Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021356
(697 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 24 1.4
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 24 1.4
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 3.2
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 3.2
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 3.2
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 3.2
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 5.5
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 7.3
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 9.6
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 9.6
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 9.6
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 9.6
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 343 QADHPRQVQRHHQVAGFQPTGRQG 272
Q HP+ Q HHQ G+QG
Sbjct: 172 QEQHPQHHQPHHQQQHMMYGGQQG 195
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 343 QADHPRQVQRHHQVAGFQPTGRQG 272
Q HP+ Q HHQ G+QG
Sbjct: 174 QEQHPQHHQPHHQQQHMMYGGQQG 197
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 264 HTPPCRPVGWNP 299
H PP PVG NP
Sbjct: 743 HQPPRNPVGTNP 754
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 264 HTPPCRPVGWNP 299
H PP PVG NP
Sbjct: 635 HQPPRNPVGTNP 646
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 636 RVACSN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQR 517
RV C G R R ++ RF+ E+ ++ +H+ R+R
Sbjct: 147 RVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRR 186
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 636 RVACSN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQR 517
RV C G R R ++ RF+ E+ ++ +H+ R+R
Sbjct: 206 RVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRR 245
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 399 SMKSTMEDEKLKEKISDSD 343
S+ S EDE+++ ++SD D
Sbjct: 18 SLLSKKEDEEVEHRLSDRD 36
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 156 PEPEVPPPGLEALAPPS 106
P P+VPP L + PP+
Sbjct: 176 PLPQVPPLPLPPIFPPT 192
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +1
Query: 346 RVRDLFLELLIL 381
RV+DLFLE ++L
Sbjct: 581 RVKDLFLEAVLL 592
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.0 bits (42), Expect = 9.6
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = -2
Query: 156 PEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHLVTS 37
P+ E+P P + + S+ PT T P L S
Sbjct: 73 PKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPS 112
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 471 KYRNEDDKQKETIQAKNALESY 406
++ N D Q+ + + NA ESY
Sbjct: 365 QFNNSDFVQRNSTEFDNATESY 386
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/39 (25%), Positives = 14/39 (35%)
Frame = -2
Query: 561 VHQQGEQDHHYQRQRSSLKEEIERMVNEAEKYRNEDDKQ 445
+H H Q++ EE+ MVN D Q
Sbjct: 306 LHSNDLNMHQQHHQQNMSHEELSAMVNRCHPLSLSSDHQ 344
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,143
Number of Sequences: 336
Number of extensions: 2949
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -