Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021357
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical pr...    51   7e-07
Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical pr...    51   7e-07
AC024882-6|AAF60925.2|  340|Caenorhabditis elegans Seven tm rece...    28   5.5  
Z73976-5|CAA98282.1|  283|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AC024882-3|AAF60934.1|  340|Caenorhabditis elegans Seven tm rece...    27   9.6  

>Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +1

Query: 88  LKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLP 192
           LK FV +C+  P +LH P+  FFKDYL+SLG +LP
Sbjct: 7   LKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLP 41



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +2

Query: 509 LFAKRGQVYLKLNKPNACIKDCTHALELNCDSAP----TNSEGEHIGSWVNFEESSHDLC 676
           L AKR  V LKL +P A I DC  A+ +N DSA            +G WV   E+  DL 
Sbjct: 151 LHAKRANVLLKLKRPVAAIADCDKAISINPDSAQGYKFRGRANRLLGKWV---EAKTDLA 207

Query: 677 ESLKI 691
            + K+
Sbjct: 208 TACKL 212



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +3

Query: 306 LDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQKYDEAINLYTAAI 485
           +D EGVI P++   +  MGD                   A  AFS   +D A+  +TAAI
Sbjct: 84  IDNEGVIEPEEA-VALPMGDSAKEATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAAI 142

Query: 486 QLNPQSA 506
           + NP SA
Sbjct: 143 EANPGSA 149


>Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +1

Query: 88  LKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLP 192
           LK FV +C+  P +LH P+  FFKDYL+SLG +LP
Sbjct: 7   LKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLP 41



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +2

Query: 509 LFAKRGQVYLKLNKPNACIKDCTHALELNCDSAP----TNSEGEHIGSWVNFEESSHDLC 676
           L AKR  V LKL +P A I DC  A+ +N DSA            +G WV   E+  DL 
Sbjct: 151 LHAKRANVLLKLKRPVAAIADCDKAISINPDSAQGYKFRGRANRLLGKWV---EAKTDLA 207

Query: 677 ESLKI 691
            + K+
Sbjct: 208 TACKL 212



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +3

Query: 306 LDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQKYDEAINLYTAAI 485
           +D EGVI P++   +  MGD                   A  AFS   +D A+  +TAAI
Sbjct: 84  IDNEGVIEPEEA-VALPMGDSAKEATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAAI 142

Query: 486 QLNPQSA 506
           + NP SA
Sbjct: 143 EANPGSA 149


>AC024882-6|AAF60925.2|  340|Caenorhabditis elegans Seven tm
           receptor protein 153 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -1

Query: 270 MTIPLFFIARFFITSSRKIFGTKSSGRQ*YTKRYQIILKK 151
           M IP F I  F   S +KI    + G   YTKR Q+ L K
Sbjct: 212 MIIPFFIILIFGYRSYKKISKLMAQGECDYTKRLQMQLYK 251


>Z73976-5|CAA98282.1|  283|Caenorhabditis elegans Hypothetical
           protein T07C12.9 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 114 NTAATITPSTIGVF*GLSDISWCIIADRYFWC 209
           NTA  + P    ++ G+ + +WC    R F C
Sbjct: 208 NTAGAVKPGGYLIYGGIFEETWCSFGGRKFTC 239


>AC024882-3|AAF60934.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 155 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 270 MTIPLFFIARFFITSSRKIFGTKSSGRQ*YTKRYQIILKK 151
           M IP+  I  F   + RK+    + G+  Y+KR Q+ L K
Sbjct: 212 MVIPILLIVFFGTKTYRKVKNLTTHGKSEYSKRLQMQLYK 251


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,441,134
Number of Sequences: 27780
Number of extensions: 282947
Number of successful extensions: 775
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)