Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021357
(693 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 51 6e-07
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 51 8e-07
At5g43120.1 68418.m05264 tetratricopeptide repeat (TPR)-containi... 40 0.002
At1g68185.1 68414.m07789 ubiquitin-related similar to ubiquitin-... 35 0.059
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 34 0.10
At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containi... 34 0.10
At2g42810.1 68415.m05300 serine/threonine protein phosphatase, p... 32 0.31
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 31 0.55
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 31 0.55
At4g12400.1 68417.m01960 stress-inducible protein, putative simi... 31 0.73
At5g51420.1 68418.m06375 long-chain-alcohol O-fatty-acyltransfer... 31 0.96
At1g66550.1 68414.m07561 WRKY family transcription factor simila... 29 2.9
At4g23570.2 68417.m03396 phosphatase-related low similarity to p... 29 3.9
At4g23570.1 68417.m03395 phosphatase-related low similarity to p... 29 3.9
At4g11260.1 68417.m01822 phosphatase-related low similarity to p... 29 3.9
At1g61440.1 68414.m06923 S-locus protein kinase, putative contai... 29 3.9
At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOA... 28 6.8
At1g66560.1 68414.m07562 WRKY family transcription factor 28 6.8
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +1
Query: 67 NAEQLDQLKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPT 195
++ +L +LK F++ CK+ P LL P L+FF+DYL SLG +PT
Sbjct: 2 DSTKLSELKVFIDQCKSDPSLLTTPSLSFFRDYLESLGAKIPT 44
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 485 TIKSTECFLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAP-TNSEG---EHIGSWVNF 652
T+ T ++ R VY+KL KPNA I+D ALE+N DSA S G +G W
Sbjct: 151 TLNPTSAIMYGNRASVYIKLKKPNAAIRDANAALEINPDSAKGYKSRGMARAMLGEWAEA 210
Query: 653 EESSH 667
+ H
Sbjct: 211 AKDLH 215
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/75 (34%), Positives = 34/75 (45%)
Frame = +3
Query: 306 LDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQKYDEAINLYTAAI 485
+++EG D Q MGD + AM A SE +DEAI T AI
Sbjct: 91 VELEGDTVEPDNDPPQKMGDSSVEVTDENREAAQEAKGKAMEALSEGNFDEAIEHLTRAI 150
Query: 486 QLNPQSAFCLLNGDR 530
LNP SA ++ G+R
Sbjct: 151 TLNPTSA--IMYGNR 163
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 67 NAEQLDQLKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATFGAKDFTAAGDKKSS 246
+A Q+ +L+ FVE K P +LH P L FFK+YL SLG +P +D+ + K S
Sbjct: 3 DAIQVAELRRFVEQLKLNPSILHDPSLVFFKEYLRSLGAQVPKIEKTERDYEDKAETKPS 62
Query: 247 NEEK 258
K
Sbjct: 63 FSPK 66
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 488 IKSTECFLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAP-TNSEGEHIGSWVNFEESS 664
+ T L+A R V+LK+ KPNA I+D AL+ N DSA S G +EE++
Sbjct: 141 LNPTSAILYATRASVFLKVKKPNAAIRDANVALQFNSDSAKGYKSRGMAKAMLGQWEEAA 200
Query: 665 HDLCESLKI 691
DL + K+
Sbjct: 201 ADLHVASKL 209
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +3
Query: 306 LDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQKYDEAINLYTAAI 485
LD V+ PD + Q MGDP AM A S+ ++DEAI T A+
Sbjct: 81 LDNSDVVEPDN-EPPQPMGDPTAEVTDENRDDAQSEKSKAMEAISDGRFDEAIEHLTKAV 139
Query: 486 QLNPQSA 506
LNP SA
Sbjct: 140 MLNPTSA 146
>At5g43120.1 68418.m05264 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 588
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 476 CSHTIKSTECFLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAPTNSEGEHI 634
C ++ L+++RG+ YL L +A I DCT AL C S P NS G+ +
Sbjct: 454 CPLKLRRKRMNLYSERGECYLLLGDVDAAISDCTRAL---CLSEPVNSHGKSL 503
>At1g68185.1 68414.m07789 ubiquitin-related similar to
ubiquitin-like protein smt3/pmt3 SP:O13351 from [Fission
yeast]
Length = 215
Score = 34.7 bits (76), Expect = 0.059
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 426 MRAFSEQKYDEAINLYTAAIQLNPQSAFCLLNGDR 530
+R F+++K++ I LYT +L+PQ+ + +GD+
Sbjct: 156 LRVFADEKFERVIKLYTDKAKLDPQNLVFIFDGDK 190
>At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 277
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 503 CFLFAKRGQVYLKLNKPNACIKDCTHALELN 595
C+L RG +LKL K IK+CT ALELN
Sbjct: 148 CYL--NRGVCFLKLGKCEETIKECTKALELN 176
>At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 208
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 503 CFLFAKRGQVYLKLNKPNACIKDCTHALELN 595
C+L RG +LKL K IK+CT ALELN
Sbjct: 148 CYL--NRGVCFLKLGKCEETIKECTKALELN 176
>At2g42810.1 68415.m05300 serine/threonine protein phosphatase,
putative similar to SP|P53042 Serine/threonine protein
phosphatase 5 (EC 3.1.3.16) (PP5) (Protein phosphatase
T) (PPT) {Rattus norvegicus}; contains Pfam profiles
PF00149: Ser/Thr protein phosphatase, PF00515: TPR
Domain
