Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021354
         (673 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0RPR2 Cluster: Putative serine/threonine protein kinas...    36   0.89 
UniRef50_A2R3J4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_O43593 Cluster: Protein hairless; n=22; Theria|Rep: Pro...    34   3.6  
UniRef50_Q7R4E9 Cluster: GLP_49_117041_117631; n=1; Giardia lamb...    33   8.3  

>UniRef50_Q0RPR2 Cluster: Putative serine/threonine protein kinase;
           n=1; Frankia alni ACN14a|Rep: Putative serine/threonine
           protein kinase - Frankia alni (strain ACN14a)
          Length = 519

 Score = 35.9 bits (79), Expect = 0.89
 Identities = 27/54 (50%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = -3

Query: 620 GVRTDDDIIRLCGIVFCNADG---ERGACGPL--LPLKFP-PDVADEVLVRA*D 477
           GVRTD  + RL  + +    G    RG   PL  LPL FP PD  DEVLVRA D
Sbjct: 439 GVRTD--VFRLAAMAYHCLTGVTPARGGPAPLRGLPLPFPVPDTLDEVLVRALD 490


>UniRef50_A2R3J4 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus niger|Rep: Putative uncharacterized protein
           - Aspergillus niger
          Length = 370

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +2

Query: 527 AAVMARTRLSPRPHCRILYRTIL*CHRQSGHPLRPPLYRPPCTPRKQHQ 673
           AA + R+  +  P  + LY T+L C     H + PP Y PP  PRK H+
Sbjct: 267 AAPVHRSNGTTTPPNKHLYPTLLPC--TPSHLIIPPSYSPPPAPRKTHR 313


>UniRef50_O43593 Cluster: Protein hairless; n=22; Theria|Rep:
           Protein hairless - Homo sapiens (Human)
          Length = 1189

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 429 QGPTPCAALYSVLCQWRMRLMTMHVRIHDG-PPTTPAHPS 313
           +GP PC +L  +L    ++L   H RIH    P TPA PS
Sbjct: 750 RGPLPCPSLCELLASTAVKLCLGHERIHMAFAPVTPALPS 789


>UniRef50_Q7R4E9 Cluster: GLP_49_117041_117631; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_49_117041_117631 - Giardia lamblia
           ATCC 50803
          Length = 196

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +3

Query: 210 CDTPIILGEASVNVYF---HVKDADLPIQGRIWI 302
           C  P++LG   +N      H KD DLP++G  W+
Sbjct: 34  CSRPLLLGVGRINPLLSARHSKDPDLPVEGFTWV 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,878,501
Number of Sequences: 1657284
Number of extensions: 13039686
Number of successful extensions: 35156
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35129
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)