA AG D +P PGPAG AGP
Sbjct: 145 GAPGPAGPDGQPGQDGQGGQPGPAGPAGP 173
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPE 526
GA G D +P PA PG G AGPE
Sbjct: 151 GAPGAPGPDGQPGQDGPAGQPGAPGPAGPE 180
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 416 TRLTTSTGAGARAGWDPRPDPTSPASWPGPAGRAGP--EDRDLGQANSD 556
T L + GA G P A PG AG AGP D GQA D
Sbjct: 206 TGLPGAPGAPGPQGPSGNPGQDGAAGAPGQAGPAGPAGPDGQPGQAGQD 254
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGP 523
GA AG D +P PGPAG AGP
Sbjct: 145 GAPGPAGPDGQPGQDGQGGQPGPAGPAGP 173
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +2
Query: 431 STGAGARAGWDPRPDPTSPASWPGPAGRAGPEDRDLGQANSD 556
S G AG P P PG G AG +D GQ SD
Sbjct: 223 SAGGPGEAGAPGAPGPDGQPGQPGQDGEAGAPGQD-GQPGSD 263
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAG 520
G G R G RP P PA PG AG G
Sbjct: 169 GMGGRPGNMGRPGPPGPAGDPGQAGSKG 196
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPE 526
GAG + +P P PA PGPAG AG +
Sbjct: 225 GAGGTTSTN-QPGPPGPAGPPGPAGPAGED 253
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPE 526
G+ + G D + +P +P + PGPAG GP+
Sbjct: 204 GSPGKPGEDGKSEPITPGA-PGPAGPPGPQ 232
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAG 520
GA ++G P P PA PGP+G+ G
Sbjct: 195 GAPGQSGGASLPGPPGPAGPPGPSGQPG 222
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 467 RPDPTSPASWPGPAGRAGPEDRDLGQANS 553
+P P P PGP G AGP D G+A S
Sbjct: 152 KPCPAGPPGPPGPDGPAGPAGPD-GEAGS 179
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPEDRDLGQANSDLP 562
G AG P P P PGP+G AGP D G A + P
Sbjct: 172 GPDGEAGSPAAPSPPGP---PGPSGPAGPAGND-GAAGTPGP 209
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 464 PRPDPTSPASWPGPAGRAGPE 526
P P PA PGPAG GP+
Sbjct: 219 PEPAAPGPAGPPGPAGPPGPD 239
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 464 PRPDPTSPASWPGPAGRAGPEDRD 535
P P P PGPAG AGPE +D
Sbjct: 171 PNGHPGQPGR-PGPAGPAGPEGKD 193
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 470 PDPTSPASWPGPAGRAGPEDRDLGQANS 553
P P PA GPAG GP+ R GQ S
Sbjct: 151 PGPAGPAGSAGPAGPKGPDGRP-GQPGS 177
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPEDRDLGQANSD 556
G R G D P PGP G+ GP+ R G+ +D
Sbjct: 196 GGLGRTGHDGNPGHPGEMGAPGPQGKQGPDGRQ-GEKGAD 234
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGP 523
GA AG D P P P GP G AGP
Sbjct: 171 GAPGDAGKDGPPGPPGPDGDSGPNGEAGP 199
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPEDRDLGQANSD 556
GA + G + +P PA PGP G GP D G A SD
Sbjct: 204 GAPGKDGEKGKGEP-GPAGPPGPPGPGGPPG-DAGGAGSD 241
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPEDRDLGQANSDLP 562
G AG D P P P G G AGP+ + LP
Sbjct: 233 GDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQPGSPGGPGLP 274
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 470 PDPTSPASWPGPAGRAGPEDRDLGQANSD 556
P P PA PGP G GP+ D G + D
Sbjct: 158 PGPPGPAGPPGPKGLPGPQG-DAGTSGQD 185
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 307 EMFRSGKVNVISCTDIVSRGLDTTRTHHVINYDFPLHTSDYIHRCGRAGRLG 462
E + + ++ V++ T G+D VI++ + + Y GRAGR G
Sbjct: 458 EKWMNNEIPVVAATVAFGMGIDKPDVRAVIHWSPSQNLAGYYQEAGRAGRDG 509
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAG 520
G R+G P P PA PGP+G+ G
Sbjct: 192 GQPGRSGGASLPGPPGPAGPPGPSGQPG 219
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 470 PDPTSPASWPGPAGRAG 520
P P PA PGPAG AG
Sbjct: 241 PGPPGPAGPPGPAGNAG 257
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 452 AGWDPRPDPTSPASWPGPAGRAGPE 526
AG + P P P PGPAG AGP+
Sbjct: 229 AGGEAGPGPAGP---PGPAGPAGPD 250
>U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 2 protein.
