Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021354
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.2  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   3.8  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   5.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   6.6  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   8.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 614 RTDDDIIRLCGIVFCN 567
           R++D    LCG++FCN
Sbjct: 533 RSNDTTDALCGLIFCN 548


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 385 LAQHGVQCGAGRGPLWL 435
           LA+H V C   RG LW+
Sbjct: 356 LARHAVACFLTRGDLWI 372


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -3

Query: 647 ADGTVAA-GAGVRTDDDIIRLCGIVFCNADGERGACGPLLPLKFPPDVADEV 495
           A+G + A G+G   D  + ++  I +C+  G   ACG         D++D+V
Sbjct: 381 AEGRLNADGSG---DHGLFQISDIYWCSPPGNGWACGVSCDALKDSDISDDV 429


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 602 HRQSGHPLRPPLYRPP 649
           H  +GHPL P L  PP
Sbjct: 408 HSAAGHPLYPSLPYPP 423


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 544 HAPLSPSALQNTIPHNLIMSSSVRTPAPAATVPSAMHTSQTA 669
           ++P+SP      I  NL+ ++S   P PAAT  +A  T+  A
Sbjct: 463 NSPMSP------INFNLLSAASTAVPNPAATNATANSTTTGA 498


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 326 GVVGGPS*ILTCIVIRRIRHWH-STEY 403
           GVVG    I TCIVI R R  H +T Y
Sbjct: 59  GVVGN---ISTCIVIARNRSMHTATNY 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,641
Number of Sequences: 2352
Number of extensions: 13581
Number of successful extensions: 45
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)