Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021354
         (673 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067128-1|AAH67128.1| 1189|Homo sapiens hairless homolog (mouse...    34   0.53 
AJ277249-1|CAB87577.2| 1189|Homo sapiens hairless protein protein.     34   0.53 
AJ277165-1|CAB86602.1| 1189|Homo sapiens hairless protein protein.     34   0.53 
AF039196-1|AAC32258.3| 1189|Homo sapiens putative single zinc fi...    34   0.53 
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    31   5.0  
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             31   5.0  

>BC067128-1|AAH67128.1| 1189|Homo sapiens hairless homolog (mouse)
           protein.
          Length = 1189

 Score = 33.9 bits (74), Expect = 0.53
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 429 QGPTPCAALYSVLCQWRMRLMTMHVRIHDG-PPTTPAHPS 313
           +GP PC +L  +L    ++L   H RIH    P TPA PS
Sbjct: 750 RGPLPCPSLCELLASTAVKLCLGHERIHMAFAPVTPALPS 789


>AJ277249-1|CAB87577.2| 1189|Homo sapiens hairless protein protein.
          Length = 1189

 Score = 33.9 bits (74), Expect = 0.53
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 429 QGPTPCAALYSVLCQWRMRLMTMHVRIHDG-PPTTPAHPS 313
           +GP PC +L  +L    ++L   H RIH    P TPA PS
Sbjct: 750 RGPLPCPSLCELLASTAVKLCLGHERIHMAFAPVTPALPS 789


>AJ277165-1|CAB86602.1| 1189|Homo sapiens hairless protein protein.
          Length = 1189

 Score = 33.9 bits (74), Expect = 0.53
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 429 QGPTPCAALYSVLCQWRMRLMTMHVRIHDG-PPTTPAHPS 313
           +GP PC +L  +L    ++L   H RIH    P TPA PS
Sbjct: 750 RGPLPCPSLCELLASTAVKLCLGHERIHMAFAPVTPALPS 789


>AF039196-1|AAC32258.3| 1189|Homo sapiens putative single zinc
           finger transcription factor protein protein.
          Length = 1189

 Score = 33.9 bits (74), Expect = 0.53
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 429 QGPTPCAALYSVLCQWRMRLMTMHVRIHDG-PPTTPAHPS 313
           +GP PC +L  +L    ++L   H RIH    P TPA PS
Sbjct: 750 RGPLPCPSLCELLASTAVKLCLGHERIHMAFAPVTPALPS 789


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 550  PLSPSALQNTIPHNLIMSSSVRTPAPAATVPSAMHTSQTAP 672
            P   S  +N+ P +L+ SSSV +P+P  + PS    S   P
Sbjct: 9424 PSPLSVEKNSPPSSLVSSSSVTSPSPLYSTPSGSSHSSPVP 9464


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 550  PLSPSALQNTIPHNLIMSSSVRTPAPAATVPSAMHTSQTAP 672
            P   S  +N+ P +L+ SSSV +P+P  + PS    S   P
Sbjct: 1128 PSPLSVEKNSPPSSLVSSSSVTSPSPLYSTPSGSSHSSPVP 1168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,579,699
Number of Sequences: 237096
Number of extensions: 2119523
Number of successful extensions: 8388
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8383
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)