Length = 249
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 122 PRRKNFCGTCGNIRCILEVLTIFSDSAATKLLTVSGRSSC 3
PR FCG+ G+ T+ S + ++ +GRS C
Sbjct: 180 PRTCGFCGSSGSSSTTRSSATVSSGTCVDRVNPATGRSDC 219
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +2
Query: 440 AGARAGWDPRPDPTSPASW--PGPAGRAGP 523
AG G P+ P P PGPAGR GP
Sbjct: 149 AGPAGGPGPKGPPGPPGGHGEPGPAGRGGP 178
>M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical
protein B0303.7 protein.
Length = 493
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 122 PRRKNFCGTCGNIRCILEVL--TIFSDSAATKLLTVSGR 12
PR+ N CGT GN I E + + FS SAA L + R
Sbjct: 10 PRKPNICGTSGNSNGINENIDTSTFSVSAAKALFESAKR 48
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 458 WDPRPDPTSPASWPGPAGRAGPE 526
+D P P P PGP G GPE
Sbjct: 160 FDCPPGPAGPPGGPGPPGPPGPE 182
>AF106573-5|AAF02104.2| 358|Caenorhabditis elegans Seven tm
receptor protein 79 protein.
Length = 358
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 344 HEMTLTFPDLNISNFPNFSCTGIWPLMLMHQRC 246
HE TL L ++N NF C G+W L+ + C
Sbjct: 74 HEATLFI--LTVANRFNFPCLGVWMLLATNWIC 104
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = -2
Query: 255 STLFSFRNRHEVAARRLIAEDHHRSPLVLIRLDKFEEFRGLVRLPET*EFLRHMW*YPMY 76
++L++ R RH L E H +S + + +FE+FR LV L F+ H P Y
Sbjct: 129 ASLYTLR-RHLSQQHELPIEIHLQS---FVNIGEFEKFRHLVELASGCRFMMHTK-QPKY 183
Query: 75 IRSSNHFQ*FSRYKIIDSFRKVLVP 1
R H S +K++ +K +P
Sbjct: 184 RRQVMHCS-KSEHKLVLQTQKHRLP 207
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGR---AGPEDRDLGQANSD 556
G AG P P PA PGP G+ AG +D G A +D
Sbjct: 221 GPNGEAGAGSGPGPEGPAGPPGPNGKDGEAGAPGKD-GDAGAD 262
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 80 IGYYHMCRRNSYVSGRRTSPRNSSNLSKRIR 172
+GY+H R+SY G +S SSN ++ R
Sbjct: 430 VGYHHQEHRSSYGGGGSSSNGGSSNRRRQTR 460
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 80 IGYYHMCRRNSYVSGRRTSPRNSSNLSKRIR 172
+GY+H R+SY G +S SSN ++ R
Sbjct: 538 VGYHHQEHRSSYGGGGSSSNGGSSNRRRQTR 568
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAGPEDRD 535
G G + G PD +PG G GPE RD
Sbjct: 452 GPGGQGGRGQGPDFGPQDDFPGRRGSGGPEGRD 484
>AY494975-1|AAR87492.1| 486|Caenorhabditis elegans
collagen/olfactomedin domain containingprotein 2
protein.
Length = 486
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 467 RPDPTSPASWPGPAGRAGPEDR 532
+P P P PG +G AGP+ R
Sbjct: 93 KPGPVGPVGPPGKSGPAGPQGR 114
>AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin
(collagen plus olfactomedin)family protein 2 protein.
Length = 486
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 467 RPDPTSPASWPGPAGRAGPEDR 532
+P P P PG +G AGP+ R
Sbjct: 93 KPGPVGPVGPPGKSGPAGPQGR 114
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 437 GAGARAGWDPRPDPTSPASWPGPAGRAG 520
G R G D P P P+ PGP G+ G
Sbjct: 161 GNPGRNGEDGAPGPQGPSGPPGPPGQPG 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,670,557
Number of Sequences: 27780
Number of extensions: 345259
Number of successful extensions: 2028
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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