Length = 484
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 423 AMRAFSEQKYDEAINLYTAAIQLNPQSA 506
A AF KY AI+LYT AI+LN +A
Sbjct: 20 ANEAFKGHKYSSAIDLYTKAIELNSNNA 47
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 435 FSEQKYDEAINLYTAAIQLNPQSAFCLLNGDRC 533
F EQKY +A+ YT AI+ NP+ N C
Sbjct: 393 FKEQKYPDAVRHYTEAIKRNPKDPRAYSNRAAC 425
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 521 RGQVYLKLNKPNACIKDCTHALE 589
R V+L++ K + CIKDC A+E
Sbjct: 283 RAAVHLEMGKYDECIKDCDKAVE 305
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3
Query: 435 FSEQKYDEAINLYTAAIQLNP 497
F EQKY EAI YT AI+ NP
Sbjct: 394 FKEQKYPEAIKHYTEAIKRNP 414
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 521 RGQVYLKLNKPNACIKDCTHALE 589
R VYL++ K N CI+DC A+E
Sbjct: 284 RAAVYLEMGKYNECIEDCNKAVE 306
>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 530
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 435 FSEQKYDEAINLYTAAIQLNPQSAFCLLNGDRC 533
F EQKY EA+ Y+ AI+ NP N C
Sbjct: 380 FKEQKYPEAVKHYSEAIKRNPNDVRAYSNRAAC 412
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 521 RGQVYLKLNKPNACIKDCTHALE 589
R VYL++ K CI+DC A+E
Sbjct: 270 RAAVYLEMGKYEECIEDCDKAVE 292
>At5g51420.1 68418.m06375 long-chain-alcohol O-fatty-acyltransferase
family protein / wax synthase family protein contains
similarity to wax synthase wax synthase - Simmondsia
chinensis, PID:g5020219 similar to wax synthase
[gi:5020219] from Simmondsia chinensis
Length = 435
Score = 30.7 bits (66), Expect = 0.96
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 133 VIVAAVFYIFPQRISTGLIAQRCTGNSFFFVGFV-NRKNQSL 11
V+V A + FP + TG I QR + F+GFV N N+SL
Sbjct: 311 VVVTAGWLFFPPLVRTGKI-QRFANEALLFIGFVRNLFNESL 351
>At1g66550.1 68414.m07561 WRKY family transcription factor similar
to DNA-binding protein 3 [Nicotiana tabacum] GI:7406995
Length = 254
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 479 SHTIKSTECFLFAKRGQVYLKLNKPNACIKDCTHALELNCDS 604
S T+ + F + K GQ +K + C CT+A + NC++
Sbjct: 102 SRTMCPNDGFTWRKYGQKTIKASAHKRCYYRCTYAKDQNCNA 143
>At4g23570.2 68417.m03396 phosphatase-related low similarity to
phosphoprotein phosphatase [Mus musculus] GI:567040;
contains Pfam profiles PF00515: TPR Domain, PF05002: SGS
domain, PF04969: CS domain
Length = 350
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 423 AMRAFSEQKYDEAINLYTAAIQLNPQSA 506
A AF + +D A++LY+ AI L+P A
Sbjct: 9 AKEAFVDDDFDVAVDLYSKAIDLDPNCA 36
>At4g23570.1 68417.m03395 phosphatase-related low similarity to
phosphoprotein phosphatase [Mus musculus] GI:567040;
contains Pfam profiles PF00515: TPR Domain, PF05002: SGS
domain, PF04969: CS domain
Length = 350
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 423 AMRAFSEQKYDEAINLYTAAIQLNPQSA 506
A AF + +D A++LY+ AI L+P A
Sbjct: 9 AKEAFVDDDFDVAVDLYSKAIDLDPNCA 36
>At4g11260.1 68417.m01822 phosphatase-related low similarity to
protein phosphatase T [Saccharomyces cerevisiae]
GI:897806; contains Pfam profiles PF00515: TPR Domain,
PF05002: SGS domain, PF04969: CS domain
Length = 358
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 423 AMRAFSEQKYDEAINLYTAAIQLNPQSA 506
A AF + +D A++LY+ AI L+P A
Sbjct: 9 AKEAFLDDDFDVAVDLYSKAIDLDPNCA 36
>At1g61440.1 68414.m06923 S-locus protein kinase, putative contains
similarity to receptor protein kinase [Ipomoea trifida]
gi|836954|gb|AAC23542; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 792
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -1
Query: 663 EDSSKFTQEPICSPSEFVGALSQFNSKACVQSLIHAFGLFSFRYTCPRLANKKHSVDLIV 484
+D++ F P P +F + +++ C QS +H +F Y P + S DL+
Sbjct: 333 KDANVFHTVPNIKPPDFYEYANSVDAEGCYQSCLHNCSCLAFAY-IPGIGCLMWSKDLMD 391
Query: 483 WLQY 472
+Q+
Sbjct: 392 TMQF 395
>At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOAT)
family protein / wax synthase-related contains
similarity to wax synthase wax synthase - Simmondsia
chinensis, PID:g5020219 similar to wax synthase
[gi:5020219] from Simmondsia chinensis
Length = 345
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 133 VIVAAVFYIFPQRISTGLIAQRCTGNSFFFVGFVNRKNQSLAR 5
V++ + FP +G+I +R +F F+GFV K L R
Sbjct: 298 VVMTGGWLFFPHLARSGMI-ERLADEAFLFIGFVKHKFFYLCR 339
>At1g66560.1 68414.m07562 WRKY family transcription factor
Length = 249
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 479 SHTIKSTECFLFAKRGQVYLKLNKPNACIKDCTHALELNCDS 604
S T + + F + K GQ +K + C CT+A + NC++
Sbjct: 97 SPTPRPDDGFTWRKYGQKTIKTSPYQRCYYRCTYAKDQNCNA 138
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,461,292
Number of Sequences: 28952
Number of extensions: 253690
Number of successful extensions: 661
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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